You are here

Home

CBS51388_004124-T1, CBS51388_004124-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004124-T1
Unique NameCBS51388_004124-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An06:522948..524030+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004124-T1 ID=CBS51388_004124-T1|Name=CBS51388_004124-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1083bp|location=Sequence derived from alignment at An06:522948..524030+ (Aspergillus niger CBS 513.88)
ATGTCGAACCAAGCAGGCTGGGTCAAAACCCCATATGGGCGAGTTCAGGT
CGAGCCTGTAGAGCAATGGGTTCCTGGCCGTGGGGAACTCTTGGTTCGGG
TTGAAGCAGCTAGCTTTAACCCCATTGACGCCAAAATCCAGAGGTACCGT
GCCCGAATATCTGCCAGCTGGCCGTCAAACTAAAATCTCAGGTTGGATCT
ATTCCAATCTCAATACCCCCTCATCCTCGGATTCACCTTTGCGGGAACGG
TAGTCTCTACAGGGCCCGAGATTAATTCCGTGCAACCTGGCGACCGGGTG
GTGGTGGCTCGCTGGGGCCAGCAAGCAGGCGAGGATCCCCGATTTGGGGC
CCTCCAGAGGTATGCACTGGCACTCGAGCAAAACACCCTGCGACTAGAGC
CCGAGACCACATTTGCCGATGCCGCCGGTCTGATCGCCAATCTGGCGACC
GTGGTCTCCGCCCTCACCATCTACATGGGCCTCTCTAAGCCGCCAGTCAC
CGGCACGACACCACCCATAGGAAAGAAAATCCTCGTATACGGCGGTTCAT
CAGCGGTTGGGGGCCTCGCGGTGCAATATGCGATCAATGCTGGGTATGAC
GTTGTCACTACCTCGTCCGCGGCCAACAGATCCATGGTGGAGAAACGCAA
CCCGACGCATATCATCGACCATAGCCGCTCCGACGAAGACGTAATCCGCG
AAATTCGGGAGAATGGGCCTTACGAGGGAATCTTCGAGGCGATCGGCTCC
ACCACAACAACCCAACGCATGGTGGCATTGCTACGCGAAACAGGGGGCAG
GTTCTTTTCTACCAGCCCTTCCCCTGGGGATGAGACCATCCCTGCTGGTA
TAGTAAAGGTATGGGCCGGATATTCTGAGACCCTCGTATCTGAGGCTGCC
CATCAACAACTGCGCACATGGTACATGGAAGCGTATTTACCGGCTGCACT
GAAGAAAGGTACGATGTGGCCGAGTCCGGCATTGTGGCTGGAAGGCGGGC
TTGGCTCCGCCCAGAAGGCATTGGACCTCCTGTATGAAGGTCACATCAGC
GGCCGAAAGGTTTTCATCAACCCACAGGAATAA
back to top

