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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:623444..624541+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004150-T1 ID=CBS51388_004150-T1|Name=CBS51388_004150-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1098bp|location=Sequence derived from alignment at An06:623444..624541+ (Aspergillus niger CBS 513.88)
ATGTTCTACCTTAGGTATCTCCCATTCGTGGCCACCCCCCTTCTTGCTGC
GAGTGCCTTCAGCCACGCGTCGGGAGCCGAAGACTTGGCTGTCCTTGCCG
GACAGCACATCGTTTACACCTATCCCGGCATCAGTCCGCCGGATGCCTTG
TTCGATCTCGTGAATGAGGGCAAAGTCGGGGGCCTCATTCTCTTTCGCGA
AAACATCAACCAGACAAATTTGACAGAAACATCAGTATTGATGAGAAAGT
TACAACAAGCACACGCCAAATCCCCTGCGTATAAGGGCCTCCCACTGCCA
ATCATGATCGACCAGGAGGGCGGCTATGTGAAGCGTATTACCAACGGAGG
ACCATGGGAGTCTGCTAAAGAGATGGGGCTCGCTAGAGACCCTACTCTCG
CATCGTCGCACGGAGGCAGTGCTGCAGCTGATGCCCTTGTAGCAGCCGGA
GTTAACGTTAATCTTGCTCCAGTATTGGATGTTTACCGCGAGGAGTCAAG
CTTCATGAACTACTGGCAACGATCATTTGGGAATACATCCTCGCTTGTCA
CCCGTTGTGCGGTTTCTTTCCTCTCAGCTATGCGGAAAAAAGGAATTGCG
GCAGCTGGAAAGCACTTCCCTGGAAACGGTGCTAATCCAGCTGGCAACGA
CACAGACGCCGGCGTTGTTACTCTTGACCTAACTCTCGACGAGATTCGAG
CTGTGGATGAAATCCCATACCGTTCAGCTATCCAGGCAGGCCTTGGTTTG
ATCATGGCCTCATGGAGCAAGTATATCATGGTAGATGACCGGCCGGCAGG
ATTGAGCAGGAAATGGCTTGAGGGAGAACTACGAAGCAGATTAGGATACA
ATGGCGTGATCATGACGGATGCGCTTGAGGCTGGAGCAGTAAAGCCGTAT
GGGGACTGGTCTACAGTAGCACTTCTAGCCAAGCAAGCAGGTGCAGACAT
GATCCTTTGTGCTTCACGAAACCTGACCGAGGGCCTGATGGCGACAGAAG
GACTCGTTGCGGGGTTGAAGAATGGAAGCTTATCTCGAACAGCCTTGGAG
GCATCATTCGAGCGAATTATGGCTTTCCGGAGTACCCTGCGAGGGTGA back to topCoding sequence (CDS) from alignment at An06:623444..624541+ >CBS51388_004150-T1 ID=CBS51388_004150-T1|Name=CBS51388_004150-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1098bp|location=Sequence derived from alignment at An06:623444..624541+ (Aspergillus niger CBS 513.88)
ATGTTCTACCTTAGGTATCTCCCATTCGTGGCCACCCCCCTTCTTGCTGC
GAGTGCCTTCAGCCACGCGTCGGGAGCCGAAGACTTGGCTGTCCTTGCCG
GACAGCACATCGTTTACACCTATCCCGGCATCAGTCCGCCGGATGCCTTG
TTCGATCTCGTGAATGAGGGCAAAGTCGGGGGCCTCATTCTCTTTCGCGA
AAACATCAACCAGACAAATTTGACAGAAACATCAGTATTGATGAGAAAGT
TACAACAAGCACACGCCAAATCCCCTGCGTATAAGGGCCTCCCACTGCCA
ATCATGATCGACCAGGAGGGCGGCTATGTGAAGCGTATTACCAACGGAGG
ACCATGGGAGTCTGCTAAAGAGATGGGGCTCGCTAGAGACCCTACTCTCG
CATCGTCGCACGGAGGCAGTGCTGCAGCTGATGCCCTTGTAGCAGCCGGA
GTTAACGTTAATCTTGCTCCAGTATTGGATGTTTACCGCGAGGAGTCAAG
CTTCATGAACTACTGGCAACGATCATTTGGGAATACATCCTCGCTTGTCA
CCCGTTGTGCGGTTTCTTTCCTCTCAGCTATGCGGAAAAAAGGAATTGCG
GCAGCTGGAAAGCACTTCCCTGGAAACGGTGCTAATCCAGCTGGCAACGA
CACAGACGCCGGCGTTGTTACTCTTGACCTAACTCTCGACGAGATTCGAG
CTGTGGATGAAATCCCATACCGTTCAGCTATCCAGGCAGGCCTTGGTTTG
ATCATGGCCTCATGGAGCAAGTATATCATGGTAGATGACCGGCCGGCAGG
ATTGAGCAGGAAATGGCTTGAGGGAGAACTACGAAGCAGATTAGGATACA
ATGGCGTGATCATGACGGATGCGCTTGAGGCTGGAGCAGTAAAGCCGTAT
GGGGACTGGTCTACAGTAGCACTTCTAGCCAAGCAAGCAGGTGCAGACAT
GATCCTTTGTGCTTCACGAAACCTGACCGAGGGCCTGATGGCGACAGAAG
GACTCGTTGCGGGGTTGAAGAATGGAAGCTTATCTCGAACAGCCTTGGAG
GCATCATTCGAGCGAATTATGGCTTTCCGGAGTACCCTGCGAGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-25) |
| Note | CAZy:GH3 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR036962 |
| DBxref | InterPro:IPR001764 |
| DBxref | PFAM:PF00933 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:623444..624541 + |
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