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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:504322..505137+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004117-T1 ID=CBS51388_004117-T1|Name=CBS51388_004117-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=816bp|location=Sequence derived from alignment at An06:504322..505137+ (Aspergillus niger CBS 513.88)
ATGCAGCCTGTAGCCTTCCATCCTTCCCGGCACTATATAGGGTCGGTCTT
GATAGATCGAAGTCACAGAAAGTTTACCAAGACCTCAGACAAGCAAATAC
AGACTTCCATTCCTTCCGGACCTCCAACACGGTTCCTCCGAGCAAAAACC
GCAAAGACCATGCAACCCATCACTCTCTACTCGCACCCTATCGGGCCTAA
TCCGTGGAAGGTCGCCATCATCCTCTCCGCTCTGCACATCCCCTACGAAA
TGGTCATGATTGACTTCACCGAGGTGAAAAAGGAGCCCTACGTGAGCCTC
TGTCCCAATGGACGGCTGCCAACCATCGTGGATCCCAACAAGAACATCAC
CTTGTGGGAATCAGGCGCCATTGTGAACTACCTGATTGAGACCTACGATC
AGAGCCACCAGCTGAGCTATGACACCTTTCCCGAGCGCCACCAGCTGCAA
CAATGGCTGCATTTCCAAGTGTCCGGGCAAGGGCCGTACTACGGACAGTT
AGGCTGGTTCCGGCGGCAGCCCGAGCAGGTGCCCCAGGCCATCGAACGCT
ACACAGCGGAGATCCGGCGCGTCATGAGTGTGCTAGACCAGGTGTTGACG
GACCGCGAATGGCTTGTGGGCGACAAGTGCACGTATGCAGACCTCTCCTT
TGTCCCCTGGCAGGATCTGGTGCCGTTGGTGGTCGGGGACCAGCGCGTGG
TACAGGAATTGACCGAGCAATTTCCCCATGTGGAGGCGTGGATGCAGAGA
ATGAGGGCGAGACCAGAGGTACAGAAAGTGCTGAAGGAGAAGAGCGAGGC
GATGGCGTTGAATTAG back to topCoding sequence (CDS) from alignment at An06:504322..505137+ >CBS51388_004117-T1 ID=CBS51388_004117-T1|Name=CBS51388_004117-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=816bp|location=Sequence derived from alignment at An06:504322..505137+ (Aspergillus niger CBS 513.88)
ATGCAGCCTGTAGCCTTCCATCCTTCCCGGCACTATATAGGGTCGGTCTT
GATAGATCGAAGTCACAGAAAGTTTACCAAGACCTCAGACAAGCAAATAC
AGACTTCCATTCCTTCCGGACCTCCAACACGGTTCCTCCGAGCAAAAACC
GCAAAGACCATGCAACCCATCACTCTCTACTCGCACCCTATCGGGCCTAA
TCCGTGGAAGGTCGCCATCATCCTCTCCGCTCTGCACATCCCCTACGAAA
TGGTCATGATTGACTTCACCGAGGTGAAAAAGGAGCCCTACGTGAGCCTC
TGTCCCAATGGACGGCTGCCAACCATCGTGGATCCCAACAAGAACATCAC
CTTGTGGGAATCAGGCGCCATTGTGAACTACCTGATTGAGACCTACGATC
AGAGCCACCAGCTGAGCTATGACACCTTTCCCGAGCGCCACCAGCTGCAA
CAATGGCTGCATTTCCAAGTGTCCGGGCAAGGGCCGTACTACGGACAGTT
AGGCTGGTTCCGGCGGCAGCCCGAGCAGGTGCCCCAGGCCATCGAACGCT
ACACAGCGGAGATCCGGCGCGTCATGAGTGTGCTAGACCAGGTGTTGACG
GACCGCGAATGGCTTGTGGGCGACAAGTGCACGTATGCAGACCTCTCCTT
TGTCCCCTGGCAGGATCTGGTGCCGTTGGTGGTCGGGGACCAGCGCGTGG
TACAGGAATTGACCGAGCAATTTCCCCATGTGGAGGCGTGGATGCAGAGA
ATGAGGGCGAGACCAGAGGTACAGAAAGTGCTGAAGGAGAAGAGCGAGGC
GATGGCGTTGAATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR004045 |
| DBxref | InterPro:IPR004046 |
| DBxref | InterPro:IPR036249 |
| DBxref | PFAM:PF13417 |
| DBxref | PFAM:PF13409 |
| DBxref | PFAM:PF02798 |
| DBxref | PFAM:PF14497 |
| DBxref | PFAM:PF13410 |
| DBxref | PFAM:PF00043 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:504322..505137 + |
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