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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:229634..230809+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004026-T1 ID=CBS51388_004026-T1|Name=CBS51388_004026-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1176bp|location=Sequence derived from alignment at An06:229634..230809+ (Aspergillus niger CBS 513.88)
ATGGCAACAGATTCACTTCCCACAAGTCTGTCCCATGCGTTAGGCTCTAC
GCTCTTGAGCACGCGTCAATGTGTCGTGCAACTTCCCTCAGATATCGCGG
TCGGCTCTGGTATGTATTGAAATGCATGGGCTCTAGTTGTGGGCGAAGAC
TAACTATGTTATAGTTATTATTGGTGGATTTACAGCCTGCATTATGACCA
AATATGCTCTCCATCATGCCTCCCAACACCCCGAACTGCAGAACCAGGTT
GACCTTCGCTACTCTGAAGTTCACTTCCACCGTCCGATATTTGCCTCAAC
GTCAATTACCCTGACCTTGCGAGAGGTGCATATCTCCAAAGAAGGGTCTA
CCCTTTATGTCGAATCACTCCAGAATGGCAAACTCACCACTTCTGCTCAT
ATCAGGTATGTGGACTGTATTTACATCACGAGAAACAAATGCTTATACCC
ATGATGATCAGAATCACCAAACCATCAGTCGCAGGTATCACGCTTCCAGT
AGATTGGCGTCTATCCCCTAAGCCCTGCCCAGTCGACCTTACGAAACTCG
AGACAGACAATGACCCCAACTGGATCTCCTACCACTGCGCCTTCTACCCC
ACAGGATTCCGAAGAGGTCAGTCTTACGCCAAGAACTTCATCCCGAGGGC
ACTGCCCACCGAGTTCGCATACATTGAGCAATGGGTTGAACCTGGCTGGG
ACTATCTTCCACTAGGCTCTCGGCCCTCTGGAACCGGCCAAGGCAAGGCA
AGGTGGACCAATGACATGATACAATTCGTGGGAGACATGGCCCTTCCTAT
TCAGGAGAACTATATGCCACATGAAGAGGGGGAGCCGTTGCCGCTGGGGA
GCATAGCGGCCACGCTCGAATTTGCGAAGCGCCAGGAGAAGGCCCGCAAT
GAATCACGGAGCGATTGGAGAGTTCTCGATGATGACGGCAGCAACGAATT
TCGGGGCAAAGTGCTGAATGTCTCCTTGACTCTCTCTACGGACATCAAGC
AAAAGCTTCCCCCTGAGGGTGTCCGATGGCTCTATCTGCGGACTGAATGC
AAGAAAATTATGAATGGCCAGATGGATATGCAGGTTCTCATTTTTAATGA
AAGGATGGATCTCATTGCTATCAGTCGTCAAGTGGCGGTTCTTGTTCCCG
CGAAGTCGAAGATTCAGAAGTTGTGA back to topCoding sequence (CDS) from alignment at An06:229634..230809+ >CBS51388_004026-T1 ID=CBS51388_004026-T1|Name=CBS51388_004026-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3195bp|location=Sequence derived from alignment at An06:229634..230809+ (Aspergillus niger CBS 513.88)
ATGGCAACAGATTCACTTCCCACAAGTCTGTCCCATGCGTTAGGCTCTAC
GCTCTTGAGCACGCGTCAATGTGTCGTGCAACTTCCCTCAGATATCGCGG
TCGGCTCTGTTATTATTGGTGGATTTACAGCCTGCATTATGACCAAATAT
GCTCTCCATCATGCCTCCCAACACCCCGAACTGCAGAACCAGGTTGACCT
TCGCTACTCTGAAGTTCACTTCCACCGTCCGATATTTGCCTCAACGTCAA
TTACCCTGACCTTGCGAGAGGTGCATATCTCCAAAGAAGGGTCTACCCTT
TATGTCGAATCACTCCAGAATGGCAAACTCACCACTTCTGCTCATATCAG
AATCACCAAACCATCAGTCGCAGGTATCACGCTTCCAGTAGATTGGCGTC
TATCCCCTAAGCCCTGCCCAGTCGACCTTACGAAACTCGAGACAGACAAT
GACCCCAACTGGATCTCCTACCACTGCGCCTTCTACCCCACAGGATTCCG
AAGAGGTCAGTCTTACGCCAAGAACTTCATCCCGAGGGCACTGCCCACCG
AGTTCGCATACATTGAGCAATGGGTTGAACCTGGCTGGGACTATCTTCCA
CTAGGCTCTCGGCCCTCTGGAACCGGCCAAGGCAAGGCAAGGTGGACCAA
TGACATGATACAATTCGTGGGAGACATGGCCCTTCCTATTCAGGAGAACT
ATATGCCACATGAAGAGGGGGAGCCGTTGCCGCTGGGGAGCATAGCGGCC
ACGCTCGAATTTGCGAAGCGCCAGGAGAAGGCCCGCAATGAATCACGGAG
