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CBS51388_004098-T1, CBS51388_004098-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004098-T1
Unique NameCBS51388_004098-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An06:455079..456257+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004098-T1 ID=CBS51388_004098-T1|Name=CBS51388_004098-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1179bp|location=Sequence derived from alignment at An06:455079..456257+ (Aspergillus niger CBS 513.88)
ATGGCGCCTCGAGTCAATATCCCTCCAGCGACCCGCATCTGTCTTATCAG
TCTTCTCACCCTCTCCTTGCTGTATAATATCGCCCGATGGCGGCAACTTG
ACACCACGCCCGGCGCACCTGCCATCACCCCGATCATACCCTATTTGACG
CTCGTTCCTTCACAATTTCTTTTCTATCCGTGGACCCTCCTTACCGCGAC
ACTTGTGGAGCAAAACATCTTCACCGTGCTTTTGAACGCGGCCACTCTCT
TTTATGGCGGGAAATACTTGGAGCGCGCATGGGGATCCCGGGAGTTTGCG
AAGTTCATCCTCGCCATCGCAGTCATCCCGAACGTAACGATCGTTCCGCT
TTATATTCTAGGAGCTGCCCTTAAAAGTGGCTCCAGCAGCGGGTACGCCT
TGTTTTCTCATGACGAATGCACAACATCTTGCGCTTTCCTTACTGACTCA
CCGACTTCAAGCCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATC
CTTCTTGGTCGCCTTCAAGCAGCTCGTCCCGGAGCATACGGTGACTATCT
TCAAAGGCTTGGTCAAAATGCGGGTGAAGCACTTTCCCGCGCTGTTTTTG
TTCCTGAACACCATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGAT
TCTTGCGTGGCTCGGCCTCTTGACAAGTTGGACCTACCTGCGCTTCTTCA
AACGTCAGCCTGACCTTACTGGCACATCGACCGACGGGCTAGGCATCAAG
GGTGATGCCAGCGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCT
TCAGCCGCCAATCGCGTTCCTGTCTGATCAAGTTTATGCTCTCCTGGTTG
CCATCAGGATCTGTACACCCTTCTCCGAGGAAGACATTGCCTCGGGCAAC
CAGCAGGTTCTGGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAA
CCATCGCAACGGACGGGCCATGGCGAAGCGGGAAGAAGCAGAGCGCAGAC
GTGCTCTAGCACTCAAGGCCCTCGACCAGAGACTTCAAGCAGCTGCTGCG
GGAAGAGTGCAGCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCA
TGCTCAGACTCCGACACCTACGGTTTCAGCGGGCCAGAGTATGTTGGGAG
AAACAAGCTACACCCCCGACCATGCGTGA
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Coding sequence (CDS) from alignment at An06:455079..456257+

>CBS51388_004098-T1 ID=CBS51388_004098-T1|Name=CBS51388_004098-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2220bp|location=Sequence derived from alignment at An06:455079..456257+ (Aspergillus niger CBS 513.88)
ATGGCGCCTCGAGTCAATATCCCTCCAGCGACCCGCATCTGTCTTATCAG
TCTTCTCACCCTCTCCTTGCTGTATAATATCGCCCGATGGCGGCAACTTG
ACACCACGCCCGGCGCACCTGCCATCACCCCGATCATACCCTATTTGACG
CTCGTTCCTTCACAATTTCTTTTCTATCCGTGGACCCTCCTTACCGCGAC
ACTTGTGGAGCAAAACATCTTCACCGTGCTTTTGAACGCGGCCACTCTCT
TTTATGGCGGGAAATACTTGGAGCGCGCATGGGGATCCCGGGAGTTTGCG
AAGTTCATCCTCGCCATCGCAGTCATCCCGAACGTAACGATCGTTCCGCT
TTATATTCTAGGAGCTGCCCTTAAAAGTGGCTCCAGCAGCGGCCTCACGC
