|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2448866..2450912+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003730-T1 ID=CBS51388_003730-T1|Name=CBS51388_003730-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2047bp|location=Sequence derived from alignment at An04:2448866..2450912+ (Aspergillus niger CBS 513.88)
ATGGCTGTCACCATGCATGATTCTGTCCTGGACAGCAACAAGGCCAACAT
GACCGGTTTCAAGGCCGAGGTCGTCGTTAAGAAGCTGGAATGCCCTTCCC
CAAAGCCTCCGGTTGACGACAACTTTATGTATGACTTCAAATATAATCAT
GTCTTACCAACTTCAGACGTTCTGGGGATCGAAACTCCCATGGACTGCGA
CGCCCAAAGGGAGGCCGAAGACATCGCGGCGCGGCTGTCGCAGGCAATGG
GAGCTCGGGATGCTCAGACATTTGCTGAGATGTTCCTTCCATACGGTGAG
ATCTAACTCTCCCCGTTCGTGCAGGCATCCTCTAACATGTCCTTCTCGGT
ACAGGCGTTTGGCGTGACAAGTTGTCCTTCACCTGGGATTACCGCACTTT
CAATTTTTACCCAGCAATCCTCAAGGCTGCCACGGACCTTTTCACTCAAA
CGAAAGCCACCAATTTCAAGTTCCTCACCCCGGCTCCCACGATTTCCCGG
CCCTATCCGGACTTTGCTCAACTGCAATTAGTTGTGTCCTTTGAGACTGA
AGTCGTGGTTTCTTCAGCCGTGATCAATGCAGTCTTCACCCAGGAGGGGT
GGAAGATTTACACAATGCACACCGTTGCAGAGAAGCTGAAACAGTTTCCC
GAACTTCCTCCACCCGACGGGCATATGACGGGTCCCGTTAGCTGGGAAAA
GCAAAGAACTGCGGAAATCGATGCTGCCAACCCTGAGATACTGATCATTG
GTGGCGGCCAGAAGTTAGTCTATCTCTTCCACGTCTCGATGAACCGTACT
GACCCTTTGTTTCCTTCAATAGTGGTCTCGCACTAGCCGCCAGATGCAAG
GCACTTGGTATGGATAGTCTCATAATCGAGCGCAGCGAAGAAATCGGCGA
TGTCTGGAAGAAGCGTTATGAGTACCTATCACTTCACTTCCCCCACTGGG
CTGATGATTTGCCTTACTTTCCATACCCCAAGCTTTGGCCCACGTACACA
CCCGCCCAGAAGCAAGGAATGTACATGAAGTGGTATGCGGAGGCCCTGGA
ATTGAATGTTTGGACCAAATCGGAGGTCGTGAAGGCAGAGCAAGACGACC
AGCATAACTGGACGGTCGTGATCAACAAAGAAGGTCAAGAAACCAGACAA
CTGCACCCCAAACAGGTCATCATGGCTACCTCCCTTTGCGGCGTCCCCAT
GACCCCAGAAATTCCTGGTATGGCCGATTTCAAGGCAGGTGTTATCCGCC
ACTCAACGGCCCACGACAGTGCGCGTGAATTTGTGGGTAAGAAGGTCTGT
GTCGTTGGTACCTCATCCTCTGGCTTCGATACGGCCTTCGATTGCTCCCG
CCGGGGCATCGATGTTACACTCCTTCAACGGTCCCCGACCTACATCATGT
CGCTGACCCACTCCGTCCCGCGCACGATCGGTAACTATGGTCCTGACGCC
GAAGGCAACCGGCCTAGCCATGAGGAACAAGACCGCCTTTTCTTTGCCAC
ACCTACTGGACCTGGGGAAGAGCTCGCCAGACGTAATGCCAAGGTGTTGG
AAGACCTTGACCGGCCTCTTCTGGATGCACTTCATGCTCGCGGTCTCCGG
ACCTGGCGTGGTCAGCGCGGCACGGGCGGTTCCACCCTCGGCCAGACCCG
GAACGGTGGCTTTTATTTCGATGCCGGTGCGTGTGAGCACATCATCAATG
GCAAGATCAAGGTAGAGCCAGGGTACATTGAGCGGTTCACGGAGGACAAG
GTAATCCTCAACGATGGGCGTGAGCGCCAATTCGACCTGATCGTCTTCGC
TACCGGCTTCTCCAACACGATTGACTCGGTCCGTGCCACTCTAGGTGACA
