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CBS51388_003933-T1, CBS51388_003933-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003933-T1
Unique NameCBS51388_003933-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An05:551244..552869-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003933-T1 ID=CBS51388_003933-T1|Name=CBS51388_003933-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1626bp|location=Sequence derived from alignment at An05:551244..552869- (Aspergillus niger CBS 513.88)
ATGCCTCACTCAGAAACCCCTCAAGAGCAAACGATTGCCAGTGCCGACGT
GACGAGCGGCGCTCAGGGCGTACGTATACGTATACATTAGTTTCAGAGAG
TATGCTAATATCCAAACCAGCAACAAACCCAGATTCGGGTCCTAGTCGCC
TGCCCTCGTTCGGGCTCCACACTCTTCATGCGTATCTTTCGCGAACTCCC
TCGTTGTGCGGTTACGAGTCGCTTGATTCTGCAAGGCAACTACCACAAAT
TCAGCGACCAAACTCTAGCTCGAATAAAGCCCGACTACACCATCTTCTCT
CATCCAGAAGCCCATCCCGTCTACCACCAAGCGGTGTCGGAAGGCTTTAC
CACTCTGGTCACGAAAGAGGAATTGGGTCACGAGTTCTTCAAGGGTGAAT
GCGACTTCAACATCCTGCCCAATCGAGCAGCCTACGAGATGACGCGGCCC
GCGTTTCTTGTCCGGGACCCAGTGCGCGTCTTTGATAGCTGGAAAAATAT
GGGCTGGGGCGACCTATACAGCTTTTTCATTTGCTATCGTTCACTTTTCA
GAATGCTCAATGCTAGCCCAGCACCACAAGTTGTCCTGTATGAGCAATTG
GTGGCCGACCCCAGAGACACAGTAATCGCACTGGCACAGTACTGGGGCAT
CGCATACGATGAAGGCTGTTTGGAATTTAGGCAGCCGTTTGGGGATTACC
TATTCAACGGTGACCGAGAACAATCGATCTATCAGGGTGCCGTTCCTGCC
GGCCTCTTCAACCGCGTCAAGTCCCACACTCATGTTGAAGACTTCCAGGG
CCATGGTCTGCTATCCGCACTGGAAATTGAACATATCGAAGCCGAAGTAG
GCGGCCTGTACCTTGAGGCTTATGGCTCACAGCTAGACCCCATTTCAAGT
CTTCTCTTCAAAAAGACGTGGTTTGGTTTCGATCTAGATGACACACTGCA
CGAGTTTCGCAAGGCGTCTGCCCATGCATCCCAATCAGTCTTCGCGGCAA
TTCGAGTCAACCATCCCGAGACCAAAGACACAATTGACGATCTCCAGGCG
ACCTATCGTGACATCCTTCGGTCAAATTCTTCAAATGCGTTCACAGATGG
AAAGTCATCCGAAGATTACCGCAGTGATAGATTTCAACGTTTGCTCGAAG
CCCACGGGCATGAGCCTTCCCGGGTAGAAGTGGAAGAGCTGTTGGCAATA
TACAAAAGCAGTCTCCGTGCCGCCCTGACACTGAAGGCTGGGGCACTTCG
TCTCCTACAGAAGCTCAAGTCCCATGGGAAGAAAGTTATTATAATCACCG
AGGGTCCACAAGATGCACAGGAATGGACGGTGTCAGAGCTTGGGTTACAG
CCATTCATAGATATCCTCGTCACCACCAATGAGGTCGGAGTGTCCAAGGT
GGATGGTCTATTTTCCGCTGTTCTGGAAAAACATAGCATCGTCCCAACTG
ACATGGTCTATGTTGGGGATAGCGAACAGCGTGACATCGGACCAGCACGG
GCTGCAGGGATGGATACTGTCTTGTATGACGAGAAGAGCAACTGTCGGCT
TCGAGACCCTCACAGCCTGCGGCTAAACTCACTCCCAAAATTAGAGTACC
