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CBS51388_004054-T1, CBS51388_004054-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004054-T1
Unique NameCBS51388_004054-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An06:293773..295592+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004054-T1 ID=CBS51388_004054-T1|Name=CBS51388_004054-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1820bp|location=Sequence derived from alignment at An06:293773..295592+ (Aspergillus niger CBS 513.88)
ATGGCAGATGATGAAGTCATGCGAAATGGGGTTGATGGCAGTCCCAACAA
TGAGGTACAAAATGCCGATCCTAAAGGTACTCTGGATGCCAGTGACTTAG
GAAAAGGTTCACCCATGGATCCAGAGTCAGACGAAGATGTACCAGTTGAG
GCAGAGGAGCTTCAGGACGCTCTCACACGGGCGCCGCCGGTCAACAGCAG
CTACCTACCCCTCCCTTGGAAGGGACGACTAGGTTATGTAAGTTTGCATC
ATCATTCTTTCAAACCAATCCTTATGCTGTATAGGCATGTCTGAATACGT
ATCTACGATATGCGACCCCGCCCGTTTTCTGCTCCCGGACTTGCCGCATT
GCCTCCATCCTGGAAAACAGACATCCACTCTCGGATCCTTCGCAGCCCCC
TCATCCGACCAAAAACCGTCCTGATCGTGATCAGCCCGCTGATGTCGCGC
GCGGTCAGGCGTATGTTGAGGCTATAGGCCTCACCAATGCTCGCGATCTC
GTCAAAATGCTGCGCTGGAATGACCGCTACGGAATCAAGTTCATGCGATT
GAGCAGCGAGATGTTTCCATTTGCGAGCCACAAGGAGTACGGCTACAAGT
TGGCTCCCTTTGCCTCTGAAGTACTGGCAGAAGCTGGTCGTGTCGTTGCC
GAGCTCGGTCATCGCGTGAGCGTTCATCCCGGTCAATTCACGCAACTGGG
CTCTCCTAAGGACGAAGTAGTGGAAAGCTCCATTCGAGATCTGGAATACC
ACTCGGAAATGCTCCAGTTGCTCCAGCTGCCACCTCAACAGGATAGGGAT
GCTGTTATGATTCTGCACATGGGCGGCGTCTTTGGTGACAAAGAAGCCAC
TCTTGACCGGTTTAGAGAGAATTATCGAGGCCTATCGCAGGACATCAAAA
ATCGGCTTGTCTTGGAGAACGACGATGTCAGCTGGTCGGTTCACGACCTC
CTGCCCATTTGTGAAGAACTGAACATACCCCTGGTACTCGACTTCCACCA
CCACAATATCATCTTTGATTCGAGCCAGCTCCGCGAGGGCACACTGGACA
TCATGTCCTTGTTTGATCGGATCAAGGCGACATGGACCCGGAAGGGCATC
ACGCAGAAGATGCACTATTCTGAGCCAGAACCATCTGCCATCACAAACCG
CCAACGTCGGAAGCATAGCCCCCGGGTCTCCACTCTTCCACCGTGCGATC
CCACCATGGATCTGATGATCGAGGCCAAGGACAAGGAGCAAGCTGTTTTC
GAATTGATGCGGACATTTAAGCTGCCGGGTCACGAACTTGTCAACGATAT
CATTCCTCACGTGCGTAATGACGAAAACAGGCCACATAAGCCGCCGAGGA
AGACCAAGAAGAACGGGGGTTTTGTGGATCTGGAGGGACTGGTCCCACCT
CCTCAGACTGTCCCTGAAGAAGAAGTGGGCATGGGTGGTCCGGAGGGACG
GGTCTACTGGCCTCCTGGCATGGAGGAATGGCTTCGACCGAAGAAGATTG
TTCGCACCAAAGCCATCCAGAGCCCTCGCCGCACTCCTTCCACGAAGAAA
GTAGCGGTCGAAAATGGCGATTCTGTACCACAGGAAGAACCGGATGGAAG
CGCGCTAGCTACGCCGGTGTCAAAGAAGAAGACACCTAATGTAAAGAAAC
CGGTCTCCAGGAAGCGGAAAGCTTCTCCGGCGACTACACCGTCAGCTTCA
GATGAAGAAGCACCCGAAATCCCAGAGAGGCCGACTCTTAAGCGATCCCA
GAGCAGTGGTGTTCGTCGAAGCCGACGAGCAAAGAAGGTGGACTACGCCG
AAGATGAAGACTCGGTCTGA
