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Sequences
The following sequences are available for this feature:
mRNA from alignment at An05:80439..81305+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003772-T1 ID=CBS51388_003772-T1|Name=CBS51388_003772-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=867bp|location=Sequence derived from alignment at An05:80439..81305+ (Aspergillus niger CBS 513.88)
ATGGCGGAACAGGTATAGATCATCTCTGCCTGAATTCGTCAAGAACATAG
GTCAGCTAAGTTGTAACAGGAATCCAAAGTGCATGGCCATGCCGATGCAG
ACGGTCACTTCCGGCGCAAGGAGTCCGCCTTCCGCTCGACCGTATCTTCG
GATCCTGATGCGGAATTTCCTGCTGAAAAGGACCGCTATGTCTTGTACCT
GACCTACGGATGTCCGTGGGCGCATCGTACTAACCTGGTTCGATCTCTCA
AGGGCCTAGAGGATATCATCCAGCTCGTGGTTTTGGACCCCGAGCTGGGG
CCCGAAGGTTGGTTCTTTTCTGGCCGATGGGGGTCCGCTGAAAAAGATCC
CTTGTATGGGTTCACAAAGTTGAGCCAATTCTATTTTAAGGCCGAGCCGG
ACTATGAAGGGCGCTATACCGTTCCGATGCTCTGGGATAAGAGAAAGGAA
ACGATCGTGAACAACGAGAGTGCCGAGATCATCAGAATGCTTTACACAGA
GTTCGACCAACTTCTGCCGGAGGAGCTGCGTGAGGCCAACCGGCCTGGAG
GGGGTTTCTACCCGGCACATCTGAGGTCAGAGATTGACGCAATGAATGAG
TGGGTGTATCACAAGATTAACAATGGAGTGTACAAAACCGGATTCGCCAC
AACGCAGGAGGCTTATGACGCGAATGTGTATCCACTGTTCGAGGCCCTGG
ACCGCGTTGAGCAGCACCTGGCACATCCAGGCCATCAGCCATACCTGTTT
GGGGAGAATATCACGGAGGCGGACATTCGACTGTACACAACCATTTGTCG
GTTCGATGTAGCCTACTACCTGATCTTCCGCTGCAACCTCAAGATGATCC
GGCATGATATCCGCTGA back to topCoding sequence (CDS) from alignment at An05:80439..81305+ >CBS51388_003772-T1 ID=CBS51388_003772-T1|Name=CBS51388_003772-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1620bp|location=Sequence derived from alignment at An05:80439..81305+ (Aspergillus niger CBS 513.88)
ATGGCGGAACAGGAATCCAAAGTGCATGGCCATGCCGATGCAGACGGTCA
CTTCCGGCGCAAGGAGTCCGCCTTCCGCTCGACCGTATCTTCGGATCCTG
ATGCGGAATTTCCTGCTGAAAAGGACCGCTATGTCTTGTACCTGACCTAC
GGATGTCCGTGGGCGCATCGTACTAACCTGGTTCGATCTCTCAAGGGCCT
AGAGGATATCATCCAGCTCGTGGTTTTGGACCCCGAGCTGGGGCCCGAAG
GTTGGTTCTTTTCTGGCCGATGGGGGTCCGCTGAAAAAGATCCCTTGTAT
GGGTTCACAAAGTTGAGCCAATTCTATTTTAAGGCCGAGCCGGACTATGA
AGGGCGCTATACCGTTCCGATGCTCTGGGATAAGAGAAAGGAAACGATCG
TGAACAACGAGAGTGCCGAGATCATCAGAATGCTTTACACAGAGTTCGAC
CAACTTCTGCCGGAGGAGCTGCGTGAGGCCAACCGGCCTGGAGGGGGTTT
CTACCCGGCACATCTGAGGTCAGAGATTGACGCAATGAATGAGTGGGTGT
ATCACAAGATTAACAATGGAGTGTACAAAACCGGATTCGCCACAACGCAG
GAGGCTTATGACGCGAATGTGTATCCACTGTTCGAGGCCCTGGACCGCGT
TGAGCAGCACCTGGCACATCCAGGCCATCAGCCATACCTGTTTGGGGAGA
ATATCACGGAGGCGGACATTCGACTGTACACAACCATTTGTCGGTTCGAT
GTAGCCTACTACCTGATCTTCCGCTGCAACCTCAAGATGATCCGGCATGA
TATCCGCTGAATGGCGGAACAGGAATCCAAAGTGCATGGCCATGCCGATG
CAGACGGTCACTTCCGGCGCAAGGAGTCCGCCTTCCGCTCGACCGTATCT
TCGGATCCTGATGCGGAATTTCCTGCTGAAAAGGACCGCTATGTCTTGTA
CCTGACCTACGGATGTCCGTGGGCGCATCGTACTAACCTGGTTCGATCTC
TCAAGGGCCTAGAGGATATCATCCAGCTCGTGGTTTTGGACCCCGAGCTG
GGGCCCGAAGGTTGGTTCTTTTCTGGCCGATGGGGGTCCGCTGAAAAAGA
TCCCTTGTATGGGTTCACAAAGTTGAGCCAATTCTATTTTAAGGCCGAGC
CGGACTATGAAGGGCGCTATACCGTTCCGATGCTCTGGGATAAGAGAAAG
GAAACGATCGTGAACAACGAGAGTGCCGAGATCATCAGAATGCTTTACAC
AGAGTTCGACCAACTTCTGCCGGAGGAGCTGCGTGAGGCCAACCGGCCTG
GAGGGGGTTTCTACCCGGCACATCTGAGGTCAGAGATTGACGCAATGAAT
GAGTGGGTGTATCACAAGATTAACAATGGAGTGTACAAAACCGGATTCGC
CACAACGCAGGAGGCTTATGACGCGAATGTGTATCCACTGTTCGAGGCCC
TGGACCGCGTTGAGCAGCACCTGGCACATCCAGGCCATCAGCCATACCTG
TTTGGGGAGAATATCACGGAGGCGGACATTCGACTGTACACAACCATTTG
TCGGTTCGATGTAGCCTACTACCTGATCTTCCGCTGCAACCTCAAGATGA
TCCGGCATGATATCCGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR004045 |
| DBxref | PFAM:PF13409 |
| DBxref | PFAM:PF13410 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An05 | supercontig | An05:80439..81305 + |
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