TCATGGGCCGTCATGAAGGTGCCTAA
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Coding sequence (CDS) from alignment at An05:551244..552869-

>CBS51388_003933-T1 ID=CBS51388_003933-T1|Name=CBS51388_003933-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3150bp|location=Sequence derived from alignment at An05:551244..552869- (Aspergillus niger CBS 513.88)
CAACAAACCCAGATTCGGGTCCTAGTCGCCTGCCCTCGTTCGGGCTCCAC
ACTCTTCATGCGTATCTTTCGCGAACTCCCTCGTTGTGCGGTTACGAGTC
GCTTGATTCTGCAAGGCAACTACCACAAATTCAGCGACCAAACTCTAGCT
CGAATAAAGCCCGACTACACCATCTTCTCTCATCCAGAAGCCCATCCCGT
CTACCACCAAGCGGTGTCGGAAGGCTTTACCACTCTGGTCACGAAAGAGG
AATTGGGTCACGAGTTCTTCAAGGGTGAATGCGACTTCAACATCCTGCCC
AATCGAGCAGCCTACGAGATGACGCGGCCCGCGTTTCTTGTCCGGGACCC
AGTGCGCGTCTTTGATAGCTGGAAAAATATGGGCTGGGGCGACCTATACA
GCTTTTTCATTTGCTATCGTTCACTTTTCAGAATGCTCAATGCTAGCCCA
GCACCACAAGTTGTCCTGTATGAGCAATTGGTGGCCGACCCCAGAGACAC
AGTAATCGCACTGGCACAGTACTGGGGCATCGCATACGATGAAGGCTGTT
TGGAATTTAGGCAGCCGTTTGGGGATTACCTATTCAACGGTGACCGAGAA
CAATCGATCTATCAGGGTGCCGTTCCTGCCGGCCTCTTCAACCGCGTCAA
GTCCCACACTCATGTTGAAGACTTCCAGGGCCATGGTCTGCTATCCGCAC
TGGAAATTGAACATATCGAAGCCGAAGTAGGCGGCCTGTACCTTGAGGCT
TATGGCTCACAGCTAGACCCCATTTCAAGTCTTCTCTTCAAAAAGACGTG
GTTTGGTTTCGATCTAGATGACACACTGCACGAGTTTCGCAAGGCGTCTG
CCCATGCATCCCAATCAGTCTTCGCGGCAATTCGAGTCAACCATCCCGAG
ACCAAAGACACAATTGACGATCTCCAGGCGACCTATCGTGACATCCTTCG
GTCAAATTCTTCAAATGCGTTCACAGATGGAAAGTCATCCGAAGATTACC
GCAGTGATAGATTTCAACGTTTGCTCGAAGCCCACGGGCATGAGCCTTCC
CGGGTAGAAGTGGAAGAGCTGTTGGCAATATACAAAAGCAGTCTCCGTGC
CGCCCTGACACTGAAGGCTGGGGCACTTCGTCTCCTACAGAAGCTCAAGT
CCCATGGGAAGAAAGTTATTATAATCACCGAGGGTCCACAAGATGCACAG
GAATGGACGGTGTCAGAGCTTGGGTTACAGCCATTCATAGATATCCTCGT
CACCACCAATGAGGTCGGAGTGTCCAAGGTGGATGGTCTATTTTCCGCTG
TTCTGGAAAAACATAGCATCGTCCCAACTGACATGGTCTATGTTGGGGAT
AGCGAACAGCGTGACATCGGACCAGCACGGGCTGCAGGGATGGATACTGT
CTTGTATGACGAGAAGAGCAACTGTCGGCTTCGAGACCCTCACAGCCTGC
GGCTAAACTCACTCCCAAAATTAGAGTACCTCATGGGCCGTCATGAAGGT
GCCTAAATGCCTCACTCAGAAACCCCTCAAGAGCAAACGATTGCCAGTGC
CGACGTGACGAGCGGCGCTCAGGGCCAACAAACCCAGATTCGGGTCCTAG
TCGCCTGCCCTCGTTCGGGCTCCACACTCTTCATGCGTATCTTTCGCGAA
CTCCCTCGTTGTGCGGTTACGAGTCGCTTGATTCTGCAAGGCAACTACCA
CAAATTCAGCGACCAAACTCTAGCTCGAATAAAGCCCGACTACACCATCT
