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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:201730..203709+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004014-T1 ID=CBS51388_004014-T1|Name=CBS51388_004014-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1980bp|location=Sequence derived from alignment at An06:201730..203709+ (Aspergillus niger CBS 513.88)
ATGCTGACCTCCCCATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTC
CACACTTGACTCCGATCTTCCACCCTTCGATATCAACATATCTTCCGGAA
TTCCAATATCTACCGGTGCAGTGGAAACGGAGGAAGAAACCGATCCCAGT
ACAGCTACGCGCTTGTGAGACGTGTAGCCAACGCGACAGCTAACATGACC
TCGTCCAGCAGGCGAGATCACTCATATTTACCCCGGAGCAGACCTCGTGC
CCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCTCGTGAGGCGGGCA
CTATCTTATCGTAAGCTTCTTTGTCGCGCAGGACAGTTTTACCAAGCTCA
CTGCACTAGGATTTGCGATCATGACGCCTCGTGTACTTCCATCGCGCAAT
GTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAACGACCA
GGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGGATTA
ATGGTTTGTTCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGAGGTC
GTACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGATCAATGA
AGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTGGCGG
TCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATGGTCC
AAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAGACGT
TCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCACAAGA
TTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCTTGCA
GCCGCCGCATTCTAGTAAGCCACGTCTCTCATCACCCACGATTAGAAACT
GAAAATCGCCTTAGCCGAGTACTAGTAAATTCGACACTACTGCTCTCCCC
TCCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAG
AAAAGCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAACGTC
CTCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATGGACT
AAGAGCCTACACAGCAAATATCGACGACTATATTTCTGGACGCAGTCCAT
CCTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTATCAT
CTGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATATCCGA
AGTCTGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACATTTCCAC
TTTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACAGTCT
GAGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGAACATGG
CGATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGG
ACAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTT
GTCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGAT
ACTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTG
AAGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCT
TTATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCG
ATCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCA
GAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCA
AGGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACG
ACGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATG
GTGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAA
TTGAGATCCTCCCAGGCTGGTTGCAGTTAG back to topCoding sequence (CDS) from alignment at An06:201730..203709+ >CBS51388_004014-T1 ID=CBS51388_004014-T1|Name=CBS51388_004014-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7248bp|location=Sequence derived from alignment at An06:201730..203709+ (Aspergillus niger CBS 513.88)
ATGCTGACCTCCCCATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTC
CACACTTGACTCCGATCTTCCACCCTTCGATATCAACATATCTTCCGGAA
TTCCAATATCTACCGGTGCAGTGGAAACGGAGGAAGAAACCGATCCCAGT
ACAGCTACGCGCTTGCGAGATCACTCATATTTACCCCGGAGCAGACCTCG
TGCCCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCTCGATTTGCGA
TCATGACGCCTCGTGTACTTCCATCGCGCAATGTGTCTAATCCGTATCTC
CAATACTGGTTTCCTATGTCACTGAACGACCAGGCGACATTTAAGGCTAT
CGTACTATCCTCTCTATCTCATGAGCGGATTAATGGTTTGTTCTCAGCAA
ACATGGCTAGCCTGACATCGACCAAAGAGGTCGTACCGTATTTGAAACAA
TACTACTTGGATACGATAACTTCGATCAATGAAGCACTACACGATTCTGC
TCGAGCAACTGCTGATGCGACTATCTTGGCGGTCTTGATGATGGTCGAAA
AGCCATTGCTTCAGGATCATAATGAATGGTCCAAGCGGTCTCCATTCCAG
GCACCTCTCCATGGATTACAGTGGTTAGACGTTCACAGTGCTAGAGAGCC
CAATCTGGTCCACCAGATGGGTCTTCACAAGATTATATCCTTGAGGGGTG
