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CBS51388_004045-T1, CBS51388_004045-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004045-T1
Unique NameCBS51388_004045-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An06:277164..279070-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004045-T1 ID=CBS51388_004045-T1|Name=CBS51388_004045-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1907bp|location=Sequence derived from alignment at An06:277164..279070- (Aspergillus niger CBS 513.88)
ATGGTCCGAGTGCCACGCGGTTGTCGGGCTTGCGCTGACGCCCATACTCA
GGTGCGTGTGTGATACGGATAATCGAATCACTGATGGTTCCGTGTTGGTC
GTTGGCTTCCTTCATTGTTTGCTGTCCTCCCCCAAGCATCGGGCCGCCCG
TCCTGGCGTCTACTAGTCGCCATTCCTCTCCTTGTGCTTGACCCCTGAAC
CCTGTGTTGCACAGATGTTGGCTGTCGTTTCTTTGTCTGTTGCTGCATGC
TTTGCCCCCTAAACCTGCCAGATGTGCCAGATGTCAATTGCCGACATTCC
TTTCTGGACTACATGGTATCCACCAGGGTCTTGCTGCTGCTGCATTATTT
AATTCTCCGGGTGTCCGCCTCCTTAATGAATGAGGGCCAAAATGTGTGTC
TGGTTTGAGAAGGTCAGGTTCTAACCGTCAGTAATCGGCTCTCTTCTAGT
GCGACGGCAAATCCCCTTGTAATCACTGCAAAACCCGCAACGTGCCTTGT
CTAAGCCAGGCCCGAACCTTCAAGTTCCGCAACGAAGTACCTGCTCTCCA
ACAACGTTACCGCACTTCCATCTCACCGACCACCTCCACTACTTCTTCTA
CTTCCACATCCACTGCGTCGTCGCAACTTGTCCCCCGCGCACCCCGCGAG
AGGGACCCGCCTTCTCCAGGTTCGGCCCGCGGGCGCGACGTGCGATTCGC
CCCGCTGCCGCTGTCAATGGACGAATCCGTCTCGCCCTCTCTGACCGTCA
CTGCGGTCTCCGCGCAACAAACCCAAATCTTCACCAATTACGTCCTCACT
GCCTTCCCTTGCTTCTTCAAATGCACCGAAACTCGCGTCCCCGTCAATTG
GGTCGAATATGTCGACCGTCGCCGTGGCGCCATGAACTCCTGCTTCGACT
GGGCCATTCGTGCCTGCACCCTGTCTTATACCGCCTCCCTCTACGATATC
CCTGAATTCAATGACGTCGCGCGCTCCTTCTACACCCGCTCTCTCGCCGG
TCTCGCCGGCCTTCTCGCCGACGAGTCGACCGCCAAATCCGACGAAGCTC
TCTCCACCGCAATTGTCCTCGCCGTGTTTGAGAAACACCACTGTACCGGC
CCAGAGGCGTGGATCCACCACGCCCACGGTATCCGCGCCTTGCTCAAACT
TCGTGGCCCCAGGGCCCATCTCTATGGTTTCGGTCGTGCCATGTATATTG
TCTACCGGCCGATGCTTGTCTCCGCTGCCCTCATTGAGGGCGAAGCCTGC
TTTCTCGAGGAACCTGAATGGCAAACCCTCAACGAGCAGATCTCTGACGA
CAACGCCAAGCTGCCCGATTCGTCATTATATACGGACGTAGTGGACCGGG
GCCTGCGCGAGATTATAAAAATCCCCGGTTACGTCAAACGCGTCCGCGAG
CTACTCTCTTTACCCCTCACCAAACGGGCCAAGCTCGAACCCCCCTTGCT
GCAAAGCGTGCAAGCTACCCGCGCTGCCCTGCGCGGTATCCACACCGAGT
TCGGTGTGGCCATATCCATGCTTCGTGCCGGCCACAGTAAGCCGCGCGGG
TTCATCGGACCCCTTCCCCAATTCTTCTTCGAGGGATATTCGGCGCATGT