Coding sequence (CDS) from alignment at An06:522948..524030+

>CBS51388_004124-T1 ID=CBS51388_004124-T1|Name=CBS51388_004124-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2070bp|location=Sequence derived from alignment at An06:522948..524030+ (Aspergillus niger CBS 513.88)
ATGTCGAACCAAGCAGGCTGGGTCAAAACCCCATATGGGCGAGTTCAGGT
CGAGCCTGTAGAGCAATGGGTTCCTGGCCGTGGGGAACTCTTGGTTCGGG
TTGAAGCAGCTAGCTTTAACCCCATTGACGCCAAAATCCAGAGGTTGGAT
CTATTCCAATCTCAATACCCCCTCATCCTCGGATTCACCTTTGCGGGAAC
GGTAGTCTCTACAGGGCCCGAGATTAATTCCGTGCAACCTGGCGACCGGG
TGGTGGTGGCTCGCTGGGGCCAGCAAGCAGGCGAGGATCCCCGATTTGGG
GCCCTCCAGAGGTATGCACTGGCACTCGAGCAAAACACCCTGCGACTAGA
GCCCGAGACCACATTTGCCGATGCCGCCGGTCTGATCGCCAATCTGGCGA
CCGTGGTCTCCGCCCTCACCATCTACATGGGCCTCTCTAAGCCGCCAGTC
ACCGGCACGACACCACCCATAGGAAAGAAAATCCTCGTATACGGCGGTTC
ATCAGCGGTTGGGGGCCTCGCGGTGCAATATGCGATCAATGCTGGGTATG
ACGTTGTCACTACCTCGTCCGCGGCCAACAGATCCATGGTGGAGAAACGC
AACCCGACGCATATCATCGACCATAGCCGCTCCGACGAAGACGTAATCCG
CGAAATTCGGGAGAATGGGCCTTACGAGGGAATCTTCGAGGCGATCGGCT
CCACCACAACAACCCAACGCATGGTGGCATTGCTACGCGAAACAGGGGGC
AGGTTCTTTTCTACCAGCCCTTCCCCTGGGGATGAGACCATCCCTGCTGG
TATAGTAAAGGTATGGGCCGGATATTCTGAGACCCTCGTATCTGAGGCTG
CCCATCAACAACTGCGCACATGGTACATGGAAGCGTATTTACCGGCTGCA
CTGAAGAAAGGTACGATGTGGCCGAGTCCGGCATTGTGGCTGGAAGGCGG
GCTTGGCTCCGCCCAGAAGGCATTGGACCTCCTGTATGAAGGTCACATCA
GCGGCCGAAAGGTTTTCATCAACCCACAGGAATAAATGTCGAACCAAGCA
GGCTGGGTCAAAACCCCATATGGGCGAGTTCAGGTCGAGCCTGTAGAGCA
ATGGGTTCCTGGCCGTGGGGAACTCTTGGTTCGGGTTGAAGCAGCTAGCT
TTAACCCCATTGACGCCAAAATCCAGAGGTTGGATCTATTCCAATCTCAA
TACCCCCTCATCCTCGGATTCACCTTTGCGGGAACGGTAGTCTCTACAGG
GCCCGAGATTAATTCCGTGCAACCTGGCGACCGGGTGGTGGTGGCTCGCT
GGGGCCAGCAAGCAGGCGAGGATCCCCGATTTGGGGCCCTCCAGAGGTAT
GCACTGGCACTCGAGCAAAACACCCTGCGACTAGAGCCCGAGACCACATT
TGCCGATGCCGCCGGTCTGATCGCCAATCTGGCGACCGTGGTCTCCGCCC
TCACCATCTACATGGGCCTCTCTAAGCCGCCAGTCACCGGCACGACACCA
CCCATAGGAAAGAAAATCCTCGTATACGGCGGTTCATCAGCGGTTGGGGG
CCTCGCGGTGCAATATGCGATCAATGCTGGGTATGACGTTGTCACTACCT
CGTCCGCGGCCAACAGATCCATGGTGGAGAAACGCAACCCGACGCATATC
ATCGACCATAGCCGCTCCGACGAAGACGTAATCCGCGAAATTCGGGAGAA
TGGGCCTTACGAGGGAATCTTCGAGGCGATCGGCTCCACCACAACAACCC
AACGCATGGTGGCATTGCTACGCGAAACAGGGGGCAGGTTCTTTTCTACC
AGCCCTTCCCCTGGGGATGAGACCATCCCTGCTGGTATAGTAAAGGTATG
GGCCGGATATTCTGAGACCCTCGTATCTGAGGCTGCCCATCAACAACTGC
GCACATGGTACATGGAAGCGTATTTACCGGCTGCACTGAAGAAAGGTACG
ATGTGGCCGAGTCCGGCATTGTGGCTGGAAGGCGGGCTTGGCTCCGCCCA
GAAGGCATTGGACCTCCTGTATGAAGGTCACATCAGCGGCCGAAAGGTTT
TCATCAACCCACAGGAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004124CBS51388_004124Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004124-T1.exon1CBS51388_004124-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004124-T1.exon2CBS51388_004124-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004124-T1.cdsCBS51388_004124-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004124-T1CBS51388_004124-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR020843
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An06supercontigAn06:522948..524030 +
Powered by Drupal