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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:41980..43576- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004189-T1 ID=CBS51388_004189-T1|Name=CBS51388_004189-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1597bp|location=Sequence derived from alignment at An07:41980..43576- (Aspergillus niger CBS 513.88)
ATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTGGCCATTGGAGG
TAGACATTTTTTCTCCTACTTCCTCTTGAACATAAAGGTGGAAACTCATT
AATAACTCCGGTGACGACGAATAGGCTTTCTTTTCGGATATGACAGTGGT
ATCATTACCTCGACGATCGGCCAAACCGAGTTCATTCGATATTTTAACAA
CCCGAACGATACGGTGACGGGGGGTGTGGTATCCGCCTTCCAAGGAGGTG
CCATTCTCGGAACCATCATCAACATCTTCACTGGTGATCGACTGGGACGG
AAAATGTCCGTCTTTGTCGGTGCCTGCATTTCCATTGTGGGCTGCGCGCT
GCAAGGCGGAGCGATCAACATGACCATGCTCATCATCGGTCGGTTCATTG
CGGGTGTAGCTGTGGGCATGCTGACCGCCACCGTGCCCATGTACGCCGGT
GAGATGGCCGAAGCCGCATCCCGCGGAATGATGTCGGGTCTACTGCAGTG
GATGTTGAGTTGGGGGTCTTTAGTTGCGCAGTGGTTGGGATATGGATGTT
CCTTCAATAGTACCGATTTCCAATGTGCATCTCCCCCTATTATGGCTTGT
TTATGCTGCATGTGTACGAAGTGTCTAACCTATATCCACAGGGCGCTTTC
CACTTGCGTTTCAATGCGTCCCTGGTCTTGTTCTCATGACCGGTGTCTGG
TTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAAGACCGCCACGAGGA
GGCGTTGGCTACACTACACCACCTGCATGGCGACGGCACTCCGGAAAAGT
CGCAGTACATCGAGCTGGAGTATCAAGAGATCCGGGACACCATCGAGGCG
GAGCGCGCACACAACACCATTACTTGGACCTCCATCCTCACCAAACCTTC
CTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCAGGCCTTTGGCCCAT
TGTCAGGAATCAATGTCATAAACTACTATGGGACGCGCATCTACAGCTCA
TTGGGCATCGACACGCGCACCACCCTGATGATCATCGGTATCTCAGGCGG
CCTGTCGATTATCTATTGCACCATCGGGCTCTGGGCTCTGGAGCGGGTGG
GTCGGATCCGACCGCTAATCGTCTCAGCGGCGGGCATGGCAGCAGCACTG
GTTTGCAATGCAGCCATGTCCCAGCATTACAATGAAAGTAACACTAATCA
GCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAGCCTGTTCTATACAT
CGCCTGGTATCATCTCCTGGGTCTACCCTGCGGAGATCTTCCCCGTGGAT
ATTCGTAACCAAGGCAATTCCATCACCACTTTTACTAATTGGACTGTCAA
TCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTCCAACATTGGCTTCC
GTTACTTTTACGTCTTCTTCGTCTTCAACCTCATTGCTATGATCTGCTAT
ATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTCGAACAGATGGACGA
GCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCTAAAGGGGACGGATG
AGCCCCAAGTAACAATGATTGAAGACGCTATGAATGTTTCATCCTAA back to topCoding sequence (CDS) from alignment at An07:41980..43576- >CBS51388_004189-T1 ID=CBS51388_004189-T1|Name=CBS51388_004189-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4365bp|location=Sequence derived from alignment at An07:41980..43576- (Aspergillus niger CBS 513.88)
GGCGCTTTCCACTTGCGTTTCAATGCGTCCCTGGTCTTGTTCTCATGACC
GGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAAGACCG
CCACGAGGAGGCGTTGGCTACACTACACCACCTGCATGGCGACGGCACTC
CGGAAAAGTCGCAGTACATCGAGCTGGAGTATCAAGAGATCCGGGACACC
ATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCTCCATCCTCAC
CAAACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCAGGCCT
TTGGCCCATTGTCAGGAATCAATGTCATAAACTACTATGGGACGCGCATC
TACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGATCATCGGTAT
CTCAGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTCTGGGCTCTGG
AGCGGGTGGGTCGGATCCGACCGCTAATCGTCTCAGCGGCGGGCATGGCA
GCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACAATGAAAGTAA
CACTAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAGCCTGT
TCTATACATCGCCTGGTATCATCTCCTGGGTCTACCCTGCGGAGATCTTC
CCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTTTTACTAATTG
GACTGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTCCAACA
TTGGCTTCCGTTACTTTTACGTCTTCTTCGTCTTCAACCTCATTGCTATG
ATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTCGAACA
GATGGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCTAAAGG
GGACGGATGAGCCCCAAGTAACAATGATTGAAGACGCTATGAATGTTTCA
TCCTAAGCTTTCTTTTCGGATATGACAGTGGTATCATTACCTCGACGATC
GGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACGATACGGTGAC
GGGGGGTGTGGTATCCGCCTTCCAAGGAGGTGCCATTCTCGGAACCATCA
TCAACATCTTCACTGGTGATCGACTGGGACGGAAAATGTCCGTCTTTGTC
GGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCGGAGCGATCAA