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Coding sequence (CDS) from alignment at An06:293773..295592+

>CBS51388_004054-T1 ID=CBS51388_004054-T1|Name=CBS51388_004054-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3546bp|location=Sequence derived from alignment at An06:293773..295592+ (Aspergillus niger CBS 513.88)
ATGGCAGATGATGAAGTCATGCGAAATGGGGTTGATGGCAGTCCCAACAA
TGAGGTACAAAATGCCGATCCTAAAGGTACTCTGGATGCCAGTGACTTAG
GAAAAGGTTCACCCATGGATCCAGAGTCAGACGAAGATGTACCAGTTGAG
GCAGAGGAGCTTCAGGACGCTCTCACACGGGCGCCGCCGGTCAACAGCAG
CTACCTACCCCTCCCTTGGAAGGGACGACTAGGTTATGCATGTCTGAATA
CGTATCTACGATATGCGACCCCGCCCGTTTTCTGCTCCCGGACTTGCCGC
ATTGCCTCCATCCTGGAAAACAGACATCCACTCTCGGATCCTTCGCAGCC
CCCTCATCCGACCAAAAACCGTCCTGATCGTGATCAGCCCGCTGATGTCG
CGCGCGGTCAGGCGTATGTTGAGGCTATAGGCCTCACCAATGCTCGCGAT
CTCGTCAAAATGCTGCGCTGGAATGACCGCTACGGAATCAAGTTCATGCG
ATTGAGCAGCGAGATGTTTCCATTTGCGAGCCACAAGGAGTACGGCTACA
AGTTGGCTCCCTTTGCCTCTGAAGTACTGGCAGAAGCTGGTCGTGTCGTT
GCCGAGCTCGGTCATCGCGTGAGCGTTCATCCCGGTCAATTCACGCAACT
GGGCTCTCCTAAGGACGAAGTAGTGGAAAGCTCCATTCGAGATCTGGAAT
ACCACTCGGAAATGCTCCAGTTGCTCCAGCTGCCACCTCAACAGGATAGG
GATGCTGTTATGATTCTGCACATGGGCGGCGTCTTTGGTGACAAAGAAGC
CACTCTTGACCGGTTTAGAGAGAATTATCGAGGCCTATCGCAGGACATCA
AAAATCGGCTTGTCTTGGAGAACGACGATGTCAGCTGGTCGGTTCACGAC
CTCCTGCCCATTTGTGAAGAACTGAACATACCCCTGGTACTCGACTTCCA
CCACCACAATATCATCTTTGATTCGAGCCAGCTCCGCGAGGGCACACTGG
ACATCATGTCCTTGTTTGATCGGATCAAGGCGACATGGACCCGGAAGGGC
ATCACGCAGAAGATGCACTATTCTGAGCCAGAACCATCTGCCATCACAAA
CCGCCAACGTCGGAAGCATAGCCCCCGGGTCTCCACTCTTCCACCGTGCG
ATCCCACCATGGATCTGATGATCGAGGCCAAGGACAAGGAGCAAGCTGTT
TTCGAATTGATGCGGACATTTAAGCTGCCGGGTCACGAACTTGTCAACGA
TATCATTCCTCACGTGCGTAATGACGAAAACAGGCCACATAAGCCGCCGA
GGAAGACCAAGAAGAACGGGGGTTTTGTGGATCTGGAGGGACTGGTCCCA
CCTCCTCAGACTGTCCCTGAAGAAGAAGTGGGCATGGGTGGTCCGGAGGG
ACGGGTCTACTGGCCTCCTGGCATGGAGGAATGGCTTCGACCGAAGAAGA
TTGTTCGCACCAAAGCCATCCAGAGCCCTCGCCGCACTCCTTCCACGAAG
AAAGTAGCGGTCGAAAATGGCGATTCTGTACCACAGGAAGAACCGGATGG
AAGCGCGCTAGCTACGCCGGTGTCAAAGAAGAAGACACCTAATGTAAAGA
AACCGGTCTCCAGGAAGCGGAAAGCTTCTCCGGCGACTACACCGTCAGCT
TCAGATGAAGAAGCACCCGAAATCCCAGAGAGGCCGACTCTTAAGCGATC
CCAGAGCAGTGGTGTTCGTCGAAGCCGACGAGCAAAGAAGGTGGACTACG
CCGAAGATGAAGACTCGGTCTGAATGGCAGATGATGAAGTCATGCGAAAT
GGGGTTGATGGCAGTCCCAACAATGAGGTACAAAATGCCGATCCTAAAGG
TACTCTGGATGCCAGTGACTTAGGAAAAGGTTCACCCATGGATCCAGAGT
CAGACGAAGATGTACCAGTTGAGGCAGAGGAGCTTCAGGACGCTCTCACA
CGGGCGCCGCCGGTCAACAGCAGCTACCTACCCCTCCCTTGGAAGGGACG