GCCTTGCTCAAGTCAAGACCCCCGGTCTTGCAGCCGCCGCATTCTACCGA
GTACTAGTAAATTCGACACTACTGCTCTCCCCTCCGCCGCTTCCTTTCGT
CGCACTGTCTGGCCAGAACGCATCCGAGATAGAAAAGCACTTGCTCCTTG
GCACCATGAACCTAGTCAATCGCTTAAACGTCCTCAACAAACTCCCTCTC
GAGTCGGAACTCCGACAAGTGATGCATGGACTAAGAGCCTACACAGCAAA
TATCGACGACTATATTTCTGGACGCAGTCCATCCTACAGTCCCCAGGCAA
TGTGTGACCAGCGCAATTTAGTCCAGTATCATCTGATGAGCATAGGGCCC
ATTGCCGGCACAGGACTTGGGGCTATATCCGAAGTCTGTCGACTAGCGAC
AATTATCTACAGCATCGGAGTGACATTTCCACTTTCTGGCGTCCGAGCTC
CTTTTGGAACTCTGGCCATGACATTACAGTCTGAGTTAGAAAAGAATGAT
CTTCTCAACAACTGGCCGATCCTGGAACATGGCGATATCCTGTTTCTGTG
GATCCTGATGGTGGGCGGTATAGCAGCTAGGGACAGTCCCGGAAGAGGCT
GGTTCATCGAGTGCTTGTCTGAGATTATGTTTGTCTCAGAGAACGTGCAG
TGGAGCTGCGTGAAAGAAAAGCTACAGATGATACTTTGGCTAGACATTGC
TTGCGATATGGCGGGCAGAGACGTCTGGAGTGAAGCCCACTCTCTTCTGC
AAAATCGAGCGCAAAGGGCAAAATCAGTCCCTTTATCGCCTAGAGCAAAC
CAGAAGTTGAAGGCACCTTGTGCCCACTGTCGATCAAAGAAGATTAAGTG
CGATAAGGATGATCCTTGTCAGAATTGTGTCAGAAGTGGGCTGAGCTGCG
GCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCAAGGGTGCACGTGTTCTCC
ATGCGACAGAAGCCGTGTGATCTGTGTCGACGACGGAGGGTGCGATGTGA
TAAGGAGAAGCCGTGCAAGCGCTGCAAAGATGGTGGCTTCAGATGCGTTT
ACAGAGAAGACCAATGGGTTGAAAGCTTGGAATTGAGATCCTCCCAGGCT
GGTTGCAGTTAGATGCTGACCTCCCCATTGGATGCATCTCCTTTCAAAAT
CATGGAGAGCTCCACACTTGACTCCGATCTTCCACCCTTCGATATCAACA
TATCTTCCGGAATTCCAATATCTACCGGTGCAGTGGAAACGGAGGAAGAA
ACCGATCCCAGTACAGCTACGCGCTTGCGAGATCACTCATATTTACCCCG
GAGCAGACCTCGTGCCCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGG
CTCGATTTGCGATCATGACGCCTCGTGTACTTCCATCGCGCAATGTGTCT
AATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAACGACCAGGCGAC
ATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGGATTAATGGTT
TGTTCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGAGGTCGTACCG
TATTTGAAACAATACTACTTGGATACGATAACTTCGATCAATGAAGCACT
ACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTGGCGGTCTTGA
TGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATGGTCCAAGCGG
TCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAGACGTTCACAG
TGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCACAAGATTATAT
CCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCTTGCAGCCGCC
GCATTCTACCGAGTACTAGTAAATTCGACACTACTGCTCTCCCCTCCGCC
GCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAGAAAAGC
ACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAACGTCCTCAAC
AAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATGGACTAAGAGC
CTACACAGCAAATATCGACGACTATATTTCTGGACGCAGTCCATCCTACA
GTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTATCATCTGATG
AGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATATCCGAAGTCTG
TCGACTAGCGACAATTATCTACAGCATCGGAGTGACATTTCCACTTTCTG
GCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACAGTCTGAGTTA
GAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGAACATGGCGATAT
CCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGGACAGTC
CCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTTGTCTCA
GAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGATACTTTG
GCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTGAAGCCC
ACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCTTTATCG
CCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCGATCAAA
GAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCAGAAGTG
GGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCAAGGGTG
CACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACGACGGAG
GGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATGGTGGCT
TCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAATTGAGA
TCCTCCCAGGCTGGTTGCAGTTAGATGCTGACCTCCCCATTGGATGCATC
TCCTTTCAAAATCATGGAGAGCTCCACACTTGACTCCGATCTTCCACCCT
TCGATATCAACATATCTTCCGGAATTCCAATATCTACCGGTGCAGTGGAA
ACGGAGGAAGAAACCGATCCCAGTACAGCTACGCGCTTGCGAGATCACTC
ATATTTACCCCGGAGCAGACCTCGTGCCCTTAGACGTCTTCCCGTCTTCT
CTTCCACGACGGCTCGATTTGCGATCATGACGCCTCGTGTACTTCCATCG
CGCAATGTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAA
CGACCAGGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGC
