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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:553775..556206+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004136-T1 ID=CBS51388_004136-T1|Name=CBS51388_004136-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2432bp|location=Sequence derived from alignment at An06:553775..556206+ (Aspergillus niger CBS 513.88)
ATGAGAGAACGCCAACCTCATCGCGAAGACTACACCGTAGGCTGGGTCTG
CGCTCTGCCGATCGAACTAGCAGCCGCACAAGCAATGCTAGACACCGAAC
ACTCCAGCATACGCCTGCAGATCGATGATCCCAGCATATTCATCCTAGGA
AATATAGCCGGGCACAATGTTGTGATTACATGTCTCCCAGATGGACAAAT
AGGCACCAGCTCCGCTGCGACCGTGGCAATCCAAATGCGCTCCGCGTTTC
CGTCAATCAGGTTCGGTCTCATGGTGGGAATCGGCGGGGGCGTCCCCAGC
CCTGAGCATGACATTCGGCTGGGAGATGTGGTCGTCGGTCGACCGGATAA
TCAAACTGGGGGTGTGGTGCAGTATGATTTTGGGAAGAGCACATCGAGTG
GGTTTGTACGCACGGGGTTTTTGAATGCGCCCCCGGTTATCTTGCTGAAT
GCAGTAGCCCTGTTACGGGCGAGGCATTTTCTGGGGAGGGGAACGATGAC
TGAGTATACGGAAAAATTGAAGGAAATGCCTGCTTTTACGCGCAATAAAG
ATAAAAATAGGGATATCCTGTTCGAGGCGGGGTATAACCATGCTGGAGGT
GCGACGTGTGAGAAATGCGACGAGGAACGATCAATCCAACGCGATGAACG
TGAAGGTCATGGCATTATGGTGCATTATGGAACAATTGCGTCAGGGAATC
AAGTACTCAAGGACGCGCATGAACGAGACCGACTCGCAGCAGAATTGGGA
GGGGTGTTGTGCTTTGAGATGGAGGCTGCCGGGCTGGTGAATAATTTCCC
ATGCTTGGTAATCCGAGGGATTTGTGACTATGCCGATTCGCATAAGAATA
AGAATTGGCAACCTTCTGCTGCCGGCGTCGCCGCTGGTTATGCGAAGGAG
TTGTTGTCGGTTATACCACCAGGGCATGTGGAGAGAACGAAGCCTATGAG
GAGAAATGGTCTGTATTCACACTTGGTTTGTTGCGAGAGTATATGCTCTG
CTGACTGTTTGTCGCAGCACCCAGAAAAACCTTCATGGTTCCCTTTCAGA
GGAATGGAAATTTCGCTGGCAGTGATTCTATAATGAGCGAGCTTGCTAGA
AGATATGATACAGCCGCGTTTGAACATTATCTCGGTATAGCTCTCGTTGG
AAATAAAGGCATAGGGTGAGAAAGTCACTCTCATACCAATCATGATAACT
CTCACTAACACTGATTCAGTAAAACATACATCGCCCTAGAGTATGCCTAC
CGAAGCCAACAACACATGCCCTGGCTATCCGTATTCTGGATATACGCAAG
CAGCATCTCCCGATACAGAAGGTCGTATCAAGATCTAGCTGACCGTCTTG
ATCTACCCGGAAAAGACGACCCAGCAGTCGATATTGTGGAACTGGTATCG
GACTGGCTCACTGATGAAGAAAATGGGCCATGGCTGATGATTCTGGACAA
TGTGGAAAATGTAGGTCTTTCCCAAGAGACGGGGCTTCCTGTTCTGCTGG
AGAATGACGTGACGGAGAAGATTCCGATTTTATCGTTGGCTCCAGAAGCA
AAACATGGCTCTTTGCTGGTGACGTCGCGCAATTTGGAGGCAGCGATGAG
TATCGTCGGTTCAGCTGAGAACATTGTCCATGTGCAGCAGAGGGATGAAG
GGCCAAAAAGCTTACTTGATAATGGGAAAGATCTACTAGCGAACCTTGAT