TCTCTCATCCAGAAGCCCATCCCGTCTACCACCAAGCGGTGTCGGAAGGC
TTTACCACTCTGGTCACGAAAGAGGAATTGGGTCACGAGTTCTTCAAGGG
TGAATGCGACTTCAACATCCTGCCCAATCGAGCAGCCTACGAGATGACGC
GGCCCGCGTTTCTTGTCCGGGACCCAGTGCGCGTCTTTGATAGCTGGAAA
AATATGGGCTGGGGCGACCTATACAGCTTTTTCATTTGCTATCGTTCACT
TTTCAGAATGCTCAATGCTAGCCCAGCACCACAAGTTGTCCTGTATGAGC
AATTGGTGGCCGACCCCAGAGACACAGTAATCGCACTGGCACAGTACTGG
GGCATCGCATACGATGAAGGCTGTTTGGAATTTAGGCAGCCGTTTGGGGA
TTACCTATTCAACGGTGACCGAGAACAATCGATCTATCAGGGTGCCGTTC
CTGCCGGCCTCTTCAACCGCGTCAAGTCCCACACTCATGTTGAAGACTTC
CAGGGCCATGGTCTGCTATCCGCACTGGAAATTGAACATATCGAAGCCGA
AGTAGGCGGCCTGTACCTTGAGGCTTATGGCTCACAGCTAGACCCCATTT
CAAGTCTTCTCTTCAAAAAGACGTGGTTTGGTTTCGATCTAGATGACACA
CTGCACGAGTTTCGCAAGGCGTCTGCCCATGCATCCCAATCAGTCTTCGC
GGCAATTCGAGTCAACCATCCCGAGACCAAAGACACAATTGACGATCTCC
AGGCGACCTATCGTGACATCCTTCGGTCAAATTCTTCAAATGCGTTCACA
GATGGAAAGTCATCCGAAGATTACCGCAGTGATAGATTTCAACGTTTGCT
CGAAGCCCACGGGCATGAGCCTTCCCGGGTAGAAGTGGAAGAGCTGTTGG
CAATATACAAAAGCAGTCTCCGTGCCGCCCTGACACTGAAGGCTGGGGCA
CTTCGTCTCCTACAGAAGCTCAAGTCCCATGGGAAGAAAGTTATTATAAT
CACCGAGGGTCCACAAGATGCACAGGAATGGACGGTGTCAGAGCTTGGGT
TACAGCCATTCATAGATATCCTCGTCACCACCAATGAGGTCGGAGTGTCC
AAGGTGGATGGTCTATTTTCCGCTGTTCTGGAAAAACATAGCATCGTCCC
AACTGACATGGTCTATGTTGGGGATAGCGAACAGCGTGACATCGGACCAG
CACGGGCTGCAGGGATGGATACTGTCTTGTATGACGAGAAGAGCAACTGT
CGGCTTCGAGACCCTCACAGCCTGCGGCTAAACTCACTCCCAAAATTAGA
GTACCTCATGGGCCGTCATGAAGGTGCCTAAATGCCTCACTCAGAAACCC
CTCAAGAGCAAACGATTGCCAGTGCCGACGTGACGAGCGGCGCTCAGGGC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003933CBS51388_003933Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003933-T1CBS51388_003933-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003933-T1.cdsCBS51388_003933-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003933-T1.exon2CBS51388_003933-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003933-T1.exon1CBS51388_003933-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR023214
DBxrefInterPro:IPR041492
DBxrefInterPro:IPR023198
DBxrefPFAM:PF13242
DBxrefPFAM:PF00702
DBxrefPFAM:PF13419
DBxrefPFAM:PF12710
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An05supercontigAn05:551244..552869 -
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