CACGCGAGGCGTGCACGCCGGACTTACGATCCTGAATTATCTCGTCATCA
TGCTGGACCCGAGCCAGCGTGAGACACTGCAGAAAGAAGCTCGTCTGTTA
TCCAATCCGCCATCCCCGGAGAGTGTGGTCAGTCCGGCATCGGAGTACAG
CTCCCCGAAGACTCCGTCAAGCTCGCCGGGGCATCCCCAGCTCGTTGTGG
AGTCACTGATCACCCCGGATTACAAGCAGGGTCCGACAACGGACTGGATG
GATCAGTTGACGTCGTCAATGGGGATGGACGGGGTGCGGGTGCGTATTGT
TGATTGA
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Coding sequence (CDS) from alignment at An06:277164..279070-

>CBS51388_004045-T1 ID=CBS51388_004045-T1|Name=CBS51388_004045-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3018bp|location=Sequence derived from alignment at An06:277164..279070- (Aspergillus niger CBS 513.88)
TGCGACGGCAAATCCCCTTGTAATCACTGCAAAACCCGCAACGTGCCTTG
TCTAAGCCAGGCCCGAACCTTCAAGTTCCGCAACGAAGTACCTGCTCTCC
AACAACGTTACCGCACTTCCATCTCACCGACCACCTCCACTACTTCTTCT
ACTTCCACATCCACTGCGTCGTCGCAACTTGTCCCCCGCGCACCCCGCGA
GAGGGACCCGCCTTCTCCAGGTTCGGCCCGCGGGCGCGACGTGCGATTCG
CCCCGCTGCCGCTGTCAATGGACGAATCCGTCTCGCCCTCTCTGACCGTC
ACTGCGGTCTCCGCGCAACAAACCCAAATCTTCACCAATTACGTCCTCAC
TGCCTTCCCTTGCTTCTTCAAATGCACCGAAACTCGCGTCCCCGTCAATT
GGGTCGAATATGTCGACCGTCGCCGTGGCGCCATGAACTCCTGCTTCGAC
TGGGCCATTCGTGCCTGCACCCTGTCTTATACCGCCTCCCTCTACGATAT
CCCTGAATTCAATGACGTCGCGCGCTCCTTCTACACCCGCTCTCTCGCCG
GTCTCGCCGGCCTTCTCGCCGACGAGTCGACCGCCAAATCCGACGAAGCT
CTCTCCACCGCAATTGTCCTCGCCGTGTTTGAGAAACACCACTGTACCGG
CCCAGAGGCGTGGATCCACCACGCCCACGGTATCCGCGCCTTGCTCAAAC
TTCGTGGCCCCAGGGCCCATCTCTATGGTTTCGGTCGTGCCATGTATATT
GTCTACCGGCCGATGCTTGTCTCCGCTGCCCTCATTGAGGGCGAAGCCTG
CTTTCTCGAGGAACCTGAATGGCAAACCCTCAACGAGCAGATCTCTGACG
ACAACGCCAAGCTGCCCGATTCGTCATTATATACGGACGTAGTGGACCGG
GGCCTGCGCGAGATTATAAAAATCCCCGGTTACGTCAAACGCGTCCGCGA
GCTACTCTCTTTACCCCTCACCAAACGGGCCAAGCTCGAACCCCCCTTGC
TGCAAAGCGTGCAAGCTACCCGCGCTGCCCTGCGCGGTATCCACACCGAG
TTCGGTGTGGCCATATCCATGCTTCGTGCCGGCCACAGTAAGCCGCGCGG
GTTCATCGGACCCCTTCCCCAATTCTTCTTCGAGGGATATTCGGCGCATG
TCACGCGAGGCGTGCACGCCGGACTTACGATCCTGAATTATCTCGTCATC
ATGCTGGACCCGAGCCAGCGTGAGACACTGCAGAAAGAAGCTCGTCTGTT
ATCCAATCCGCCATCCCCGGAGAGTGTGGTCAGTCCGGCATCGGAGTACA
GCTCCCCGAAGACTCCGTCAAGCTCGCCGGGGCATCCCCAGCTCGTTGTG
GAGTCACTGATCACCCCGGATTACAAGCAGGGTCCGACAACGGACTGGAT
GGATCAGTTGACGTCGTCAATGGGGATGGACGGGGTGCGGGTGCGTATTG