GGATCGCCGACCAATGCGGTCCTATCTGGGGTATTGATGAGGAGGGCGAG
TTCAAAACCGCGTACCGGGAGACTGGAGTGCCCAATCTCTGGCTCATGGT
CGGCTATCTCCCCTACACCCGCTTCCATTCCAAACTGCTTGCTATGCGTA
TAAAGGCTCTGATGGAAGGTATATCTCCGGCTCCATACAAGGACTAG back to topCoding sequence (CDS) from alignment at An04:2448866..2450912+ >CBS51388_003730-T1 ID=CBS51388_003730-T1|Name=CBS51388_003730-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5787bp|location=Sequence derived from alignment at An04:2448866..2450912+ (Aspergillus niger CBS 513.88)
ATGGCTGTCACCATGCATGATTCTGTCCTGGACAGCAACAAGGCCAACAT
GACCGGTTTCAAGGCCGAGGTCGTCGTTAAGAAGCTGGAATGCCCTTCCC
CAAAGCCTCCGGTTGACGACAACTTTATGTATGACTTCAAATATAATCAT
GTCTTACCAACTTCAGACGTTCTGGGGATCGAAACTCCCATGGACTGCGA
CGCCCAAAGGGAGGCCGAAGACATCGCGGCGCGGCTGTCGCAGGCAATGG
GAGCTCGGGATGCTCAGACATTTGCTGAGATGTTCCTTCCATACGGCGTT
TGGCGTGACAAGTTGTCCTTCACCTGGGATTACCGCACTTTCAATTTTTA
CCCAGCAATCCTCAAGGCTGCCACGGACCTTTTCACTCAAACGAAAGCCA
CCAATTTCAAGTTCCTCACCCCGGCTCCCACGATTTCCCGGCCCTATCCG
GACTTTGCTCAACTGCAATTAGTTGTGTCCTTTGAGACTGAAGTCGTGGT
TTCTTCAGCCGTGATCAATGCAGTCTTCACCCAGGAGGGGTGGAAGATTT
ACACAATGCACACCGTTGCAGAGAAGCTGAAACAGTTTCCCGAACTTCCT
CCACCCGACGGGCATATGACGGGTCCCGTTAGCTGGGAAAAGCAAAGAAC
TGCGGAAATCGATGCTGCCAACCCTGAGATACTGATCATTGGTGGCGGCC
AGAATGGTCTCGCACTAGCCGCCAGATGCAAGGCACTTGGTATGGATAGT
CTCATAATCGAGCGCAGCGAAGAAATCGGCGATGTCTGGAAGAAGCGTTA
TGAGTACCTATCACTTCACTTCCCCCACTGGGCTGATGATTTGCCTTACT
TTCCATACCCCAAGCTTTGGCCCACGTACACACCCGCCCAGAAGCAAGGA
ATGTACATGAAGTGGTATGCGGAGGCCCTGGAATTGAATGTTTGGACCAA
ATCGGAGGTCGTGAAGGCAGAGCAAGACGACCAGCATAACTGGACGGTCG
TGATCAACAAAGAAGGTCAAGAAACCAGACAACTGCACCCCAAACAGGTC
ATCATGGCTACCTCCCTTTGCGGCGTCCCCATGACCCCAGAAATTCCTGG
TATGGCCGATTTCAAGGCAGGTGTTATCCGCCACTCAACGGCCCACGACA
GTGCGCGTGAATTTGTGGGTAAGAAGGTCTGTGTCGTTGGTACCTCATCC
TCTGGCTTCGATACGGCCTTCGATTGCTCCCGCCGGGGCATCGATGTTAC
ACTCCTTCAACGGTCCCCGACCTACATCATGTCGCTGACCCACTCCGTCC
CGCGCACGATCGGTAACTATGGTCCTGACGCCGAAGGCAACCGGCCTAGC
CATGAGGAACAAGACCGCCTTTTCTTTGCCACACCTACTGGACCTGGGGA
AGAGCTCGCCAGACGTAATGCCAAGGTGTTGGAAGACCTTGACCGGCCTC
TTCTGGATGCACTTCATGCTCGCGGTCTCCGGACCTGGCGTGGTCAGCGC
GGCACGGGCGGTTCCACCCTCGGCCAGACCCGGAACGGTGGCTTTTATTT
CGATGCCGGTGCGTGTGAGCACATCATCAATGGCAAGATCAAGGTAGAGC
CAGGGTACATTGAGCGGTTCACGGAGGACAAGGTAATCCTCAACGATGGG
CGTGAGCGCCAATTCGACCTGATCGTCTTCGCTACCGGCTTCTCCAACAC
