|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:405307..407507+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004080-T1 ID=CBS51388_004080-T1|Name=CBS51388_004080-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2201bp|location=Sequence derived from alignment at An06:405307..407507+ (Aspergillus niger CBS 513.88)
ATGGCTCGACTCAACCCCTCTAGCCCCACGAAGCCAGCCAAGCTCCAAGA
GCGCCGAACACCACCCGCGCAGAGGAATCTCAACCGCACAGCGACCATCA
AGCGGGACTCCAGAGACAACAAATACACCGCGACAGCCAAGGCCAAGACA
GTAGAACAATGGGCAGCCGCCGACGAGACATGGACAAAGAGCCGATACTC
CGCGACCACGCCAGCGATCGAAGAACCGTCGCAAAGGAAGAATAATAACA
GACTACAAAGATCGGGGACTGTTTCTAGTGGGGTATTCGATATCTTTTCG
GACAATGGGGACGAGCAGAGTGAAACGGAGGAAAGTAGTTTCTCGTCGAC
TCGGTCTTTGATGTCGAATGAGGGACGCACTACGGATCCTTTGAAGCTCT
CGCAGATCAATTCTTTGTTGCTTCCATTGTCGCAGCAGTCGCGGAATAAT
AGGCCGCCGCGTAAGTCGGTAGGGTATAATTACGACAAGGAAAATGACCC
TATCGATGATGAGGCAGAGGAGGCAGATGAGAGTTCGGGTCTCTCGAGAA
ACTCGTCTACTGCTTCGAACCGAGCGCCTACGCGTAATACTAACAGAGAA
GTGCAGCCGCGGGGCAGGTCTCGGACGAGGTATATGGGATATCGTCGGGA
GGAGACAGAGTCAGAGGCTGAAGAAAGCGAAGAGAATAATGGCTTTGACT
CAATGGATGATTTCATTGTCAGCGACAACGAAGAAATCAGCTATCATGAG
ACGTCCGACGATGAAAGCATCGAAGAAGAACAAGAAGAGAAACAGCCAAC
TCCTTCGCCGCCCAGGACTAGAAAGAGACTGCTTAGAGGGAGACGACCCC
GTCCAGAAATAGAGCCAGAGACAACACCTCAGGATTCTCCGCGTGAAAGC
CTCGATTTAGAGCCTTCAGTGCCTGCTACGATGACAATGGAGGTTCCTAA
GCTAGAGGCAAAGCCCAAGAGATTGTTTCAAAGCGAGCTGGAAATATCCG
AGAAGCTGAACAAGCTGAAGTTGGACAATAAAGACATAGAGCCCCAACTG
GACGAGAAGAGCACTTATGAGTGAGTTTTAATGGAGACCCCCAGCCACCC
ATATATGTACTAACACCATGTAGCAGTATCGAAGAAGTAGACGCCCCCAC
CAAGAAGCTCCCATCAAGGGACAGTGTTCAACTGGAGACGCCCCCATCCA
GTCCAACAAAGGGACGCAGTCTACGATCTCCATCCAAGCTGAAGGCCCAC
ATACCACCAACACCACATCGAGAAAGCGTCGACGCATTCTGGAGCCAGGA
AAACACTAACAACTGGATCGACCAGCACTCTCCGTGCAAGATCGACGATC
TACTGCGCGAATTTGACGACTCCGACTCGGATGATGAGTTCAGCGACAGG
GAGATTATGCCCAAGACCGCAACACCGAAGACGACGACCAAGTCCTCGAC
AAGAACACCCAGCAAGACAGCAATGAAAAAGGCCGAAGCGGAACAGAGAA
AGCTCGAGCGGGAGCGCGCAAAGGCATTCATGGAGAACAGACAAGCCATG
GCCGAGCAATTCTTCAAAGTCCTCGACGACACCGTAACCGACGGGCGACT
CTCAAGAATGACCGCCTCGACAGGAGGCGTGATCATCGAATGGAAAAAGC
GACTCCAAACGACCGCCGGCAGAGCATCCTGGAAATGTGTTACCCCGTCA
CCGAAGAAGGGAGGAGGGCCGGCCATGCCACCGCAGCATTATGCCACCAT
CGAATTAGCAGCAAAGGTAGTCGACTGCGAAGAACGCATTATCAAGACGG
TCGCTCACGAGTTCTGTCATCTGGCGAACTACATGATCTCAGGCGTGCAT
GATAACCCCCATGGGACAAGCTTTAAGGCATGGGGTCGCAAGTGCAAGGA
AGCAATGAAGAACCATCCTGTCTATGGTGGGAAAGTCGAGGTCTCGATCA
AGCACGACTACGCTATCGACTATAAGTACGTGTGGCGCTGCGTGCACTGC
AACCTAGACTATGGACGTCACTCGAAGAGTATTGATCCCAAGAGACATCG
ATGCCGATGCCAGGGCGTCTTGCAGCAGATCCAACCCAAGGTGAGGAATG
