You are here

CBS51388_004352-T1, CBS51388_004352-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004352-T1
Unique NameCBS51388_004352-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:483032..483632-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004352-T1 ID=CBS51388_004352-T1|Name=CBS51388_004352-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=601bp|location=Sequence derived from alignment at An07:483032..483632- (Aspergillus niger CBS 513.88)
ATGCCTGGTAAGTACTACCTCAGAAGATCCCACATCATCTAATACTTATC AACCCGTACTTACTGTCTCCTTTTTAGCCAACGAAGTGAGTACACTCCCA AATGCCTCGTATCCATATTCCCCTCACTTCCAGTCATTGACGGCGGTAAT TATTCGAGTATATAACATCACTCACTATCCTTCATCCTTCTCACCGCAGT ATTTCTCACTTGTCATATACTTGCCCCTGATGCTGACCGATATTCATTGT AGGAGCAGCAGCAGCAGCAGCAGCAACAGACCGGGCCGGGGCCCGCCGAA ATCGTTAGTACATGATATTATGTCTTCCATAATGATATGTTCTAATGATA TACACATAGACCCGGAGGAGGCCGCCGCCAAGGCGAAGAGGCGACGGGAG CTGATGGAGCAGTTTTTTCGCCTGGAAGATGATTATATACGTCACCACCT CGACCTCGAGGAAAGAGAGGTGTATTGGAGGGAGAGGGAGGAGAAGCTGA AGAAGGAGCTGGAGGCCACTCAGGCATACCTCCGCCATATTCAAGAGGAG CTGGGGGAGTTGGAGGGGGTTACCGACGAGGACGAGGATGAAGACAACTA A
back to top

Coding sequence (CDS) from alignment at An07:483032..483632-

>CBS51388_004352-T1 ID=CBS51388_004352-T1|Name=CBS51388_004352-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1248bp|location=Sequence derived from alignment at An07:483032..483632- (Aspergillus niger CBS 513.88)
ACCCGGAGGAGGCCGCCGCCAAGGCGAAGAGGCGACGGGAGCTGATGGAG
CAGTTTTTTCGCCTGGAAGATGATTATATACGTCACCACCTCGACCTCGA
GGAAAGAGAGGTGTATTGGAGGGAGAGGGAGGAGAAGCTGAAGAAGGAGC
TGGAGGCCACTCAGGCATACCTCCGCCATATTCAAGAGGAGCTGGGGGAG
TTGGAGGGGGTTACCGACGAGGACGAGGATGAAGACAACTAAGAGCAGCA
GCAGCAGCAGCAGCAACAGACCGGGCCGGGGCCCGCCGAAATCGTTACCA
ACGAAATGCCTGACCCGGAGGAGGCCGCCGCCAAGGCGAAGAGGCGACGG
GAGCTGATGGAGCAGTTTTTTCGCCTGGAAGATGATTATATACGTCACCA
CCTCGACCTCGAGGAAAGAGAGGTGTATTGGAGGGAGAGGGAGGAGAAGC
TGAAGAAGGAGCTGGAGGCCACTCAGGCATACCTCCGCCATATTCAAGAG
GAGCTGGGGGAGTTGGAGGGGGTTACCGACGAGGACGAGGATGAAGACAA
CTAAGAGCAGCAGCAGCAGCAGCAGCAACAGACCGGGCCGGGGCCCGCCG
AAATCGTTACCAACGAAATGCCTGACCCGGAGGAGGCCGCCGCCAAGGCG
AAGAGGCGACGGGAGCTGATGGAGCAGTTTTTTCGCCTGGAAGATGATTA
TATACGTCACCACCTCGACCTCGAGGAAAGAGAGGTGTATTGGAGGGAGA
GGGAGGAGAAGCTGAAGAAGGAGCTGGAGGCCACTCAGGCATACCTCCGC
CATATTCAAGAGGAGCTGGGGGAGTTGGAGGGGGTTACCGACGAGGACGA
GGATGAAGACAACTAAGAGCAGCAGCAGCAGCAGCAGCAACAGACCGGGC
CGGGGCCCGCCGAAATCGTTACCAACGAAATGCCTGACCCGGAGGAGGCC
GCCGCCAAGGCGAAGAGGCGACGGGAGCTGATGGAGCAGTTTTTTCGCCT
GGAAGATGATTATATACGTCACCACCTCGACCTCGAGGAAAGAGAGGTGT
ATTGGAGGGAGAGGGAGGAGAAGCTGAAGAAGGAGCTGGAGGCCACTCAG
GCATACCTCCGCCATATTCAAGAGGAGCTGGGGGAGTTGGAGGGGGTTAC
CGACGAGGACGAGGATGAAGACAACTAAGAGCAGCAGCAGCAGCAGCAGC
AACAGACCGGGCCGGGGCCCGCCGAAATCGTTACCAACGAAATGCCTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004352CBS51388_004352Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004352-T1CBS51388_004352-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004352-T1.cdsCBS51388_004352-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004352-T1.exon4CBS51388_004352-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_004352-T1.exon3CBS51388_004352-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004352-T1.exon2CBS51388_004352-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004352-T1.exon1CBS51388_004352-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:483032..483632 -