GATTGACTCGGTCCGTGCCACTCTAGGTGACAGGATCGCCGACCAATGCG
GTCCTATCTGGGGTATTGATGAGGAGGGCGAGTTCAAAACCGCGTACCGG
GAGACTGGAGTGCCCAATCTCTGGCTCATGGTCGGCTATCTCCCCTACAC
CCGCTTCCATTCCAAACTGCTTGCTATGCGTATAAAGGCTCTGATGGAAG
GTATATCTCCGGCTCCATACAAGGACTAGATGGCTGTCACCATGCATGAT
TCTGTCCTGGACAGCAACAAGGCCAACATGACCGGTTTCAAGGCCGAGGT
CGTCGTTAAGAAGCTGGAATGCCCTTCCCCAAAGCCTCCGGTTGACGACA
ACTTTATGTATGACTTCAAATATAATCATGTCTTACCAACTTCAGACGTT
CTGGGGATCGAAACTCCCATGGACTGCGACGCCCAAAGGGAGGCCGAAGA
CATCGCGGCGCGGCTGTCGCAGGCAATGGGAGCTCGGGATGCTCAGACAT
TTGCTGAGATGTTCCTTCCATACGGCGTTTGGCGTGACAAGTTGTCCTTC
ACCTGGGATTACCGCACTTTCAATTTTTACCCAGCAATCCTCAAGGCTGC
CACGGACCTTTTCACTCAAACGAAAGCCACCAATTTCAAGTTCCTCACCC
CGGCTCCCACGATTTCCCGGCCCTATCCGGACTTTGCTCAACTGCAATTA
GTTGTGTCCTTTGAGACTGAAGTCGTGGTTTCTTCAGCCGTGATCAATGC
AGTCTTCACCCAGGAGGGGTGGAAGATTTACACAATGCACACCGTTGCAG
AGAAGCTGAAACAGTTTCCCGAACTTCCTCCACCCGACGGGCATATGACG
GGTCCCGTTAGCTGGGAAAAGCAAAGAACTGCGGAAATCGATGCTGCCAA
CCCTGAGATACTGATCATTGGTGGCGGCCAGAATGGTCTCGCACTAGCCG
CCAGATGCAAGGCACTTGGTATGGATAGTCTCATAATCGAGCGCAGCGAA
GAAATCGGCGATGTCTGGAAGAAGCGTTATGAGTACCTATCACTTCACTT
CCCCCACTGGGCTGATGATTTGCCTTACTTTCCATACCCCAAGCTTTGGC
CCACGTACACACCCGCCCAGAAGCAAGGAATGTACATGAAGTGGTATGCG
GAGGCCCTGGAATTGAATGTTTGGACCAAATCGGAGGTCGTGAAGGCAGA
GCAAGACGACCAGCATAACTGGACGGTCGTGATCAACAAAGAAGGTCAAG
AAACCAGACAACTGCACCCCAAACAGGTCATCATGGCTACCTCCCTTTGC
GGCGTCCCCATGACCCCAGAAATTCCTGGTATGGCCGATTTCAAGGCAGG
TGTTATCCGCCACTCAACGGCCCACGACAGTGCGCGTGAATTTGTGGGTA
AGAAGGTCTGTGTCGTTGGTACCTCATCCTCTGGCTTCGATACGGCCTTC
GATTGCTCCCGCCGGGGCATCGATGTTACACTCCTTCAACGGTCCCCGAC
CTACATCATGTCGCTGACCCACTCCGTCCCGCGCACGATCGGTAACTATG
GTCCTGACGCCGAAGGCAACCGGCCTAGCCATGAGGAACAAGACCGCCTT
TTCTTTGCCACACCTACTGGACCTGGGGAAGAGCTCGCCAGACGTAATGC
CAAGGTGTTGGAAGACCTTGACCGGCCTCTTCTGGATGCACTTCATGCTC
GCGGTCTCCGGACCTGGCGTGGTCAGCGCGGCACGGGCGGTTCCACCCTC
GGCCAGACCCGGAACGGTGGCTTTTATTTCGATGCCGGTGCGTGTGAGCA
CATCATCAATGGCAAGATCAAGGTAGAGCCAGGGTACATTGAGCGGTTCA
CGGAGGACAAGGTAATCCTCAACGATGGGCGTGAGCGCCAATTCGACCTG
ATCGTCTTCGCTACCGGCTTCTCCAACACGATTGACTCGGTCCGTGCCAC
TCTAGGTGACAGGATCGCCGACCAATGCGGTCCTATCTGGGGTATTGATG
AGGAGGGCGAGTTCAAAACCGCGTACCGGGAGACTGGAGTGCCCAATCTC
TGGCTCATGGTCGGCTATCTCCCCTACACCCGCTTCCATTCCAAACTGCT
TGCTATGCGTATAAAGGCTCTGATGGAAGGTATATCTCCGGCTCCATACA
AGGACTAGATGGCTGTCACCATGCATGATTCTGTCCTGGACAGCAACAAG