TGTCGCCATTGAAGAAGTCGGTGAACGCGCCAACACCGAGTGTTAGGGGT
TTGTTGAATGAGGTGGGCCGTGTGTTAAATGAGACGCAGAGGCAGACATA
A back to topCoding sequence (CDS) from alignment at An06:405307..407507+ >CBS51388_004080-T1 ID=CBS51388_004080-T1|Name=CBS51388_004080-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4296bp|location=Sequence derived from alignment at An06:405307..407507+ (Aspergillus niger CBS 513.88)
ATGGCTCGACTCAACCCCTCTAGCCCCACGAAGCCAGCCAAGCTCCAAGA
GCGCCGAACACCACCCGCGCAGAGGAATCTCAACCGCACAGCGACCATCA
AGCGGGACTCCAGAGACAACAAATACACCGCGACAGCCAAGGCCAAGACA
GTAGAACAATGGGCAGCCGCCGACGAGACATGGACAAAGAGCCGATACTC
CGCGACCACGCCAGCGATCGAAGAACCGTCGCAAAGGAAGAATAATAACA
GACTACAAAGATCGGGGACTGTTTCTAGTGGGGTATTCGATATCTTTTCG
GACAATGGGGACGAGCAGAGTGAAACGGAGGAAAGTAGTTTCTCGTCGAC
TCGGTCTTTGATGTCGAATGAGGGACGCACTACGGATCCTTTGAAGCTCT
CGCAGATCAATTCTTTGTTGCTTCCATTGTCGCAGCAGTCGCGGAATAAT
AGGCCGCCGCGTAAGTCGGTAGGGTATAATTACGACAAGGAAAATGACCC
TATCGATGATGAGGCAGAGGAGGCAGATGAGAGTTCGGGTCTCTCGAGAA
ACTCGTCTACTGCTTCGAACCGAGCGCCTACGCGTAATACTAACAGAGAA
GTGCAGCCGCGGGGCAGGTCTCGGACGAGGTATATGGGATATCGTCGGGA
GGAGACAGAGTCAGAGGCTGAAGAAAGCGAAGAGAATAATGGCTTTGACT
CAATGGATGATTTCATTGTCAGCGACAACGAAGAAATCAGCTATCATGAG
ACGTCCGACGATGAAAGCATCGAAGAAGAACAAGAAGAGAAACAGCCAAC
TCCTTCGCCGCCCAGGACTAGAAAGAGACTGCTTAGAGGGAGACGACCCC
GTCCAGAAATAGAGCCAGAGACAACACCTCAGGATTCTCCGCGTGAAAGC
CTCGATTTAGAGCCTTCAGTGCCTGCTACGATGACAATGGAGGTTCCTAA
GCTAGAGGCAAAGCCCAAGAGATTGTTTCAAAGCGAGCTGGAAATATCCG
AGAAGCTGAACAAGCTGAAGTTGGACAATAAAGACATAGAGCCCCAACTG
GACGAGAAGAGCACTTATGACAGTATCGAAGAAGTAGACGCCCCCACCAA
GAAGCTCCCATCAAGGGACAGTGTTCAACTGGAGACGCCCCCATCCAGTC
CAACAAAGGGACGCAGTCTACGATCTCCATCCAAGCTGAAGGCCCACATA
CCACCAACACCACATCGAGAAAGCGTCGACGCATTCTGGAGCCAGGAAAA
CACTAACAACTGGATCGACCAGCACTCTCCGTGCAAGATCGACGATCTAC
TGCGCGAATTTGACGACTCCGACTCGGATGATGAGTTCAGCGACAGGGAG
ATTATGCCCAAGACCGCAACACCGAAGACGACGACCAAGTCCTCGACAAG
AACACCCAGCAAGACAGCAATGAAAAAGGCCGAAGCGGAACAGAGAAAGC
TCGAGCGGGAGCGCGCAAAGGCATTCATGGAGAACAGACAAGCCATGGCC
GAGCAATTCTTCAAAGTCCTCGACGACACCGTAACCGACGGGCGACTCTC
AAGAATGACCGCCTCGACAGGAGGCGTGATCATCGAATGGAAAAAGCGAC
TCCAAACGACCGCCGGCAGAGCATCCTGGAAATGTGTTACCCCGTCACCG
AAGAAGGGAGGAGGGCCGGCCATGCCACCGCAGCATTATGCCACCATCGA
ATTAGCAGCAAAGGTAGTCGACTGCGAAGAACGCATTATCAAGACGGTCG
CTCACGAGTTCTGTCATCTGGCGAACTACATGATCTCAGGCGTGCATGAT
AACCCCCATGGGACAAGCTTTAAGGCATGGGGTCGCAAGTGCAAGGAAGC
AATGAAGAACCATCCTGTCTATGGTGGGAAAGTCGAGGTCTCGATCAAGC
ACGACTACGCTATCGACTATAAGTACGTGTGGCGCTGCGTGCACTGCAAC
CTAGACTATGGACGTCACTCGAAGAGTATTGATCCCAAGAGACATCGATG
CCGATGCCAGGGCGTCTTGCAGCAGATCCAACCCAAGGTGAGGAATGTGT