CTGAACAGCCCCAAAGATGGTCGGACACCACTATCGTGGGCTGCAGAAGC
AGGTATTGTGCCAGTCGTGAAATTGTTGCTTGCTACTGGTAAAGTGGACG
TCGACACCAGAGACTCACATTATGGTCGAACGCCTCTATCATGGGCTGCA
GGGGCTGGTCATGCAGAAATTGTTCAGCTCCTTCTGGAAACCAACAAAGT
GGATATCAACTCCGTCGATTACCAAAACCGGCCGCCACTGACCTGGGCGC
TATTTAATTCTCTAGAGCGAATGAAACCGGTTGTCAAGCTGCTTCTAGCC
ACCGGCCGAGCCGACCTAAACATCCGTGATGAATCATCAGACCGCACAGC
CCTTTCTTGGGTGTGTGGAGGGGGCCACCTGGAAATCGTTAAATGGCTGC
TTGAAACCGGTAAGGCGGACGTTAACACCATTGAGAAATACCACGGGCGA
ACTCCTCTTTCCTGGGCTGCATTTGACAGGCATCAGGAAATCATGAAGGT
GTTAATCGCGACGGGACAGGCGGACCTGGAAGCAAGAGATAGAGAAGAGG
GTCGGACTGTGCTATCTTGGGCGGCGGGCAATGGACTTGAAGCCGGGGTG
AGAGCTTTGTTAGAAACTGGAAAGGTGGACGTCAATTCCAAAGATCGGAA
TAGAAGGACACCGCTATTCTGGGCATTAAGCAATGGGCATCAGAATACGG
CTCTTCTTCTAGAGGAGGCTTTGAGCGGATAA back to topCoding sequence (CDS) from alignment at An06:553775..556206+ >CBS51388_004136-T1 ID=CBS51388_004136-T1|Name=CBS51388_004136-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6957bp|location=Sequence derived from alignment at An06:553775..556206+ (Aspergillus niger CBS 513.88)
ATGAGAGAACGCCAACCTCATCGCGAAGACTACACCGTAGGCTGGGTCTG
CGCTCTGCCGATCGAACTAGCAGCCGCACAAGCAATGCTAGACACCGAAC
ACTCCAGCATACGCCTGCAGATCGATGATCCCAGCATATTCATCCTAGGA
AATATAGCCGGGCACAATGTTGTGATTACATGTCTCCCAGATGGACAAAT
AGGCACCAGCTCCGCTGCGACCGTGGCAATCCAAATGCGCTCCGCGTTTC
CGTCAATCAGGTTCGGTCTCATGGTGGGAATCGGCGGGGGCGTCCCCAGC
CCTGAGCATGACATTCGGCTGGGAGATGTGGTCGTCGGTCGACCGGATAA
TCAAACTGGGGGTGTGGTGCAGTATGATTTTGGGAAGAGCACATCGAGTG
GGTTTGTACGCACGGGGTTTTTGAATGCGCCCCCGGTTATCTTGCTGAAT
GCAGTAGCCCTGTTACGGGCGAGGCATTTTCTGGGGAGGGGAACGATGAC
TGAGTATACGGAAAAATTGAAGGAAATGCCTGCTTTTACGCGCAATAAAG
ATAAAAATAGGGATATCCTGTTCGAGGCGGGGTATAACCATGCTGGAGGT
GCGACGTGTGAGAAATGCGACGAGGAACGATCAATCCAACGCGATGAACG
TGAAGGTCATGGCATTATGGTGCATTATGGAACAATTGCGTCAGGGAATC
AAGTACTCAAGGACGCGCATGAACGAGACCGACTCGCAGCAGAATTGGGA
GGGGTGTTGTGCTTTGAGATGGAGGCTGCCGGGCTGGTGAATAATTTCCC
ATGCTTGGTAATCCGAGGGATTTGTGACTATGCCGATTCGCATAAGAATA
AGAATTGGCAACCTTCTGCTGCCGGCGTCGCCGCTGGTTATGCGAAGGAG
TTGTTGTCGGTTATACCACCAGGGCATGTGGAGAGAACGAAGCCTATGAG
GAGAAATGCACCCAGAAAAACCTTCATGGTTCCCTTTCAGAGGAATGGAA
ATTTCGCTGGCAGTGATTCTATAATGAGCGAGCTTGCTAGAAGATATGAT
ACAGCCGCGTTTGAACATTATCTCGGTATAGCTCTCGTTGGAAATAAAGG
