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CBS51388_004025-T1, CBS51388_004025-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004025-T1
Unique NameCBS51388_004025-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An06:225506..226629-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004025-T1 ID=CBS51388_004025-T1|Name=CBS51388_004025-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1124bp|location=Sequence derived from alignment at An06:225506..226629- (Aspergillus niger CBS 513.88)
ATGACTAATGACACTGGATATGAAGGCAAACGACAAGCTGAGCTAGAACA
GTTGCGAATGCAAAATTTGGCCAATAAACAGCAAGAACGCCCCGAGGAGA
GGCGGAATGAGGAGACTATGGCCGCCGACAACAAGTCGGGTCAAAGCTGT
CCACCAACGGTGGGAGACGGTGTGACTGATGAACAAACAAATACAACAGC
GGGGTCTGATATGTCAGTTGATTCAACTATTGGAATGCACAACTCCCCGG
TTGAACCCCTAGCGGTAATTGCACCTGACAAGTTGTCATGGCATCAAGAT
GGATATGTCGGTGGAGGCTTGGATTTGAGCCCAAGCACGTTGACTGGGTA
TGATAAGATGAATGATTCAATCACAACCTTTCTCCTTGACCCGGAATTGG
ATCTGCCACGGGATAGCAGCACGCCCAAGTTAACCTCTATTAATCCCACG
TCCGCCAGCACCCCTCAAGCCCGCAGCAATCCACTTCTGCACCAGGAGAG
CGCTATACGAACCACACGATCAAAATTCGAAGTCCGCCAGAGAGTCTGTA
AGGCTCAGGCGACAAATTGCGGAGTGATTCGACATCAGTGTAAGGAAGGG
CTGCCCACTGTTCGAATGAACGTTCCCACGAACCTGTCGGCCATGATGGA
GATATGGGACAATGGCAGCCTGCTACACAAATACAGCTCAGAAAGCCAGG
GCAAGACAGCCCTCCACATAAGTGCCGAGCGTGGCGACGTTGGAATTGTG
CAGTTTCTCCTTATTCAAGGGGTAGACGTCAATTGCGCAGACGGGTGGGG
ACGTACTGCATTGCATTATGCGGTACGAGCTGCGCATGTTGATATTGTCA
CGCAGTTGCTTGCAGCGGGCGCCGAAATCGGGGCTCGCGATCATCATGGC
CAAAGCCCACTGCATGTCGCAGTGGATGTGGGTTCCGAGGTGATCGTGCG
ACTGCTAGCAGACGAGGGCGCAGACCTCAATGCCCCCATCGATATCCCAA
ACTATATACGTGAGGGAGCGTGATATCTTCGTGTGAGGATCCTTCAGGCT
GAATGCGCTTCTATGTTTCTTTGGGAACGATATACTTTCCTATAGCCCGA
GAGGAAGCACAATGGACATCGTGA
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Coding sequence (CDS) from alignment at An06:225506..226629-

>CBS51388_004025-T1 ID=CBS51388_004025-T1|Name=CBS51388_004025-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2076bp|location=Sequence derived from alignment at An06:225506..226629- (Aspergillus niger CBS 513.88)
CCCGAGAGGAAGCACAATGGACATCGTGAATGACTAATGACACTGGATAT
GAAGGCAAACGACAAGCTGAGCTAGAACAGTTGCGAATGCAAAATTTGGC
CAATAAACAGCAAGAACGCCCCGAGGAGAGGCGGAATGAGGAGACTATGG
CCGCCGACAACAAGTCGGGTCAAAGCTGTCCACCAACGGTGGGAGACGGT
GTGACTGATGAACAAACAAATACAACAGCGGGGTCTGATATGTCAGTTGA
TTCAACTATTGGAATGCACAACTCCCCGGTTGAACCCCTAGCGGTAATTG
CACCTGACAAGTTGTCATGGCATCAAGATGGATATGTCGGTGGAGGCTTG
