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CBS51388_004210-T1, CBS51388_004210-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004210-T1
Unique NameCBS51388_004210-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:94116..94882-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004210-T1 ID=CBS51388_004210-T1|Name=CBS51388_004210-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=767bp|location=Sequence derived from alignment at An07:94116..94882- (Aspergillus niger CBS 513.88)
ATGACTCTCAAGCTGTACGGCTTCGTTCACTCCACCTGCACCCGTCGTGT
GCGCACCGCCCTAGCCGAGAAAGGGCTGGACGTGGAAATCGTCCCCGTCG
ACCTGGCCCAGGGCGAGCAGAAGACCTCCTCTTATCTGAACGATCTTCAG
CCGTTTGGCAAGGTGCCCGTGCTGCAGGATACTGAGACTGGCATCCAGAT
CTATGGTTGGTGTTACGAGAAATCAATTCCAGACATACCCTAACAACACT
CCTTCTATGAACAGAAAGTCGCGCCATCGCTCAATACATTGCTACCAAGT
ACCGCGGCCAGGGCACTGACTTGGCTCCTCCTGAGTCGGATCTGAAGGCC
TTTGCCTATTATCAGCAGGTACTTCTACCTTTCCCTAAAAAAAGCTACAC
AATCTCCGTACCGAAACTAATGGGATAGGCTCTCTCCATCGAGCAATCCT
ACTTCGACCCCCTCGTTTCCCAAATCGCCTACGAAAAGGTCTTCAAAGCC
CGCAAGGGTCACGGCCAGACCGACGAAGCCCGCGTGCAATCCCTCTTCTC
CCAACTGGAGCTCACCCTTGAAGGTTACGAGCGGGTCTTGTCGAAGCAGC
CCTACCTAGCCGGGCAGCAGCTTACACTGGCGGATTTGGCTCATTTGCCG
TACGGAGTCTTCATTGAGCAATTTGGATTCACGGATGTGGTGAGCAAGTT
CCCGCATGTGCAGAAGTGGTGGGAGGGATTGAAGGCTAGGGAGAGTTGGA
AGAAGGTCACGGCGTAA
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Coding sequence (CDS) from alignment at An07:94116..94882-

>CBS51388_004210-T1 ID=CBS51388_004210-T1|Name=CBS51388_004210-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1944bp|location=Sequence derived from alignment at An07:94116..94882- (Aspergillus niger CBS 513.88)
GCTCTCTCCATCGAGCAATCCTACTTCGACCCCCTCGTTTCCCAAATCGC
CTACGAAAAGGTCTTCAAAGCCCGCAAGGGTCACGGCCAGACCGACGAAG
CCCGCGTGCAATCCCTCTTCTCCCAACTGGAGCTCACCCTTGAAGGTTAC
GAGCGGGTCTTGTCGAAGCAGCCCTACCTAGCCGGGCAGCAGCTTACACT
GGCGGATTTGGCTCATTTGCCGTACGGAGTCTTCATTGAGCAATTTGGAT
TCACGGATGTGGTGAGCAAGTTCCCGCATGTGCAGAAGTGGTGGGAGGGA
TTGAAGGCTAGGGAGAGTTGGAAGAAGGTCACGGCGTAAAAAGTCGCGCC
ATCGCTCAATACATTGCTACCAAGTACCGCGGCCAGGGCACTGACTTGGC
TCCTCCTGAGTCGGATCTGAAGGCCTTTGCCTATTATCAGCAGATGACTC
TCAAGCTGTACGGCTTCGTTCACTCCACCTGCACCCGTCGTGTGCGCACC
GCCCTAGCCGAGAAAGGGCTGGACGTGGAAATCGTCCCCGTCGACCTGGC
CCAGGGCGAGCAGAAGACCTCCTCTTATCTGAACGATCTTCAGCCGTTTG
GCAAGGTGCCCGTGCTGCAGGATACTGAGACTGGCATCCAGATCTATGGC
TCTCTCCATCGAGCAATCCTACTTCGACCCCCTCGTTTCCCAAATCGCCT
ACGAAAAGGTCTTCAAAGCCCGCAAGGGTCACGGCCAGACCGACGAAGCC
CGCGTGCAATCCCTCTTCTCCCAACTGGAGCTCACCCTTGAAGGTTACGA
GCGGGTCTTGTCGAAGCAGCCCTACCTAGCCGGGCAGCAGCTTACACTGG
CGGATTTGGCTCATTTGCCGTACGGAGTCTTCATTGAGCAATTTGGATTC
ACGGATGTGGTGAGCAAGTTCCCGCATGTGCAGAAGTGGTGGGAGGGATT
GAAGGCTAGGGAGAGTTGGAAGAAGGTCACGGCGTAAAAAGTCGCGCCAT
CGCTCAATACATTGCTACCAAGTACCGCGGCCAGGGCACTGACTTGGCTC
CTCCTGAGTCGGATCTGAAGGCCTTTGCCTATTATCAGCAGATGACTCTC
AAGCTGTACGGCTTCGTTCACTCCACCTGCACCCGTCGTGTGCGCACCGC
CCTAGCCGAGAAAGGGCTGGACGTGGAAATCGTCCCCGTCGACCTGGCCC
AGGGCGAGCAGAAGACCTCCTCTTATCTGAACGATCTTCAGCCGTTTGGC
AAGGTGCCCGTGCTGCAGGATACTGAGACTGGCATCCAGATCTATGGCTC
TCTCCATCGAGCAATCCTACTTCGACCCCCTCGTTTCCCAAATCGCCTAC
GAAAAGGTCTTCAAAGCCCGCAAGGGTCACGGCCAGACCGACGAAGCCCG
CGTGCAATCCCTCTTCTCCCAACTGGAGCTCACCCTTGAAGGTTACGAGC
GGGTCTTGTCGAAGCAGCCCTACCTAGCCGGGCAGCAGCTTACACTGGCG
GATTTGGCTCATTTGCCGTACGGAGTCTTCATTGAGCAATTTGGATTCAC
GGATGTGGTGAGCAAGTTCCCGCATGTGCAGAAGTGGTGGGAGGGATTGA
AGGCTAGGGAGAGTTGGAAGAAGGTCACGGCGTAAAAAGTCGCGCCATCG
CTCAATACATTGCTACCAAGTACCGCGGCCAGGGCACTGACTTGGCTCCT
CCTGAGTCGGATCTGAAGGCCTTTGCCTATTATCAGCAGATGACTCTCAA
GCTGTACGGCTTCGTTCACTCCACCTGCACCCGTCGTGTGCGCACCGCCC
TAGCCGAGAAAGGGCTGGACGTGGAAATCGTCCCCGTCGACCTGGCCCAG
GGCGAGCAGAAGACCTCCTCTTATCTGAACGATCTTCAGCCGTTTGGCAA
GGTGCCCGTGCTGCAGGATACTGAGACTGGCATCCAGATCTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004210CBS51388_004210Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004210-T1CBS51388_004210-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004210-T1.cdsCBS51388_004210-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004210-T1.exon3CBS51388_004210-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004210-T1.exon2CBS51388_004210-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004210-T1.exon1CBS51388_004210-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR036249
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:94116..94882 -
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