CATAGGTAAAACATACATCGCCCTAGAGTATGCCTACCGAAGCCAACAAC
ACATGCCCTGGCTATCCGTATTCTGGATATACGCAAGCAGCATCTCCCGA
TACAGAAGGTCGTATCAAGATCTAGCTGACCGTCTTGATCTACCCGGAAA
AGACGACCCAGCAGTCGATATTGTGGAACTGGTATCGGACTGGCTCACTG
ATGAAGAAAATGGGCCATGGCTGATGATTCTGGACAATGTGGAAAATGTA
GGTCTTTCCCAAGAGACGGGGCTTCCTGTTCTGCTGGAGAATGACGTGAC
GGAGAAGATTCCGATTTTATCGTTGGCTCCAGAAGCAAAACATGGCTCTT
TGCTGGTGACGTCGCGCAATTTGGAGGCAGCGATGAGTATCGTCGGTTCA
GCTGAGAACATTGTCCATGTGCAGCAGAGGGATGAAGGGCCAAAAAGCTT
ACTTGATAATGGGAAAGATCTACTAGCGAACCTTGATCTGAACAGCCCCA
AAGATGGTCGGACACCACTATCGTGGGCTGCAGAAGCAGGTATTGTGCCA
GTCGTGAAATTGTTGCTTGCTACTGGTAAAGTGGACGTCGACACCAGAGA
CTCACATTATGGTCGAACGCCTCTATCATGGGCTGCAGGGGCTGGTCATG
CAGAAATTGTTCAGCTCCTTCTGGAAACCAACAAAGTGGATATCAACTCC
GTCGATTACCAAAACCGGCCGCCACTGACCTGGGCGCTATTTAATTCTCT
AGAGCGAATGAAACCGGTTGTCAAGCTGCTTCTAGCCACCGGCCGAGCCG
ACCTAAACATCCGTGATGAATCATCAGACCGCACAGCCCTTTCTTGGGTG
TGTGGAGGGGGCCACCTGGAAATCGTTAAATGGCTGCTTGAAACCGGTAA
GGCGGACGTTAACACCATTGAGAAATACCACGGGCGAACTCCTCTTTCCT
GGGCTGCATTTGACAGGCATCAGGAAATCATGAAGGTGTTAATCGCGACG
GGACAGGCGGACCTGGAAGCAAGAGATAGAGAAGAGGGTCGGACTGTGCT
ATCTTGGGCGGCGGGCAATGGACTTGAAGCCGGGGTGAGAGCTTTGTTAG
AAACTGGAAAGGTGGACGTCAATTCCAAAGATCGGAATAGAAGGACACCG
CTATTCTGGGCATTAAGCAATGGGCATCAGAATACGGCTCTTCTTCTAGA
GGAGGCTTTGAGCGGATAAATGAGAGAACGCCAACCTCATCGCGAAGACT
ACACCGTAGGCTGGGTCTGCGCTCTGCCGATCGAACTAGCAGCCGCACAA
GCAATGCTAGACACCGAACACTCCAGCATACGCCTGCAGATCGATGATCC
CAGCATATTCATCCTAGGAAATATAGCCGGGCACAATGTTGTGATTACAT
GTCTCCCAGATGGACAAATAGGCACCAGCTCCGCTGCGACCGTGGCAATC
CAAATGCGCTCCGCGTTTCCGTCAATCAGGTTCGGTCTCATGGTGGGAAT
CGGCGGGGGCGTCCCCAGCCCTGAGCATGACATTCGGCTGGGAGATGTGG
TCGTCGGTCGACCGGATAATCAAACTGGGGGTGTGGTGCAGTATGATTTT
GGGAAGAGCACATCGAGTGGGTTTGTACGCACGGGGTTTTTGAATGCGCC
CCCGGTTATCTTGCTGAATGCAGTAGCCCTGTTACGGGCGAGGCATTTTC
TGGGGAGGGGAACGATGACTGAGTATACGGAAAAATTGAAGGAAATGCCT
GCTTTTACGCGCAATAAAGATAAAAATAGGGATATCCTGTTCGAGGCGGG
GTATAACCATGCTGGAGGTGCGACGTGTGAGAAATGCGACGAGGAACGAT
CAATCCAACGCGATGAACGTGAAGGTCATGGCATTATGGTGCATTATGGA
ACAATTGCGTCAGGGAATCAAGTACTCAAGGACGCGCATGAACGAGACCG
ACTCGCAGCAGAATTGGGAGGGGTGTTGTGCTTTGAGATGGAGGCTGCCG
GGCTGGTGAATAATTTCCCATGCTTGGTAATCCGAGGGATTTGTGACTAT