GATTTGAGCCCAAGCACGTTGACTGGGTATGATAAGATGAATGATTCAAT
CACAACCTTTCTCCTTGACCCGGAATTGGATCTGCCACGGGATAGCAGCA
CGCCCAAGTTAACCTCTATTAATCCCACGTCCGCCAGCACCCCTCAAGCC
CGCAGCAATCCACTTCTGCACCAGGAGAGCGCTATACGAACCACACGATC
AAAATTCGAAGTCCGCCAGAGAGTCTGTAAGGCTCAGGCGACAAATTGCG
GAGTGATTCGACATCAGTGTAAGGAAGGGCTGCCCACTGTTCGAATGAAC
GTTCCCACGAACCTGTCGGCCATGATGGAGATATGGGACAATGGCAGCCT
GCTACACAAATACAGCTCAGAAAGCCAGGGCAAGACAGCCCTCCACATAA
GTGCCGAGCGTGGCGACGTTGGAATTGTGCAGTTTCTCCTTATTCAAGGG
GTAGACGTCAATTGCGCAGACGGGTGGGGACGTACTGCATTGCATTATGC
GGTACGAGCTGCGCATGTTGATATTGTCACGCAGTTGCTTGCAGCGGGCG
CCGAAATCGGGGCTCGCGATCATCATGGCCAAAGCCCACTGCATGTCGCA
GTGGATGTGGGTTCCGAGGTGATCGTGCGACTGCTAGCAGACGAGGGCGC
AGACCTCAATGCCCCCATCGATATCCCAAACTATATACCCCGAGAGGAAG
CACAATGGACATCGTGAATGACTAATGACACTGGATATGAAGGCAAACGA
CAAGCTGAGCTAGAACAGTTGCGAATGCAAAATTTGGCCAATAAACAGCA
AGAACGCCCCGAGGAGAGGCGGAATGAGGAGACTATGGCCGCCGACAACA
AGTCGGGTCAAAGCTGTCCACCAACGGTGGGAGACGGTGTGACTGATGAA
CAAACAAATACAACAGCGGGGTCTGATATGTCAGTTGATTCAACTATTGG
AATGCACAACTCCCCGGTTGAACCCCTAGCGGTAATTGCACCTGACAAGT
TGTCATGGCATCAAGATGGATATGTCGGTGGAGGCTTGGATTTGAGCCCA
AGCACGTTGACTGGGTATGATAAGATGAATGATTCAATCACAACCTTTCT
CCTTGACCCGGAATTGGATCTGCCACGGGATAGCAGCACGCCCAAGTTAA
CCTCTATTAATCCCACGTCCGCCAGCACCCCTCAAGCCCGCAGCAATCCA
CTTCTGCACCAGGAGAGCGCTATACGAACCACACGATCAAAATTCGAAGT
CCGCCAGAGAGTCTGTAAGGCTCAGGCGACAAATTGCGGAGTGATTCGAC
ATCAGTGTAAGGAAGGGCTGCCCACTGTTCGAATGAACGTTCCCACGAAC
CTGTCGGCCATGATGGAGATATGGGACAATGGCAGCCTGCTACACAAATA
CAGCTCAGAAAGCCAGGGCAAGACAGCCCTCCACATAAGTGCCGAGCGTG
GCGACGTTGGAATTGTGCAGTTTCTCCTTATTCAAGGGGTAGACGTCAAT
TGCGCAGACGGGTGGGGACGTACTGCATTGCATTATGCGGTACGAGCTGC
GCATGTTGATATTGTCACGCAGTTGCTTGCAGCGGGCGCCGAAATCGGGG
CTCGCGATCATCATGGCCAAAGCCCACTGCATGTCGCAGTGGATGTGGGT
TCCGAGGTGATCGTGCGACTGCTAGCAGACGAGGGCGCAGACCTCAATGC
CCCCATCGATATCCCAAACTATATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004025CBS51388_004025Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004025-T1CBS51388_004025-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004025-T1.cdsCBS51388_004025-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004025-T1.exon2CBS51388_004025-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004025-T1.exon1CBS51388_004025-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An06supercontigAn06:225506..226629 -
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