GGATTAATGGTTTGTTCTCAGCAAACATGGCTAGCCTGACATCGACCAAA
GAGGTCGTACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGAT
CAATGAAGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCT
TGGCGGTCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAA
TGGTCCAAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTT
AGACGTTCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTC
ACAAGATTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGT
CTTGCAGCCGCCGCATTCTACCGAGTACTAGTAAATTCGACACTACTGCT
CTCCCCTCCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCG
AGATAGAAAAGCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTA
AACGTCCTCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCA
TGGACTAAGAGCCTACACAGCAAATATCGACGACTATATTTCTGGACGCA
GTCCATCCTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAG
TATCATCTGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTAT
ATCCGAAGTCTGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACAT
TTCCACTTTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTA
CAGTCTGAGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGA
ACATGGCGATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAG
CTAGGGACAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATT
ATGTTTGTCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACA
GATGATACTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCT
GGAGTGAAGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCA
GTCCCTTTATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCA
CTGTCGATCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATT
GTGTCAGAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTC
CAGGCAAGGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTG
TCGACGACGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCA
AAGATGGTGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGC
TTGGAATTGAGATCCTCCCAGGCTGGTTGCAGTTAGATGCTGACCTCCCC
ATTGGATGCATCTCCTTTCAAAATCATGGAGAGCTCCACACTTGACTCCG
ATCTTCCACCCTTCGATATCAACATATCTTCCGGAATTCCAATATCTACC
GGTGCAGTGGAAACGGAGGAAGAAACCGATCCCAGTACAGCTACGCGCTT
GCGAGATCACTCATATTTACCCCGGAGCAGACCTCGTGCCCTTAGACGTC
TTCCCGTCTTCTCTTCCACGACGGCTCGATTTGCGATCATGACGCCTCGT
GTACTTCCATCGCGCAATGTGTCTAATCCGTATCTCCAATACTGGTTTCC
TATGTCACTGAACGACCAGGCGACATTTAAGGCTATCGTACTATCCTCTC
TATCTCATGAGCGGATTAATGGTTTGTTCTCAGCAAACATGGCTAGCCTG
ACATCGACCAAAGAGGTCGTACCGTATTTGAAACAATACTACTTGGATAC
GATAACTTCGATCAATGAAGCACTACACGATTCTGCTCGAGCAACTGCTG
ATGCGACTATCTTGGCGGTCTTGATGATGGTCGAAAAGCCATTGCTTCAG
GATCATAATGAATGGTCCAAGCGGTCTCCATTCCAGGCACCTCTCCATGG
ATTACAGTGGTTAGACGTTCACAGTGCTAGAGAGCCCAATCTGGTCCACC
AGATGGGTCTTCACAAGATTATATCCTTGAGGGGTGGCCTTGCTCAAGTC
AAGACCCCCGGTCTTGCAGCCGCCGCATTCTACCGAGTACTAGTAAATTC
GACACTACTGCTCTCCCCTCCGCCGCTTCCTTTCGTCGCACTGTCTGGCC
AGAACGCATCCGAGATAGAAAAGCACTTGCTCCTTGGCACCATGAACCTA
GTCAATCGCTTAAACGTCCTCAACAAACTCCCTCTCGAGTCGGAACTCCG
ACAAGTGATGCATGGACTAAGAGCCTACACAGCAAATATCGACGACTATA
TTTCTGGACGCAGTCCATCCTACAGTCCCCAGGCAATGTGTGACCAGCGC
AATTTAGTCCAGTATCATCTGATGAGCATAGGGCCCATTGCCGGCACAGG
ACTTGGGGCTATATCCGAAGTCTGTCGACTAGCGACAATTATCTACAGCA
TCGGAGTGACATTTCCACTTTCTGGCGTCCGAGCTCCTTTTGGAACTCTG
GCCATGACATTACAGTCTGAGTTAGAAAAGAATGATCTTCTCAACAACTG
GCCGATCCTGGAACATGGCGATATCCTGTTTCTGTGGATCCTGATGGTGG
GCGGTATAGCAGCTAGGGACAGTCCCGGAAGAGGCTGGTTCATCGAGTGC
TTGTCTGAGATTATGTTTGTCTCAGAGAACGTGCAGTGGAGCTGCGTGAA
AGAAAAGCTACAGATGATACTTTGGCTAGACATTGCTTGCGATATGGCGG
GCAGAGACGTCTGGAGTGAAGCCCACTCTCTTCTGCAAAATCGAGCGCAA
AGGGCAAAATCAGTCCCTTTATCGCCTAGAGCAAACCAGAAGTTGAAGGC
ACCTTGTGCCCACTGTCGATCAAAGAAGATTAAGTGCGATAAGGATGATC
CTTGTCAGAATTGTGTCAGAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCC
AGTGCGGCTTTCCAGGCAAGGGTGCACGTGTTCTCCATGCGACAGAAGCC
GTGTGATCTGTGTCGACGACGGAGGGTGCGATGTGATAAGGAGAAGCCGT
GCAAGCGCTGCAAAGATGGTGGCTTCAGATGCGTTTACAGAGAAGACCAA
TGGGTTGAAAGCTTGGAATTGAGATCCTCCCAGGCTGGTTGCAGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:201730..203709 + |
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