You are here

Home

CBS51388_004171-T1, CBS51388_004171-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004171-T1
Unique NameCBS51388_004171-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An06:680009..680518+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004171-T1 ID=CBS51388_004171-T1|Name=CBS51388_004171-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=510bp|location=Sequence derived from alignment at An06:680009..680518+ (Aspergillus niger CBS 513.88)
ATGGGAAAAGCGGATATTCCACTCTCCCTCCACGATAAGGTAGCTCTCGT
TACGGGTGGCGGGTCTGGTATTGGTTTCGCCGCGGCCCTTTCTTTGGCCC
AGGCAGGAGCCAAGGTCGTGATAGCGGACATCAACGAGACTCGCGGGAAG
GCTAGTACTCTGAAGATCAGCCAACTGGCCCATAATGTCCACTTTGTCCC
CGTTGGTGTGAGCCAGTCAGCTAGTGTGCGCGAAATGATCGATACCACTG
TGCGGGTCTACGGTCGTCTGGATATAGCAGTCAACAACGCTGGCATTGGC
CCAGACTCAGTGGCCATCGCAAACCTGGATGAAGGCAGCTGGGATCGCTT
GATCGCTACCAATCTCACTGGTGTGGCTCTTTGCTTGAAGTGGGAGTTGC
AGCAGATAATCGCACAGGGTGGTGGTCATCTGCATGCACATTGCGACCAC
ACGAGGGCATGGCAGCCTACGCCGCGACAAAGCACGGGATCCTTGGCCTC
ACCCGGGTAG
back to top

Coding sequence (CDS) from alignment at An06:680009..680518+

>CBS51388_004171-T1 ID=CBS51388_004171-T1|Name=CBS51388_004171-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=510bp|location=Sequence derived from alignment at An06:680009..680518+ (Aspergillus niger CBS 513.88)
ATGGGAAAAGCGGATATTCCACTCTCCCTCCACGATAAGGTAGCTCTCGT
TACGGGTGGCGGGTCTGGTATTGGTTTCGCCGCGGCCCTTTCTTTGGCCC
AGGCAGGAGCCAAGGTCGTGATAGCGGACATCAACGAGACTCGCGGGAAG
GCTAGTACTCTGAAGATCAGCCAACTGGCCCATAATGTCCACTTTGTCCC
CGTTGGTGTGAGCCAGTCAGCTAGTGTGCGCGAAATGATCGATACCACTG
TGCGGGTCTACGGTCGTCTGGATATAGCAGTCAACAACGCTGGCATTGGC
CCAGACTCAGTGGCCATCGCAAACCTGGATGAAGGCAGCTGGGATCGCTT
GATCGCTACCAATCTCACTGGTGTGGCTCTTTGCTTGAAGTGGGAGTTGC
AGCAGATAATCGCACAGGGTGGTGGTCATCTGCATGCACATTGCGACCAC
ACGAGGGCATGGCAGCCTACGCCGCGACAAAGCACGGGATCCTTGGCCTC
ACCCGGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004171CBS51388_004171Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004171-T1.exon1CBS51388_004171-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004171-T1.cdsCBS51388_004171-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004171-T1CBS51388_004171-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An06supercontigAn06:680009..680518 +
Powered by Drupal