You are here

Home

CBS51388_003725-T1, CBS51388_003725-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003725-T1
Unique NameCBS51388_003725-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:2430346..2431371+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003725-T1 ID=CBS51388_003725-T1|Name=CBS51388_003725-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1026bp|location=Sequence derived from alignment at An04:2430346..2431371+ (Aspergillus niger CBS 513.88)
ATGCTCTACGTGAGTTTGAGTCTCACTCTCTGATGCATGAACCCCCAGGT
GTGTATTAAGCTAATCCTGCCTTGGCCTTTGTCTCTTTAGTACTTTCGTG
TTGGGTCGGTTTTGTATGGTATCTGCATTTTCTTTATCAAAGCATCCATC
CTATTGCAGCTGGTCGAGATCTTCTGTCACAGGAAGGACACCTTCTACTG
GTTCTGCCATACCGTGATTTGGATTAATTTCCTATTCTACGTGATCAGTA
CCTTCGTGGAGATCTTCTCCTGCCGTCCGATAGCGGCTGCGTGGGATGTT
CTGATCTCTGGCAAGTGCATGAACGTCCGTCTACTGAATGTGATTGCGAG
CTCAGTGAATGGTTTCTTCGATCTGATCATCTTGGTCCTGCCTCAAACCC
GCATCTGGCAACTTCAGATGGCTCTCCGCCGAAAGCTTGCCGTCTCGACC
GTCTTCCTATTCGGAATTCTGTACGTTTTTCCCTATGTGGCCGATTCTAA
TGGTTAGCATTCCTTCTCACATAAGCCGAGCAGAGCTTGTGCATCAGCTA
TCACGCGGCTTGCGTATGCCGTGCTACTATTTACGACGACCAACAACATT
GCCTACTACAGCTACATGGCCGGCCTATGGACCCTGCCCGAGTTGGTGGC
CGGTATCATCGCCGGATGTCTCCCTTCCTCCCCAAAGTTTTTCCAGAGGC
TGCGTCAGAACAAGATGATGACGAAGTGGGGGAGCTCGCTCCAAAATCTC
GTGGCCAGTCGTGGGGGCCCTTCGCACCGTCGCGGTCGCGGGGGCGGCGG
CCTTTCAGGCGATTCTTACATGATGGAGGTTCCCAAGGAGGGAAGCAAGA
TCAAGCAACAGCAACAGCAGCAGGAGCAGGAGCATCAGGAGCACGAGCGC
CATCGGCAGCGAAAAGGCCCACCGGACCAGTATCCGCTGACATCGTTCGC
CAGTGCACCAGGGACCATTGACCAGTCCACAAGTGATCTGTCTTACAGCG
CAGAACGGTTGGGGGAGGGTGTATGA
back to top