TTGATTGAATGGTCCGAGTGCCACGCGGTTGTCGGGCTTGCGCTGACGCC
CATACTCAGTGCGACGGCAAATCCCCTTGTAATCACTGCAAAACCCGCAA
CGTGCCTTGTCTAAGCCAGGCCCGAACCTTCAAGTTCCGCAACGAAGTAC
CTGCTCTCCAACAACGTTACCGCACTTCCATCTCACCGACCACCTCCACT
ACTTCTTCTACTTCCACATCCACTGCGTCGTCGCAACTTGTCCCCCGCGC
ACCCCGCGAGAGGGACCCGCCTTCTCCAGGTTCGGCCCGCGGGCGCGACG
TGCGATTCGCCCCGCTGCCGCTGTCAATGGACGAATCCGTCTCGCCCTCT
CTGACCGTCACTGCGGTCTCCGCGCAACAAACCCAAATCTTCACCAATTA
CGTCCTCACTGCCTTCCCTTGCTTCTTCAAATGCACCGAAACTCGCGTCC
CCGTCAATTGGGTCGAATATGTCGACCGTCGCCGTGGCGCCATGAACTCC
TGCTTCGACTGGGCCATTCGTGCCTGCACCCTGTCTTATACCGCCTCCCT
CTACGATATCCCTGAATTCAATGACGTCGCGCGCTCCTTCTACACCCGCT
CTCTCGCCGGTCTCGCCGGCCTTCTCGCCGACGAGTCGACCGCCAAATCC
GACGAAGCTCTCTCCACCGCAATTGTCCTCGCCGTGTTTGAGAAACACCA
CTGTACCGGCCCAGAGGCGTGGATCCACCACGCCCACGGTATCCGCGCCT
TGCTCAAACTTCGTGGCCCCAGGGCCCATCTCTATGGTTTCGGTCGTGCC
ATGTATATTGTCTACCGGCCGATGCTTGTCTCCGCTGCCCTCATTGAGGG
CGAAGCCTGCTTTCTCGAGGAACCTGAATGGCAAACCCTCAACGAGCAGA
TCTCTGACGACAACGCCAAGCTGCCCGATTCGTCATTATATACGGACGTA
GTGGACCGGGGCCTGCGCGAGATTATAAAAATCCCCGGTTACGTCAAACG
CGTCCGCGAGCTACTCTCTTTACCCCTCACCAAACGGGCCAAGCTCGAAC
CCCCCTTGCTGCAAAGCGTGCAAGCTACCCGCGCTGCCCTGCGCGGTATC
CACACCGAGTTCGGTGTGGCCATATCCATGCTTCGTGCCGGCCACAGTAA
GCCGCGCGGGTTCATCGGACCCCTTCCCCAATTCTTCTTCGAGGGATATT
CGGCGCATGTCACGCGAGGCGTGCACGCCGGACTTACGATCCTGAATTAT
CTCGTCATCATGCTGGACCCGAGCCAGCGTGAGACACTGCAGAAAGAAGC
TCGTCTGTTATCCAATCCGCCATCCCCGGAGAGTGTGGTCAGTCCGGCAT
CGGAGTACAGCTCCCCGAAGACTCCGTCAAGCTCGCCGGGGCATCCCCAG
CTCGTTGTGGAGTCACTGATCACCCCGGATTACAAGCAGGGTCCGACAAC
GGACTGGATGGATCAGTTGACGTCGTCAATGGGGATGGACGGGGTGCGGG
TGCGTATTGTTGATTGAATGGTCCGAGTGCCACGCGGTTGTCGGGCTTGC
GCTGACGCCCATACTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004045CBS51388_004045Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004045-T1CBS51388_004045-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004045-T1.cdsCBS51388_004045-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004045-T1.exon2CBS51388_004045-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004045-T1.exon1CBS51388_004045-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An06supercontigAn06:277164..279070 -
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