CGATTGGAGAGTTCTCGATGATGACGGCAGCAACGAATTTCGGGGCAAAG
TGCTGAATGTCTCCTTGACTCTCTCTACGGACATCAAGCAAAAGCTTCCC
CCTGAGGGTGTCCGATGGCTCTATCTGCGGACTGAATGCAAGAAAATTAT
GAATGGCCAGATGGATATGCAGGTTCTCATTTTTAATGAAAGGATGGATC
TCATTGCTATCAGTCGTCAAGTGGCGGTTCTTGTTCCCGCGAAGTCGAAG
ATTCAGAAGTTGTGAATGGCAACAGATTCACTTCCCACAAGTCTGTCCCA
TGCGTTAGGCTCTACGCTCTTGAGCACGCGTCAATGTGTCGTGCAACTTC
CCTCAGATATCGCGGTCGGCTCTGTTATTATTGGTGGATTTACAGCCTGC
ATTATGACCAAATATGCTCTCCATCATGCCTCCCAACACCCCGAACTGCA
GAACCAGGTTGACCTTCGCTACTCTGAAGTTCACTTCCACCGTCCGATAT
TTGCCTCAACGTCAATTACCCTGACCTTGCGAGAGGTGCATATCTCCAAA
GAAGGGTCTACCCTTTATGTCGAATCACTCCAGAATGGCAAACTCACCAC
TTCTGCTCATATCAGAATCACCAAACCATCAGTCGCAGGTATCACGCTTC
CAGTAGATTGGCGTCTATCCCCTAAGCCCTGCCCAGTCGACCTTACGAAA
CTCGAGACAGACAATGACCCCAACTGGATCTCCTACCACTGCGCCTTCTA
CCCCACAGGATTCCGAAGAGGTCAGTCTTACGCCAAGAACTTCATCCCGA
GGGCACTGCCCACCGAGTTCGCATACATTGAGCAATGGGTTGAACCTGGC
TGGGACTATCTTCCACTAGGCTCTCGGCCCTCTGGAACCGGCCAAGGCAA
GGCAAGGTGGACCAATGACATGATACAATTCGTGGGAGACATGGCCCTTC
CTATTCAGGAGAACTATATGCCACATGAAGAGGGGGAGCCGTTGCCGCTG
GGGAGCATAGCGGCCACGCTCGAATTTGCGAAGCGCCAGGAGAAGGCCCG
CAATGAATCACGGAGCGATTGGAGAGTTCTCGATGATGACGGCAGCAACG
AATTTCGGGGCAAAGTGCTGAATGTCTCCTTGACTCTCTCTACGGACATC
AAGCAAAAGCTTCCCCCTGAGGGTGTCCGATGGCTCTATCTGCGGACTGA
ATGCAAGAAAATTATGAATGGCCAGATGGATATGCAGGTTCTCATTTTTA
ATGAAAGGATGGATCTCATTGCTATCAGTCGTCAAGTGGCGGTTCTTGTT
CCCGCGAAGTCGAAGATTCAGAAGTTGTGAATGGCAACAGATTCACTTCC
CACAAGTCTGTCCCATGCGTTAGGCTCTACGCTCTTGAGCACGCGTCAAT
GTGTCGTGCAACTTCCCTCAGATATCGCGGTCGGCTCTGTTATTATTGGT
GGATTTACAGCCTGCATTATGACCAAATATGCTCTCCATCATGCCTCCCA
ACACCCCGAACTGCAGAACCAGGTTGACCTTCGCTACTCTGAAGTTCACT
TCCACCGTCCGATATTTGCCTCAACGTCAATTACCCTGACCTTGCGAGAG
GTGCATATCTCCAAAGAAGGGTCTACCCTTTATGTCGAATCACTCCAGAA
TGGCAAACTCACCACTTCTGCTCATATCAGAATCACCAAACCATCAGTCG
CAGGTATCACGCTTCCAGTAGATTGGCGTCTATCCCCTAAGCCCTGCCCA
GTCGACCTTACGAAACTCGAGACAGACAATGACCCCAACTGGATCTCCTA
CCACTGCGCCTTCTACCCCACAGGATTCCGAAGAGGTCAGTCTTACGCCA
AGAACTTCATCCCGAGGGCACTGCCCACCGAGTTCGCATACATTGAGCAA
TGGGTTGAACCTGGCTGGGACTATCTTCCACTAGGCTCTCGGCCCTCTGG
AACCGGCCAAGGCAAGGCAAGGTGGACCAATGACATGATACAATTCGTGG
GAGACATGGCCCTTCCTATTCAGGAGAACTATATGCCACATGAAGAGGGG
GAGCCGTTGCCGCTGGGGAGCATAGCGGCCACGCTCGAATTTGCGAAGCG
CCAGGAGAAGGCCCGCAATGAATCACGGAGCGATTGGAGAGTTCTCGATG
ATGACGGCAGCAACGAATTTCGGGGCAAAGTGCTGAATGTCTCCTTGACT
CTCTCTACGGACATCAAGCAAAAGCTTCCCCCTGAGGGTGTCCGATGGCT
CTATCTGCGGACTGAATGCAAGAAAATTATGAATGGCCAGATGGATATGC
AGGTTCTCATTTTTAATGAAAGGATGGATCTCATTGCTATCAGTCGTCAA
GTGGCGGTTCTTGTTCCCGCGAAGTCGAAGATTCAGAAGTTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029069 |
| DBxref | PFAM:PF13622 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:229634..230809 + |
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