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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:570218..571909+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004137-T1 ID=CBS51388_004137-T1|Name=CBS51388_004137-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1692bp|location=Sequence derived from alignment at An06:570218..571909+ (Aspergillus niger CBS 513.88)
ATGGGCGATAATTATGAGGAAAAGCCTGACGCCATTGGCAAAGAGTTCAG
CGATGAACTCACGCCCGAGGAGCGTGAGCACGAGATCGAGGCACGCGATC
TGCAAAGCAATCAGTATCTCGACAACGAACCATTGTATGACCGGATAGCG
TTCGCGCAGATACCAGTGCACATGAGGAGCCCTCGCATGCTAGTCATCAC
ACTGGGCGTGTTCGCGGCGTTCAGCGGCATGCTGAGTGGGTTAGACCAGT
CGGTGATCTCGGGCGCCCTGCCTGGTATCCGCAAGCATTTCATCGCGTCA
GGCGAGTGGGCGAGCATGGACGACCCGAAACTGGCGACCGACATTTCACT
GATTTCGTCACTGATGCCGCTGGGCGCCATGGCCGGCGCGCTCATCATGA
CGCCGCTGAACTTCTACTTTGGACGCCGCAACTCGATTATCATCTCGTGT
TTGTGGTACACACTGGGCAGTGGACTTTGTGCGGGCTCCCGTAGTGTGGG
GATGCTGTTTGCGGGCCGCTTCATTCTGGGCATCGGTATCGGAATCGAAG
GCGGCTGTGTCGGTATCTACATCTCCGAGTGTGTGCCGCCAGAGGTGCGT
GGCAACCTGGTGTCGGTATACCAGCTGATGATCGCATTCGGAGAGATCAT
CGGATACGCCGCCGGCGGCGTATTCTTTGACGTCCCGTCAGGCAGCTGGC
GCTGGATGCTGGGCTCGTCTCTCTTGTTTTCGACGATCCTCCTGGTTGGG
ATGGCCTTCCTGCCAGAATCACCGCGCTGGCTGGCATCCAAGGGCAAGTA
CGGGCGCGCGTGGCGGGTGTGGAAGTCGCTGCGCGACATGGCCGACCCCA
AAAGCCTGGACGAGTACCTTGCGATGGAAGTTACAGTCAAACATGATGTC
GACCAGTCCGCGAACGTGAAATGGCATCAGAGGTATCTGGAGGTGTGCAG
GACGCCGCGCAACCGACGGGCGCTTGTATATGCCACGGCTATGATATTTT
TCGGGCAGATGACGGGCATCAATGCGGTCATGTACAATATGTCAAACTTG
ATGGCCAAGATGAACTTTGATGACCGCGAGTCAGTGCTGATGTCGATGGT
GGGCGGTGGCGCGTTGTTCCTGGGAACAATTCCTGCTGTGTTCACGATGG
ACAAGTTTGGGCGCCGGGTGTGGGCGCAAAACATCCTGATGTTCATCGTG
GGTCTGGCGCTGGTGGGCGTCGGCTACCTATACACGAACAATGGTGTTGA
TTATTTCAATGAGCATAAGGCAACGGCCTTGGGGTTGTTTTTCTCCGGTC
TGGTGCTGTACATGGCGTTCTTCGGGGCATATTCGTGCCTGACCTGGGTA
GTGCCAGCGGAGAGCTTTAGTTTCAACACCCGCAGCCAGGGCATGGCGAT
CTGCTCTGTATTCCTTTATCTGTGGTCATTCATTGTGACATACAACTTCG
AAGGGATGCAGAAAGCGATGACCTACACCGGCCTGACAATCGGTTTCTTC
GGCGGCTTGGCCGCGCTAGGCTTCTTTTACCAGCTGTTCTTTATGCCCGA
GACCAAAGACAAAACATTGGAGGAGATCGACGAGTTGTTTCTAATGCCGA
CAAGTAAGCTGGTTGCGCTGAACACAAGCAATCTGCTTAAGCCCCTCCGG