Coding sequence (CDS) from alignment at An04:2430346..2431371+

>CBS51388_003725-T1 ID=CBS51388_003725-T1|Name=CBS51388_003725-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2205bp|location=Sequence derived from alignment at An04:2430346..2431371+ (Aspergillus niger CBS 513.88)
ATGCTCTACCTGGTCGAGATCTTCTGTCACAGGAAGGACACCTTCTACTG
GTTCTGCCATACCGTGATTTGGATTAATTTCCTATTCTACGTGATCAGTA
CCTTCGTGGAGATCTTCTCCTGCCGTCCGATAGCGGCTGCGTGGGATGTT
CTGATCTCTGGCAAGTGCATGAACGTCCGTCTACTGAATGTGATTGCGAG
CTCAGTGAATGGTTTCTTCGATCTGATCATCTTGGTCCTGCCTCAAACCC
GCATCTGGCAACTTCAGATGGCTCTCCGCCGAAAGCTTGCCGTCTCGACC
GTCTTCCTATTCGGAATTCTCTACATGGCCGGCCTATGGACCCTGCCCGA
GTTGGTGGCCGGTATCATCGCCGGATGTCTCCCTTCCTCCCCAAAGTTTT
TCCAGAGGCTGCGTCAGAACAAGATGATGACGAAGTGGGGGAGCTCGCTC
CAAAATCTCGTGGCCAGTCGTGGGGGCCCTTCGCACCGTCGCGGTCGCGG
GGGCGGCGGCCTTTCAGGCGATTCTTACATGATGGAGGTTCCCAAGGAGG
GAAGCAAGATCAAGCAACAGCAACAGCAGCAGGAGCAGGAGCATCAGGAG
CACGAGCGCCATCGGCAGCGAAAAGGCCCACCGGACCAGTATCCGCTGAC
ATCGTTCGCCAGTGCACCAGGGACCATTGACCAGTCCACAAGTGATCTGT
CTTACAGCGCAGAACGGTTGGGGGAGGGTGTATGAATGCTCTACCTGGTC
GAGATCTTCTGTCACAGGAAGGACACCTTCTACTGGTTCTGCCATACCGT
GATTTGGATTAATTTCCTATTCTACGTGATCAGTACCTTCGTGGAGATCT
TCTCCTGCCGTCCGATAGCGGCTGCGTGGGATGTTCTGATCTCTGGCAAG
TGCATGAACGTCCGTCTACTGAATGTGATTGCGAGCTCAGTGAATGGTTT
CTTCGATCTGATCATCTTGGTCCTGCCTCAAACCCGCATCTGGCAACTTC
AGATGGCTCTCCGCCGAAAGCTTGCCGTCTCGACCGTCTTCCTATTCGGA
ATTCTCTACATGGCCGGCCTATGGACCCTGCCCGAGTTGGTGGCCGGTAT
CATCGCCGGATGTCTCCCTTCCTCCCCAAAGTTTTTCCAGAGGCTGCGTC
AGAACAAGATGATGACGAAGTGGGGGAGCTCGCTCCAAAATCTCGTGGCC
AGTCGTGGGGGCCCTTCGCACCGTCGCGGTCGCGGGGGCGGCGGCCTTTC
AGGCGATTCTTACATGATGGAGGTTCCCAAGGAGGGAAGCAAGATCAAGC
AACAGCAACAGCAGCAGGAGCAGGAGCATCAGGAGCACGAGCGCCATCGG
CAGCGAAAAGGCCCACCGGACCAGTATCCGCTGACATCGTTCGCCAGTGC
ACCAGGGACCATTGACCAGTCCACAAGTGATCTGTCTTACAGCGCAGAAC
GGTTGGGGGAGGGTGTATGAATGCTCTACCTGGTCGAGATCTTCTGTCAC
AGGAAGGACACCTTCTACTGGTTCTGCCATACCGTGATTTGGATTAATTT
CCTATTCTACGTGATCAGTACCTTCGTGGAGATCTTCTCCTGCCGTCCGA
TAGCGGCTGCGTGGGATGTTCTGATCTCTGGCAAGTGCATGAACGTCCGT
CTACTGAATGTGATTGCGAGCTCAGTGAATGGTTTCTTCGATCTGATCAT
CTTGGTCCTGCCTCAAACCCGCATCTGGCAACTTCAGATGGCTCTCCGCC
GAAAGCTTGCCGTCTCGACCGTCTTCCTATTCGGAATTCTCTACATGGCC
GGCCTATGGACCCTGCCCGAGTTGGTGGCCGGTATCATCGCCGGATGTCT
CCCTTCCTCCCCAAAGTTTTTCCAGAGGCTGCGTCAGAACAAGATGATGA
CGAAGTGGGGGAGCTCGCTCCAAAATCTCGTGGCCAGTCGTGGGGGCCCT
TCGCACCGTCGCGGTCGCGGGGGCGGCGGCCTTTCAGGCGATTCTTACAT
GATGGAGGTTCCCAAGGAGGGAAGCAAGATCAAGCAACAGCAACAGCAGC
AGGAGCAGGAGCATCAGGAGCACGAGCGCCATCGGCAGCGAAAAGGCCCA
CCGGACCAGTATCCGCTGACATCGTTCGCCAGTGCACCAGGGACCATTGA
CCAGTCCACAAGTGATCTGTCTTACAGCGCAGAACGGTTGGGGGAGGGTG
TATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003725CBS51388_003725Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003725-T1.exon1CBS51388_003725-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003725-T1.exon2CBS51388_003725-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003725-T1.exon3CBS51388_003725-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003725-T1.cdsCBS51388_003725-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003725-T1CBS51388_003725-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_4.9
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:2430346..2431371 +
Powered by Drupal