CBS51388_003733-T1, CBS51388_003733-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_003733-T1
Unique Name	CBS51388_003733-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An04:2456370..2458039+
coding sequence from alignment at An04:2456370..2458039+

mRNA from alignment at An04:2456370..2458039+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_003733-T1 ID=CBS51388_003733-T1|Name=CBS51388_003733-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1670bp|location=Sequence derived from alignment at An04:2456370..2458039+ (Aspergillus niger CBS 513.88)
ATGCATCAAGTGTTGAAAGAGGATGGTACTACAGTGGAGCATGATGAGAG
AGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGG
ATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC
CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATC
AGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGA
GTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT
GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATG
GGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGA
CCTCGGCCCAAAATTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT
ATTGGGGTTGGTACACTGGCTATGGTATGGATGAATCTCCGGCCGAATGC
AACATATTGCTTGCTAATATATCTGGCTACTAGGGCGCACCGCTTTATAT
CTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGAAT
CCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGC
ATGAGATTAGTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCA
GATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATACT
CACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGT
CTGAGTCGGCTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGA
ATACAACGCAATCATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACAAC
AACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATG
GACCTATTCAGGCCGCAGACCTGGAAGAGGACAGCAGTCGGCGTGGGTGT
AGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGCGC
CCACGCTTTTCCAATTGATCGACCAGAAGGGCGAGATGTCATTGATCTTG
TCAGGTGTATTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTT
AACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTTCC
TGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGG
CCCGACTGGGCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTT
TCTTTACATCCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGCCT
TGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTA
TCAACTTGCGTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCC
GGTGATGATGGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGCGT
GCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACC
GGCAGAACACTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACA
AGCACACCATGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGGGG
AAGGGAGGCTTGACGTGTGA