CGGCGACACCGGCCAGAGCCGGTCGATAACTACAACGCCTAA back to topCoding sequence (CDS) from alignment at An06:570218..571909+ >CBS51388_004137-T1 ID=CBS51388_004137-T1|Name=CBS51388_004137-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1692bp|location=Sequence derived from alignment at An06:570218..571909+ (Aspergillus niger CBS 513.88)
ATGGGCGATAATTATGAGGAAAAGCCTGACGCCATTGGCAAAGAGTTCAG
CGATGAACTCACGCCCGAGGAGCGTGAGCACGAGATCGAGGCACGCGATC
TGCAAAGCAATCAGTATCTCGACAACGAACCATTGTATGACCGGATAGCG
TTCGCGCAGATACCAGTGCACATGAGGAGCCCTCGCATGCTAGTCATCAC
ACTGGGCGTGTTCGCGGCGTTCAGCGGCATGCTGAGTGGGTTAGACCAGT
CGGTGATCTCGGGCGCCCTGCCTGGTATCCGCAAGCATTTCATCGCGTCA
GGCGAGTGGGCGAGCATGGACGACCCGAAACTGGCGACCGACATTTCACT
GATTTCGTCACTGATGCCGCTGGGCGCCATGGCCGGCGCGCTCATCATGA
CGCCGCTGAACTTCTACTTTGGACGCCGCAACTCGATTATCATCTCGTGT
TTGTGGTACACACTGGGCAGTGGACTTTGTGCGGGCTCCCGTAGTGTGGG
GATGCTGTTTGCGGGCCGCTTCATTCTGGGCATCGGTATCGGAATCGAAG
GCGGCTGTGTCGGTATCTACATCTCCGAGTGTGTGCCGCCAGAGGTGCGT
GGCAACCTGGTGTCGGTATACCAGCTGATGATCGCATTCGGAGAGATCAT
CGGATACGCCGCCGGCGGCGTATTCTTTGACGTCCCGTCAGGCAGCTGGC
GCTGGATGCTGGGCTCGTCTCTCTTGTTTTCGACGATCCTCCTGGTTGGG
ATGGCCTTCCTGCCAGAATCACCGCGCTGGCTGGCATCCAAGGGCAAGTA
CGGGCGCGCGTGGCGGGTGTGGAAGTCGCTGCGCGACATGGCCGACCCCA
AAAGCCTGGACGAGTACCTTGCGATGGAAGTTACAGTCAAACATGATGTC
GACCAGTCCGCGAACGTGAAATGGCATCAGAGGTATCTGGAGGTGTGCAG
GACGCCGCGCAACCGACGGGCGCTTGTATATGCCACGGCTATGATATTTT
TCGGGCAGATGACGGGCATCAATGCGGTCATGTACAATATGTCAAACTTG
ATGGCCAAGATGAACTTTGATGACCGCGAGTCAGTGCTGATGTCGATGGT
GGGCGGTGGCGCGTTGTTCCTGGGAACAATTCCTGCTGTGTTCACGATGG
ACAAGTTTGGGCGCCGGGTGTGGGCGCAAAACATCCTGATGTTCATCGTG
GGTCTGGCGCTGGTGGGCGTCGGCTACCTATACACGAACAATGGTGTTGA
TTATTTCAATGAGCATAAGGCAACGGCCTTGGGGTTGTTTTTCTCCGGTC
TGGTGCTGTACATGGCGTTCTTCGGGGCATATTCGTGCCTGACCTGGGTA
GTGCCAGCGGAGAGCTTTAGTTTCAACACCCGCAGCCAGGGCATGGCGAT
CTGCTCTGTATTCCTTTATCTGTGGTCATTCATTGTGACATACAACTTCG
AAGGGATGCAGAAAGCGATGACCTACACCGGCCTGACAATCGGTTTCTTC
GGCGGCTTGGCCGCGCTAGGCTTCTTTTACCAGCTGTTCTTTATGCCCGA
GACCAAAGACAAAACATTGGAGGAGATCGACGAGTTGTTTCTAATGCCGA
CAAGTAAGCTGGTTGCGCTGAACACAAGCAATCTGCTTAAGCCCCTCCGG
CGGCGACACCGGCCAGAGCCGGTCGATAACTACAACGCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:570218..571909 + |
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