ACTAGGTTATGCATGTCTGAATACGTATCTACGATATGCGACCCCGCCCG
TTTTCTGCTCCCGGACTTGCCGCATTGCCTCCATCCTGGAAAACAGACAT
CCACTCTCGGATCCTTCGCAGCCCCCTCATCCGACCAAAAACCGTCCTGA
TCGTGATCAGCCCGCTGATGTCGCGCGCGGTCAGGCGTATGTTGAGGCTA
TAGGCCTCACCAATGCTCGCGATCTCGTCAAAATGCTGCGCTGGAATGAC
CGCTACGGAATCAAGTTCATGCGATTGAGCAGCGAGATGTTTCCATTTGC
GAGCCACAAGGAGTACGGCTACAAGTTGGCTCCCTTTGCCTCTGAAGTAC
TGGCAGAAGCTGGTCGTGTCGTTGCCGAGCTCGGTCATCGCGTGAGCGTT
CATCCCGGTCAATTCACGCAACTGGGCTCTCCTAAGGACGAAGTAGTGGA
AAGCTCCATTCGAGATCTGGAATACCACTCGGAAATGCTCCAGTTGCTCC
AGCTGCCACCTCAACAGGATAGGGATGCTGTTATGATTCTGCACATGGGC
GGCGTCTTTGGTGACAAAGAAGCCACTCTTGACCGGTTTAGAGAGAATTA
TCGAGGCCTATCGCAGGACATCAAAAATCGGCTTGTCTTGGAGAACGACG
ATGTCAGCTGGTCGGTTCACGACCTCCTGCCCATTTGTGAAGAACTGAAC
ATACCCCTGGTACTCGACTTCCACCACCACAATATCATCTTTGATTCGAG
CCAGCTCCGCGAGGGCACACTGGACATCATGTCCTTGTTTGATCGGATCA
AGGCGACATGGACCCGGAAGGGCATCACGCAGAAGATGCACTATTCTGAG
CCAGAACCATCTGCCATCACAAACCGCCAACGTCGGAAGCATAGCCCCCG
GGTCTCCACTCTTCCACCGTGCGATCCCACCATGGATCTGATGATCGAGG
CCAAGGACAAGGAGCAAGCTGTTTTCGAATTGATGCGGACATTTAAGCTG
CCGGGTCACGAACTTGTCAACGATATCATTCCTCACGTGCGTAATGACGA
AAACAGGCCACATAAGCCGCCGAGGAAGACCAAGAAGAACGGGGGTTTTG
TGGATCTGGAGGGACTGGTCCCACCTCCTCAGACTGTCCCTGAAGAAGAA
GTGGGCATGGGTGGTCCGGAGGGACGGGTCTACTGGCCTCCTGGCATGGA
GGAATGGCTTCGACCGAAGAAGATTGTTCGCACCAAAGCCATCCAGAGCC
CTCGCCGCACTCCTTCCACGAAGAAAGTAGCGGTCGAAAATGGCGATTCT
GTACCACAGGAAGAACCGGATGGAAGCGCGCTAGCTACGCCGGTGTCAAA
GAAGAAGACACCTAATGTAAAGAAACCGGTCTCCAGGAAGCGGAAAGCTT
CTCCGGCGACTACACCGTCAGCTTCAGATGAAGAAGCACCCGAAATCCCA
GAGAGGCCGACTCTTAAGCGATCCCAGAGCAGTGGTGTTCGTCGAAGCCG
ACGAGCAAAGAAGGTGGACTACGCCGAAGATGAAGACTCGGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0009411response to UV
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS18CBS51388_004054Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004054-T1.exon1CBS51388_004054-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004054-T1.exon2CBS51388_004054-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004054-T1.cdsCBS51388_004054-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004054-T1CBS51388_004054-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_6.2
DBxrefInterPro:IPR036237
DBxrefInterPro:IPR004601
DBxrefPFAM:PF03851
ProductUV-damage endonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An06supercontigAn06:293773..295592 +
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