GCCGATTCGCATAAGAATAAGAATTGGCAACCTTCTGCTGCCGGCGTCGC
CGCTGGTTATGCGAAGGAGTTGTTGTCGGTTATACCACCAGGGCATGTGG
AGAGAACGAAGCCTATGAGGAGAAATGCACCCAGAAAAACCTTCATGGTT
CCCTTTCAGAGGAATGGAAATTTCGCTGGCAGTGATTCTATAATGAGCGA
GCTTGCTAGAAGATATGATACAGCCGCGTTTGAACATTATCTCGGTATAG
CTCTCGTTGGAAATAAAGGCATAGGTAAAACATACATCGCCCTAGAGTAT
GCCTACCGAAGCCAACAACACATGCCCTGGCTATCCGTATTCTGGATATA
CGCAAGCAGCATCTCCCGATACAGAAGGTCGTATCAAGATCTAGCTGACC
GTCTTGATCTACCCGGAAAAGACGACCCAGCAGTCGATATTGTGGAACTG
GTATCGGACTGGCTCACTGATGAAGAAAATGGGCCATGGCTGATGATTCT
GGACAATGTGGAAAATGTAGGTCTTTCCCAAGAGACGGGGCTTCCTGTTC
TGCTGGAGAATGACGTGACGGAGAAGATTCCGATTTTATCGTTGGCTCCA
GAAGCAAAACATGGCTCTTTGCTGGTGACGTCGCGCAATTTGGAGGCAGC
GATGAGTATCGTCGGTTCAGCTGAGAACATTGTCCATGTGCAGCAGAGGG
ATGAAGGGCCAAAAAGCTTACTTGATAATGGGAAAGATCTACTAGCGAAC
CTTGATCTGAACAGCCCCAAAGATGGTCGGACACCACTATCGTGGGCTGC
AGAAGCAGGTATTGTGCCAGTCGTGAAATTGTTGCTTGCTACTGGTAAAG
TGGACGTCGACACCAGAGACTCACATTATGGTCGAACGCCTCTATCATGG
GCTGCAGGGGCTGGTCATGCAGAAATTGTTCAGCTCCTTCTGGAAACCAA
CAAAGTGGATATCAACTCCGTCGATTACCAAAACCGGCCGCCACTGACCT
GGGCGCTATTTAATTCTCTAGAGCGAATGAAACCGGTTGTCAAGCTGCTT
CTAGCCACCGGCCGAGCCGACCTAAACATCCGTGATGAATCATCAGACCG
CACAGCCCTTTCTTGGGTGTGTGGAGGGGGCCACCTGGAAATCGTTAAAT
GGCTGCTTGAAACCGGTAAGGCGGACGTTAACACCATTGAGAAATACCAC
GGGCGAACTCCTCTTTCCTGGGCTGCATTTGACAGGCATCAGGAAATCAT
GAAGGTGTTAATCGCGACGGGACAGGCGGACCTGGAAGCAAGAGATAGAG
AAGAGGGTCGGACTGTGCTATCTTGGGCGGCGGGCAATGGACTTGAAGCC
GGGGTGAGAGCTTTGTTAGAAACTGGAAAGGTGGACGTCAATTCCAAAGA
TCGGAATAGAAGGACACCGCTATTCTGGGCATTAAGCAATGGGCATCAGA
ATACGGCTCTTCTTCTAGAGGAGGCTTTGAGCGGATAAATGAGAGAACGC
CAACCTCATCGCGAAGACTACACCGTAGGCTGGGTCTGCGCTCTGCCGAT
CGAACTAGCAGCCGCACAAGCAATGCTAGACACCGAACACTCCAGCATAC
GCCTGCAGATCGATGATCCCAGCATATTCATCCTAGGAAATATAGCCGGG
CACAATGTTGTGATTACATGTCTCCCAGATGGACAAATAGGCACCAGCTC
CGCTGCGACCGTGGCAATCCAAATGCGCTCCGCGTTTCCGTCAATCAGGT
TCGGTCTCATGGTGGGAATCGGCGGGGGCGTCCCCAGCCCTGAGCATGAC
ATTCGGCTGGGAGATGTGGTCGTCGGTCGACCGGATAATCAAACTGGGGG
TGTGGTGCAGTATGATTTTGGGAAGAGCACATCGAGTGGGTTTGTACGCA
CGGGGTTTTTGAATGCGCCCCCGGTTATCTTGCTGAATGCAGTAGCCCTG
TTACGGGCGAGGCATTTTCTGGGGAGGGGAACGATGACTGAGTATACGGA
AAAATTGAAGGAAATGCCTGCTTTTACGCGCAATAAAGATAAAAATAGGG
ATATCCTGTTCGAGGCGGGGTATAACCATGCTGGAGGTGCGACGTGTGAG