CATGACCATGCTCATCATCGGTCGGTTCATTGCGGGTGTAGCTGTGGGCA
TGCTGACCGCCACCGTGCCCATGTACGCCGGTGAGATGGCCGAAGCCGCA
TCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGAGTTGGGGGTC
TTTAGTTGCGCAGTGGTTGGGATATGGATGTTCCTTCAATAGTACCGATT
TCCAATATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTGGCCAT
TGGAGGGCGCTTTCCACTTGCGTTTCAATGCGTCCCTGGTCTTGTTCTCA
TGACCGGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAA
GACCGCCACGAGGAGGCGTTGGCTACACTACACCACCTGCATGGCGACGG
CACTCCGGAAAAGTCGCAGTACATCGAGCTGGAGTATCAAGAGATCCGGG
ACACCATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCTCCATC
CTCACCAAACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCA
GGCCTTTGGCCCATTGTCAGGAATCAATGTCATAAACTACTATGGGACGC
GCATCTACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGATCATC
GGTATCTCAGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTCTGGGC
TCTGGAGCGGGTGGGTCGGATCCGACCGCTAATCGTCTCAGCGGCGGGCA
TGGCAGCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACAATGAA
AGTAACACTAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAG
CCTGTTCTATACATCGCCTGGTATCATCTCCTGGGTCTACCCTGCGGAGA
TCTTCCCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTTTTACT
AATTGGACTGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTC
CAACATTGGCTTCCGTTACTTTTACGTCTTCTTCGTCTTCAACCTCATTG
CTATGATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTC
GAACAGATGGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCT
AAAGGGGACGGATGAGCCCCAAGTAACAATGATTGAAGACGCTATGAATG
TTTCATCCTAAGCTTTCTTTTCGGATATGACAGTGGTATCATTACCTCGA
CGATCGGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACGATACG
GTGACGGGGGGTGTGGTATCCGCCTTCCAAGGAGGTGCCATTCTCGGAAC
CATCATCAACATCTTCACTGGTGATCGACTGGGACGGAAAATGTCCGTCT
TTGTCGGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCGGAGCG
ATCAACATGACCATGCTCATCATCGGTCGGTTCATTGCGGGTGTAGCTGT
GGGCATGCTGACCGCCACCGTGCCCATGTACGCCGGTGAGATGGCCGAAG
CCGCATCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGAGTTGG
GGGTCTTTAGTTGCGCAGTGGTTGGGATATGGATGTTCCTTCAATAGTAC
CGATTTCCAATATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTG
GCCATTGGAGGGCGCTTTCCACTTGCGTTTCAATGCGTCCCTGGTCTTGT
TCTCATGACCGGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGG
AACAAGACCGCCACGAGGAGGCGTTGGCTACACTACACCACCTGCATGGC
GACGGCACTCCGGAAAAGTCGCAGTACATCGAGCTGGAGTATCAAGAGAT
CCGGGACACCATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCT
CCATCCTCACCAAACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGT
GTGCAGGCCTTTGGCCCATTGTCAGGAATCAATGTCATAAACTACTATGG
GACGCGCATCTACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGA
TCATCGGTATCTCAGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTC
TGGGCTCTGGAGCGGGTGGGTCGGATCCGACCGCTAATCGTCTCAGCGGC
GGGCATGGCAGCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACA
ATGAAAGTAACACTAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTC
TTCAGCCTGTTCTATACATCGCCTGGTATCATCTCCTGGGTCTACCCTGC
GGAGATCTTCCCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTT
TTACTAATTGGACTGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCC
CTGTCCAACATTGGCTTCCGTTACTTTTACGTCTTCTTCGTCTTCAACCT
CATTGCTATGATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGA
CCCTCGAACAGATGGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGA
GACCTAAAGGGGACGGATGAGCCCCAAGTAACAATGATTGAAGACGCTAT
GAATGTTTCATCCTAAGCTTTCTTTTCGGATATGACAGTGGTATCATTAC
CTCGACGATCGGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACG
ATACGGTGACGGGGGGTGTGGTATCCGCCTTCCAAGGAGGTGCCATTCTC
GGAACCATCATCAACATCTTCACTGGTGATCGACTGGGACGGAAAATGTC
CGTCTTTGTCGGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCG
GAGCGATCAACATGACCATGCTCATCATCGGTCGGTTCATTGCGGGTGTA
GCTGTGGGCATGCTGACCGCCACCGTGCCCATGTACGCCGGTGAGATGGC
CGAAGCCGCATCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGA
GTTGGGGGTCTTTAGTTGCGCAGTGGTTGGGATATGGATGTTCCTTCAAT
AGTACCGATTTCCAATATGGCCAAACTATCAACATTACTCTCCGCTGTCT
TCTTGGCCATTGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:41980..43576 - |
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