CGCCATTGAAGAAGTCGGTGAACGCGCCAACACCGAGTGTTAGGGGTTTG
TTGAATGAGGTGGGCCGTGTGTTAAATGAGACGCAGAGGCAGACATAAAT
GGCTCGACTCAACCCCTCTAGCCCCACGAAGCCAGCCAAGCTCCAAGAGC
GCCGAACACCACCCGCGCAGAGGAATCTCAACCGCACAGCGACCATCAAG
CGGGACTCCAGAGACAACAAATACACCGCGACAGCCAAGGCCAAGACAGT
AGAACAATGGGCAGCCGCCGACGAGACATGGACAAAGAGCCGATACTCCG
CGACCACGCCAGCGATCGAAGAACCGTCGCAAAGGAAGAATAATAACAGA
CTACAAAGATCGGGGACTGTTTCTAGTGGGGTATTCGATATCTTTTCGGA
CAATGGGGACGAGCAGAGTGAAACGGAGGAAAGTAGTTTCTCGTCGACTC
GGTCTTTGATGTCGAATGAGGGACGCACTACGGATCCTTTGAAGCTCTCG
CAGATCAATTCTTTGTTGCTTCCATTGTCGCAGCAGTCGCGGAATAATAG
GCCGCCGCGTAAGTCGGTAGGGTATAATTACGACAAGGAAAATGACCCTA
TCGATGATGAGGCAGAGGAGGCAGATGAGAGTTCGGGTCTCTCGAGAAAC
TCGTCTACTGCTTCGAACCGAGCGCCTACGCGTAATACTAACAGAGAAGT
GCAGCCGCGGGGCAGGTCTCGGACGAGGTATATGGGATATCGTCGGGAGG
AGACAGAGTCAGAGGCTGAAGAAAGCGAAGAGAATAATGGCTTTGACTCA
ATGGATGATTTCATTGTCAGCGACAACGAAGAAATCAGCTATCATGAGAC
GTCCGACGATGAAAGCATCGAAGAAGAACAAGAAGAGAAACAGCCAACTC
CTTCGCCGCCCAGGACTAGAAAGAGACTGCTTAGAGGGAGACGACCCCGT
CCAGAAATAGAGCCAGAGACAACACCTCAGGATTCTCCGCGTGAAAGCCT
CGATTTAGAGCCTTCAGTGCCTGCTACGATGACAATGGAGGTTCCTAAGC
TAGAGGCAAAGCCCAAGAGATTGTTTCAAAGCGAGCTGGAAATATCCGAG
AAGCTGAACAAGCTGAAGTTGGACAATAAAGACATAGAGCCCCAACTGGA
CGAGAAGAGCACTTATGACAGTATCGAAGAAGTAGACGCCCCCACCAAGA
AGCTCCCATCAAGGGACAGTGTTCAACTGGAGACGCCCCCATCCAGTCCA
ACAAAGGGACGCAGTCTACGATCTCCATCCAAGCTGAAGGCCCACATACC
ACCAACACCACATCGAGAAAGCGTCGACGCATTCTGGAGCCAGGAAAACA
CTAACAACTGGATCGACCAGCACTCTCCGTGCAAGATCGACGATCTACTG
CGCGAATTTGACGACTCCGACTCGGATGATGAGTTCAGCGACAGGGAGAT
TATGCCCAAGACCGCAACACCGAAGACGACGACCAAGTCCTCGACAAGAA
CACCCAGCAAGACAGCAATGAAAAAGGCCGAAGCGGAACAGAGAAAGCTC
GAGCGGGAGCGCGCAAAGGCATTCATGGAGAACAGACAAGCCATGGCCGA
GCAATTCTTCAAAGTCCTCGACGACACCGTAACCGACGGGCGACTCTCAA
GAATGACCGCCTCGACAGGAGGCGTGATCATCGAATGGAAAAAGCGACTC
CAAACGACCGCCGGCAGAGCATCCTGGAAATGTGTTACCCCGTCACCGAA
GAAGGGAGGAGGGCCGGCCATGCCACCGCAGCATTATGCCACCATCGAAT
TAGCAGCAAAGGTAGTCGACTGCGAAGAACGCATTATCAAGACGGTCGCT
CACGAGTTCTGTCATCTGGCGAACTACATGATCTCAGGCGTGCATGATAA
CCCCCATGGGACAAGCTTTAAGGCATGGGGTCGCAAGTGCAAGGAAGCAA
TGAAGAACCATCCTGTCTATGGTGGGAAAGTCGAGGTCTCGATCAAGCAC
GACTACGCTATCGACTATAAGTACGTGTGGCGCTGCGTGCACTGCAACCT
AGACTATGGACGTCACTCGAAGAGTATTGATCCCAAGAGACATCGATGCC
GATGCCAGGGCGTCTTGCAGCAGATCCAACCCAAGGTGAGGAATGTGTCG
CCATTGAAGAAGTCGGTGAACGCGCCAACACCGAGTGTTAGGGGTTTGTT
GAATGAGGTGGGCCGTGTGTTAAATGAGACGCAGAGGCAGACATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035240 |
| DBxref | InterPro:IPR006640 |
| DBxref | PFAM:PF17283 |
| DBxref | PFAM:PF10263 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:405307..407507 + |
|