AAATGCGACGAGGAACGATCAATCCAACGCGATGAACGTGAAGGTCATGG
CATTATGGTGCATTATGGAACAATTGCGTCAGGGAATCAAGTACTCAAGG
ACGCGCATGAACGAGACCGACTCGCAGCAGAATTGGGAGGGGTGTTGTGC
TTTGAGATGGAGGCTGCCGGGCTGGTGAATAATTTCCCATGCTTGGTAAT
CCGAGGGATTTGTGACTATGCCGATTCGCATAAGAATAAGAATTGGCAAC
CTTCTGCTGCCGGCGTCGCCGCTGGTTATGCGAAGGAGTTGTTGTCGGTT
ATACCACCAGGGCATGTGGAGAGAACGAAGCCTATGAGGAGAAATGCACC
CAGAAAAACCTTCATGGTTCCCTTTCAGAGGAATGGAAATTTCGCTGGCA
GTGATTCTATAATGAGCGAGCTTGCTAGAAGATATGATACAGCCGCGTTT
GAACATTATCTCGGTATAGCTCTCGTTGGAAATAAAGGCATAGGTAAAAC
ATACATCGCCCTAGAGTATGCCTACCGAAGCCAACAACACATGCCCTGGC
TATCCGTATTCTGGATATACGCAAGCAGCATCTCCCGATACAGAAGGTCG
TATCAAGATCTAGCTGACCGTCTTGATCTACCCGGAAAAGACGACCCAGC
AGTCGATATTGTGGAACTGGTATCGGACTGGCTCACTGATGAAGAAAATG
GGCCATGGCTGATGATTCTGGACAATGTGGAAAATGTAGGTCTTTCCCAA
GAGACGGGGCTTCCTGTTCTGCTGGAGAATGACGTGACGGAGAAGATTCC
GATTTTATCGTTGGCTCCAGAAGCAAAACATGGCTCTTTGCTGGTGACGT
CGCGCAATTTGGAGGCAGCGATGAGTATCGTCGGTTCAGCTGAGAACATT
GTCCATGTGCAGCAGAGGGATGAAGGGCCAAAAAGCTTACTTGATAATGG
GAAAGATCTACTAGCGAACCTTGATCTGAACAGCCCCAAAGATGGTCGGA
CACCACTATCGTGGGCTGCAGAAGCAGGTATTGTGCCAGTCGTGAAATTG
TTGCTTGCTACTGGTAAAGTGGACGTCGACACCAGAGACTCACATTATGG
TCGAACGCCTCTATCATGGGCTGCAGGGGCTGGTCATGCAGAAATTGTTC
AGCTCCTTCTGGAAACCAACAAAGTGGATATCAACTCCGTCGATTACCAA
AACCGGCCGCCACTGACCTGGGCGCTATTTAATTCTCTAGAGCGAATGAA
ACCGGTTGTCAAGCTGCTTCTAGCCACCGGCCGAGCCGACCTAAACATCC
GTGATGAATCATCAGACCGCACAGCCCTTTCTTGGGTGTGTGGAGGGGGC
CACCTGGAAATCGTTAAATGGCTGCTTGAAACCGGTAAGGCGGACGTTAA
CACCATTGAGAAATACCACGGGCGAACTCCTCTTTCCTGGGCTGCATTTG
ACAGGCATCAGGAAATCATGAAGGTGTTAATCGCGACGGGACAGGCGGAC
CTGGAAGCAAGAGATAGAGAAGAGGGTCGGACTGTGCTATCTTGGGCGGC
GGGCAATGGACTTGAAGCCGGGGTGAGAGCTTTGTTAGAAACTGGAAAGG
TGGACGTCAATTCCAAAGATCGGAATAGAAGGACACCGCTATTCTGGGCA
TTAAGCAATGGGCATCAGAATACGGCTCTTCTTCTAGAGGAGGCTTTGAG
CGGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009116 | nucleoside metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR035994 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR000845 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF01048 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:553775..556206 + |
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