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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:263287..264079+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004038-T1 ID=CBS51388_004038-T1|Name=CBS51388_004038-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=793bp|location=Sequence derived from alignment at An06:263287..264079+ (Aspergillus niger CBS 513.88)
ATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGGTGTGTTT
ATGACGAGCATGGTTCTGAGCTCGCTTTCTATCCTACGTTTCTACCCTGT
CTTTATTTACTTTGCTCTTTTTTTTTTTGTCCTTTTCCTCCTCCCCGTCT
GGTTTTTATACTTGAAGGGCACCTGAGATGTTCTGTCGTTGGATACGGTT
AGTGGTTGCGTGAGCTAACCTGACATTCTTTTACGCAGCGTATGCAAACT
GACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACAATGTCATGAC
CTGGTAAGCTGATCCAGTCACACCTAATGTCGGCCTTTGAGTCCCTAACC
TTTGTTACGTCTAGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTT
TGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAA
ACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTC
TACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCC
AACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAGGTACGGACCCT
TGCAATCAGGGTAAAGCTGAAGAAAGATGAAACACGAAACATGCTAACGA
GTGTTTTACTGGCTTGTAGTCTGTTGAACGATCCCAACACATCATCTCCG
GCGAATGTAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACAT
CAAGCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAG back to topCoding sequence (CDS) from alignment at An06:263287..264079+ >CBS51388_004038-T1 ID=CBS51388_004038-T1|Name=CBS51388_004038-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1824bp|location=Sequence derived from alignment at An06:263287..264079+ (Aspergillus niger CBS 513.88)
ATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGCGTATGCA
AACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACAATGTCA
TGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTTGAAGAT
GGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAACAAGCC
TCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCTACGGTA
CGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCAACCTAT
GACGTGGCAGCCATCCTGACCAGTATTCAGAGTCTGTTGAACGATCCCAA
CACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTTACAAAGACAACC
GGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAG
GACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGCG
TATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACA
ATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTT
GAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAA
CAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCT
ACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCA
ACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAGTCTGTTGAACGA
TCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTTACAAAG
ACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAGAAGAGC
TGGGAGGACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTT
CAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGG
CGGACAATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCTGATACT
CCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTA
CCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCA
ACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGG
AGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAGTCTGTT
GAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTT
ACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAG
AAGAGCTGGGAGGACTAGATGTCGACCTCTGCCCGCCGTCGTCTCATGCG
CGACTTCAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTC
CTGTGGCGGACAATGTCATGACCTGGAACGCCGTCATCATCGGCCCCGCT
GATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGA
GCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCC
ACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAAC
CGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAG
TCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAA
ACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACC
GTCGAGAAGAGCTGGGAGGACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023313 |
| DBxref | InterPro:IPR000608 |
| DBxref | InterPro:IPR016135 |
| DBxref | PFAM:PF00179 |
| Product | Ubiquitin-conjugating enzyme E2 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:263287..264079 + |
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