GCCAACATGACCGGTTTCAAGGCCGAGGTCGTCGTTAAGAAGCTGGAATG
CCCTTCCCCAAAGCCTCCGGTTGACGACAACTTTATGTATGACTTCAAAT
ATAATCATGTCTTACCAACTTCAGACGTTCTGGGGATCGAAACTCCCATG
GACTGCGACGCCCAAAGGGAGGCCGAAGACATCGCGGCGCGGCTGTCGCA
GGCAATGGGAGCTCGGGATGCTCAGACATTTGCTGAGATGTTCCTTCCAT
ACGGCGTTTGGCGTGACAAGTTGTCCTTCACCTGGGATTACCGCACTTTC
AATTTTTACCCAGCAATCCTCAAGGCTGCCACGGACCTTTTCACTCAAAC
GAAAGCCACCAATTTCAAGTTCCTCACCCCGGCTCCCACGATTTCCCGGC
CCTATCCGGACTTTGCTCAACTGCAATTAGTTGTGTCCTTTGAGACTGAA
GTCGTGGTTTCTTCAGCCGTGATCAATGCAGTCTTCACCCAGGAGGGGTG
GAAGATTTACACAATGCACACCGTTGCAGAGAAGCTGAAACAGTTTCCCG
AACTTCCTCCACCCGACGGGCATATGACGGGTCCCGTTAGCTGGGAAAAG
CAAAGAACTGCGGAAATCGATGCTGCCAACCCTGAGATACTGATCATTGG
TGGCGGCCAGAATGGTCTCGCACTAGCCGCCAGATGCAAGGCACTTGGTA
TGGATAGTCTCATAATCGAGCGCAGCGAAGAAATCGGCGATGTCTGGAAG
AAGCGTTATGAGTACCTATCACTTCACTTCCCCCACTGGGCTGATGATTT
GCCTTACTTTCCATACCCCAAGCTTTGGCCCACGTACACACCCGCCCAGA
AGCAAGGAATGTACATGAAGTGGTATGCGGAGGCCCTGGAATTGAATGTT
TGGACCAAATCGGAGGTCGTGAAGGCAGAGCAAGACGACCAGCATAACTG
GACGGTCGTGATCAACAAAGAAGGTCAAGAAACCAGACAACTGCACCCCA
AACAGGTCATCATGGCTACCTCCCTTTGCGGCGTCCCCATGACCCCAGAA
ATTCCTGGTATGGCCGATTTCAAGGCAGGTGTTATCCGCCACTCAACGGC
CCACGACAGTGCGCGTGAATTTGTGGGTAAGAAGGTCTGTGTCGTTGGTA
CCTCATCCTCTGGCTTCGATACGGCCTTCGATTGCTCCCGCCGGGGCATC
GATGTTACACTCCTTCAACGGTCCCCGACCTACATCATGTCGCTGACCCA
CTCCGTCCCGCGCACGATCGGTAACTATGGTCCTGACGCCGAAGGCAACC
GGCCTAGCCATGAGGAACAAGACCGCCTTTTCTTTGCCACACCTACTGGA
CCTGGGGAAGAGCTCGCCAGACGTAATGCCAAGGTGTTGGAAGACCTTGA
CCGGCCTCTTCTGGATGCACTTCATGCTCGCGGTCTCCGGACCTGGCGTG
GTCAGCGCGGCACGGGCGGTTCCACCCTCGGCCAGACCCGGAACGGTGGC
TTTTATTTCGATGCCGGTGCGTGTGAGCACATCATCAATGGCAAGATCAA
GGTAGAGCCAGGGTACATTGAGCGGTTCACGGAGGACAAGGTAATCCTCA
ACGATGGGCGTGAGCGCCAATTCGACCTGATCGTCTTCGCTACCGGCTTC
TCCAACACGATTGACTCGGTCCGTGCCACTCTAGGTGACAGGATCGCCGA
CCAATGCGGTCCTATCTGGGGTATTGATGAGGAGGGCGAGTTCAAAACCG
CGTACCGGGAGACTGGAGTGCCCAATCTCTGGCTCATGGTCGGCTATCTC
CCCTACACCCGCTTCCATTCCAAACTGCTTGCTATGCGTATAAAGGCTCT
GATGGAAGGTATATCTCCGGCTCCATACAAGGACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.9 |
| Note | SMCOG1092:hypothetical protein |
| DBxref | InterPro:IPR032710 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13738 |
| DBxref | PFAM:PF07992 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2448866..2450912 + |
|