Coding sequence (CDS) from alignment at An04:2456370..2458039+

>CBS51388_003733-T1 ID=CBS51388_003733-T1|Name=CBS51388_003733-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4698bp|location=Sequence derived from alignment at An04:2456370..2458039+ (Aspergillus niger CBS 513.88)
ATGCATCAAGTGTTGAAAGAGGATGGTACTACAGTGGAGCATGATGAGAG
AGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGG
ATGGCGTCAGAGGGCTTTTCAGCTCGGGCTTTGGGTATGACCAGGGAGTC
ATATCAGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCCGCAGGC
GGAGAGTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGG
CATTTGTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGG
AAATGGGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGCCGTTAT
CCAGACCTCGGCCCAAAATTACGGCATGCTGGTTGCCGGAAGAGCAATTG
GTGGTATTGGGGTTGGTACACTGGCTATGGGCGCACCGCTTTATATCTCA
GAAATTTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGAATCCAT
TTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGCATGA
GATTAGTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCAGATG
GTCAGTGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATACTCACC
ACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGTCTGA
GTCGGCTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGAATAC
AACGCAATCATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACAACAACA
GCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATGGACC
TATTCAGGCCGCAGACCTGGAAGAGGACAGCAGTCGGCGTGGGTGTAGGG
TTTTTCCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGCGCCCAC
GCTTTTCCAATTGATCGACCAGAAGGGCGAGATGTCATTGATCTTGTCAG
GTGTATTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTTAACA
ATCGACAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTTCCTGAT
GGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGGCCCG
ACTGGGCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTTTCTT
TACATCCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGCCTTGCC
TTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTATCAA
CTTGCGTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCCGGTG
ATGATGGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGCGTGCTG
TGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACCGGCA
GAACACTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACAAGCA
CACCATGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGGGGAAGG
GAGGCTTGACGTGTGAATGCATCAAGTGTTGAAAGAGGATGGTACTACAG
TGGAGCATGATGAGAGAGGCACCCTTGGTGTTGAAGCGGTGGATATGCTG
CCCTCATATGGCCCGGATGGCGTCAGAGGGCTTTTCAGCTCGGGCTTTGG
GTATGACCAGGGAGTCATATCAGTCATCAATGTCATGCCACAATTCCATG
CGGCTATCCCGCAGGCGGAGAGTGAATTTGGCAAAGGGTTTATGACAGGC
ATGCTACTCCTCGGGGCATTTGTCGGTTGTATCTTCATGCCTTATCTTGC
AGACAGGATCTCCAGGAAATGGGCCCTGACGGTGGTCGTTATCATTTTTG
ACATTGGGGCCGTTATCCAGACCTCGGCCCAAAATTACGGCATGCTGGTT
GCCGGAAGAGCAATTGGTGGTATTGGGGTTGGTACACTGGCTATGGGCGC
ACCGCTTTATATCTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTCT
TAGTGCTCGAATCCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGG
GTAACGTTCGGCATGAGATTAGTTGATAGTGAAGCTTCATTCCGTGTGCC
TTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCATT
TCTTCCCATACTCACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGAT
TGCCTCAAGAGTCTGAGTCGGCTGCGCGGCCTTCCATTGAGCGATCAGAA
AGTCCAAGCTGAATACAACGCAATCATCGGTGAGGTTAGAGCCCAGAAAC
TCATGGAACAACAACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCT
CTGATATGGATGGACCTATTCAGGCCGCAGACCTGGAAGAGGACAGCAGT
CGGCGTGGGTGTAGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTTA
TTTACTACGCGCCCACGCTTTTCCAATTGATCGACCAGAAGGGCGAGATG
TCATTGATCTTGTCAGGTGTATTCAATACCCTCCAGCTTCTCACTGTCCT
GGTTTGTTTCTTAACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATAC
TAGGCGGTTTCCTGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATG
GCTCTTTATGGGCCCGACTGGGCTAACCCATCGGCCGGTTGGGGCTGCGT
GGCGGTGGCCTTTCTTTACATCCTCATCTACGGGAACACATACTCGCCTC
TTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAA
GGGGTTGCGTTATCAACTTGCGTCAACTGGCTGTCCAATTTTATTGTTGG
GATCGTGACTCCGGTGATGATGGCTAATATTGGTTATGGCACATACGTCT
TTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTT
CCCGAGACAACCGGCAGAACACTGGAGCAGATTGACGAAGTTTTTGGCAA
TATTAGCAAACAAGCACACCATGAATTTATGAGGGAAACTACTTTCCAAG
CGGCTAGAGGGGAAGGGAGGCTTGACGTGTGAATGCATCAAGTGTTGAAA
GAGGATGGTACTACAGTGGAGCATGATGAGAGAGGCACCCTTGGTGTTGA
AGCGGTGGATATGCTGCCCTCATATGGCCCGGATGGCGTCAGAGGGCTTT
TCAGCTCGGGCTTTGGGTATGACCAGGGAGTCATATCAGTCATCAATGTC
ATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGAGTGAATTTGGCAA
AGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTTGTCGGTTGTATCT
TCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATGGGCCCTGACGGTG
GTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGACCTCGGCCCAAAA
TTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGTATTGGGGTTGGTA
CACTGGCTATGGGCGCACCGCTTTATATCTCAGAAATTTCACCACCAAAC
CTGCGGGGAACCCTCTTAGTGCTCGAATCCATTTGCCTCGTGTCCGGCGC
GGTCATAGCTTATTGGGTAACGTTCGGCATGAGATTAGTTGATAGTGAAG
CTTCATTCCGTGTGCCTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTT
GGGGTCGGTATCCATTTCTTCCCATACTCACCACGGTGGTTGGCGCTCGT
TGATCGGCAGGAGGATTGCCTCAAGAGTCTGAGTCGGCTGCGCGGCCTTC
CATTGAGCGATCAGAAAGTCCAAGCTGAATACAACGCAATCATCGGTGAG
GTTAGAGCCCAGAAACTCATGGAACAACAACAGCGCCCGGGCGTGACTGG
CATCAAGCGAGAGGCTCTGATATGGATGGACCTATTCAGGCCGCAGACCT
GGAAGAGGACAGCAGTCGGCGTGGGTGTAGGGTTTTTCCAACAATTCTCG
GGGGTCAATGCGTTTATTTACTACGCGCCCACGCTTTTCCAATTGATCGA
CCAGAAGGGCGAGATGTCATTGATCTTGTCAGGTGTATTCAATACCCTCC
AGCTTCTCACTGTCCTGGTTTGTTTCTTAACAATCGACAAAGTTGGTCGG
CGCCCCTTGGCGATACTAGGCGGTTTCCTGATGGGAGCCTGCTATATTAT
CATTGCCGTGCTGATGGCTCTTTATGGGCCCGACTGGGCTAACCCATCGG
CCGGTTGGGGCTGCGTGGCGGTGGCCTTTCTTTACATCCTCATCTACGGG
AACACATACTCGCCTCTTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCAA
TGCACTTCGTTCGAAAGGGGTTGCGTTATCAACTTGCGTCAACTGGCTGT
CCAATTTTATTGTTGGGATCGTGACTCCGGTGATGATGGCTAATATTGGT
TATGGCACATACGTCTTTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGTG
GGCCTTTTTTCTGGTTCCCGAGACAACCGGCAGAACACTGGAGCAGATTG
ACGAAGTTTTTGGCAATATTAGCAAACAAGCACACCATGAATTTATGAGG
GAAACTACTTTCCAAGCGGCTAGAGGGGAAGGGAGGCTTGACGTGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_003733	CBS51388_003733	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_003733-T1.exon1	CBS51388_003733-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_003733-T1.exon2	CBS51388_003733-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_003733-T1.exon3	CBS51388_003733-T1.exon3	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_003733-T1.cds	CBS51388_003733-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_003733-T1	CBS51388_003733-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_4.9
Note	SMCOG1169:sugar transport protein
DBxref	InterPro:IPR036259
DBxref	InterPro:IPR020846
DBxref	InterPro:IPR005829
DBxref	InterPro:IPR005828
DBxref	InterPro:IPR003663
DBxref	PFAM:PF00083
DBxref	PFAM:PF07690
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An04	supercontig	An04:2456370..2458039 +

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CBS51388_003733-T1, CBS51388_003733-T1 (mRNA) Aspergillus niger CBS 513.88