AGATATGCGGCGGTATCTCGATTCAAGCATCCTTCTTGGTCGCCTTCAAG
CAGCTCGTCCCGGAGCATACGGTGACTATCTTCAAAGGCTTGGTCAAAAT
GCGGGTGAAGCACTTTCCCGCGCTGTTTTTGTTCCTGAACACCATCAGCG
GAATTGTCTTCGGCACGCATGTCGCAGCGATTCTTGCGTGGCTCGGCCTC
TTGACAAGTTGGACCTACCTGCGCTTCTTCAAACGTCAGCCTGACCTTAC
TGGCACATCGACCGACGGGCTAGGCATCAAGGGTGATGCCAGCGAGACTT
TTGCATTCGCATGTCTCTTTCCGGATGTGCTTCAGCCGCCAATCGCGTTC
CTGTCTGATCAAGTTTATGCTCTCCTGGTTGCCATCAGGATCTGTACACC
CTTCTCCGAGGAAGACATTGCCTCGGGCAACCAGCAGGTTCTGGCACGGG
GCGAGGCAGGTCTTCCCAGTATTCTTTCCAACCATCGCAACGGACGGGCC
ATGGCGAAGCGGGAAGAAGCAGAGCGCAGACGTGCTCTAGCACTCAAGGC
CCTCGACCAGAGACTTCAAGCAGCTGCTGCGGGAAGAGTGCAGCCGGCGA
CGTCTGCAGCGAACCAGCAAGGATCCAGCCATGCTCAGACTCCGACACCT
ACGGTTTCAGCGGGCCAGAGTATGTTGGGAGAAACAAGCTACACCCCCGA
CCATGCGTGAATGGCGCCTCGAGTCAATATCCCTCCAGCGACCCGCATCT
GTCTTATCAGTCTTCTCACCCTCTCCTTGCTGTATAATATCGCCCGATGG
CGGCAACTTGACACCACGCCCGGCGCACCTGCCATCACCCCGATCATACC
CTATTTGACGCTCGTTCCTTCACAATTTCTTTTCTATCCGTGGACCCTCC
TTACCGCGACACTTGTGGAGCAAAACATCTTCACCGTGCTTTTGAACGCG
GCCACTCTCTTTTATGGCGGGAAATACTTGGAGCGCGCATGGGGATCCCG
GGAGTTTGCGAAGTTCATCCTCGCCATCGCAGTCATCCCGAACGTAACGA
TCGTTCCGCTTTATATTCTAGGAGCTGCCCTTAAAAGTGGCTCCAGCAGC
GGCCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATCCTTCTTGGT
CGCCTTCAAGCAGCTCGTCCCGGAGCATACGGTGACTATCTTCAAAGGCT
TGGTCAAAATGCGGGTGAAGCACTTTCCCGCGCTGTTTTTGTTCCTGAAC
ACCATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGATTCTTGCGTG
GCTCGGCCTCTTGACAAGTTGGACCTACCTGCGCTTCTTCAAACGTCAGC
CTGACCTTACTGGCACATCGACCGACGGGCTAGGCATCAAGGGTGATGCC
AGCGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCTTCAGCCGCC
AATCGCGTTCCTGTCTGATCAAGTTTATGCTCTCCTGGTTGCCATCAGGA
TCTGTACACCCTTCTCCGAGGAAGACATTGCCTCGGGCAACCAGCAGGTT
CTGGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAACCATCGCAA
CGGACGGGCCATGGCGAAGCGGGAAGAAGCAGAGCGCAGACGTGCTCTAG
CACTCAAGGCCCTCGACCAGAGACTTCAAGCAGCTGCTGCGGGAAGAGTG
CAGCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCATGCTCAGAC
TCCGACACCTACGGTTTCAGCGGGCCAGAGTATGTTGGGAGAAACAAGCT
ACACCCCCGACCATGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004098CBS51388_004098Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004098-T1.exon1CBS51388_004098-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004098-T1.exon2CBS51388_004098-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004098-T1.cdsCBS51388_004098-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004098-T1CBS51388_004098-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013861
DBxrefPFAM:PF01694
DBxrefPFAM:PF08551
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An06supercontigAn06:455079..456257 +
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