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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:564976..565811+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004376-T1 ID=CBS51388_004376-T1|Name=CBS51388_004376-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=836bp|location=Sequence derived from alignment at An07:564976..565811+ (Aspergillus niger CBS 513.88)
ATGTATACTGGACAAAAGATGACGATGGCACCTGGTATGGCTTCTACTAC
AGATAGTAAATCTCTACATAGCATACAACTAATATATGCGTACCAGTCAA
TATCCCCAGTCAAGTCCCATTGGAGATCCTGCTCCTCCTCTTCGGTCTCT
GCAGACCAATCGAGCAATACATGCTCCTCTTCTCAGCCCCCGAGCTCATC
CATCGACTTTCCTCCAAGCATCTCATGACACGAGAAGCCAACGGCGACAC
TCTCCTGCACATTCTCGCTAAAGACCAAGGTCCATCGCGACAACTGGCGC
GGGCTCTGTTCTCCAGGAAGGACCTGGACGTCAACGTGCAGAACAACAAC
TGGAAGATCCCCTTAGTATGTGCCGCGCAATACGGGAATCACTGGCTCGT
CAAACTACTGCTCGAGCGGGGCGATTTCAACAGCTACATGCTGGACTACT
TCTACTTCACGCCGCTGGTGTGGGCAGCCAAGAAGCAGGACGAGGGGTTA
GTGAAGATTTTGCTGGCGAACAGGAATGTTCGGCCAAATGAAGTGGACAT
TTTCCGGCGAACGGCACTGTCATATGCAGCGGAATATCGAAATGAGGCGA
TTGTGCGGTTGTTGCTCGCGGATGAGGATGTTGATGCGGAGTGGAGTGAT
GAGACGGCGCGATCACCGCTGTCTTATGCGGCAGAGGCTGGGAGTAAGAG
AATAGTGGAGTTGCTGTTGGATCGCGAGGAGGTGAATGCACATTCGGTGG
ATTCGTTTATGAAGACGCCGTTTGTGTGGGCAGCGGATTATGGACATTTG
GAGATTATGGTGAGATTGGAGGAGTGTGAGTATTAG back to topCoding sequence (CDS) from alignment at An07:564976..565811+ >CBS51388_004376-T1 ID=CBS51388_004376-T1|Name=CBS51388_004376-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1548bp|location=Sequence derived from alignment at An07:564976..565811+ (Aspergillus niger CBS 513.88)
ATGTATACTGGACAAAAGATGACGATGGCACCTGTCAATATCCCCAGTCA
AGTCCCATTGGAGATCCTGCTCCTCCTCTTCGGTCTCTGCAGACCAATCG
AGCAATACATGCTCCTCTTCTCAGCCCCCGAGCTCATCCATCGACTTTCC
TCCAAGCATCTCATGACACGAGAAGCCAACGGCGACACTCTCCTGCACAT
TCTCGCTAAAGACCAAGGTCCATCGCGACAACTGGCGCGGGCTCTGTTCT
CCAGGAAGGACCTGGACGTCAACGTGCAGAACAACAACTGGAAGATCCCC
TTAGTATGTGCCGCGCAATACGGGAATCACTGGCTCGTCAAACTACTGCT
CGAGCGGGGCGATTTCAACAGCTACATGCTGGACTACTTCTACTTCACGC
CGCTGGTGTGGGCAGCCAAGAAGCAGGACGAGGGGTTAGTGAAGATTTTG
CTGGCGAACAGGAATGTTCGGCCAAATGAAGTGGACATTTTCCGGCGAAC
GGCACTGTCATATGCAGCGGAATATCGAAATGAGGCGATTGTGCGGTTGT
TGCTCGCGGATGAGGATGTTGATGCGGAGTGGAGTGATGAGACGGCGCGA
TCACCGCTGTCTTATGCGGCAGAGGCTGGGAGTAAGAGAATAGTGGAGTT
GCTGTTGGATCGCGAGGAGGTGAATGCACATTCGGTGGATTCGTTTATGA
AGACGCCGTTTGTGTGGGCAGCGGATTATGGACATTTGGAGATTATGGTG
AGATTGGAGGAGTGTGAGTATTAGATGTATACTGGACAAAAGATGACGAT
GGCACCTGTCAATATCCCCAGTCAAGTCCCATTGGAGATCCTGCTCCTCC
TCTTCGGTCTCTGCAGACCAATCGAGCAATACATGCTCCTCTTCTCAGCC
CCCGAGCTCATCCATCGACTTTCCTCCAAGCATCTCATGACACGAGAAGC
CAACGGCGACACTCTCCTGCACATTCTCGCTAAAGACCAAGGTCCATCGC
GACAACTGGCGCGGGCTCTGTTCTCCAGGAAGGACCTGGACGTCAACGTG
CAGAACAACAACTGGAAGATCCCCTTAGTATGTGCCGCGCAATACGGGAA
TCACTGGCTCGTCAAACTACTGCTCGAGCGGGGCGATTTCAACAGCTACA
TGCTGGACTACTTCTACTTCACGCCGCTGGTGTGGGCAGCCAAGAAGCAG
GACGAGGGGTTAGTGAAGATTTTGCTGGCGAACAGGAATGTTCGGCCAAA
TGAAGTGGACATTTTCCGGCGAACGGCACTGTCATATGCAGCGGAATATC
GAAATGAGGCGATTGTGCGGTTGTTGCTCGCGGATGAGGATGTTGATGCG
GAGTGGAGTGATGAGACGGCGCGATCACCGCTGTCTTATGCGGCAGAGGC
TGGGAGTAAGAGAATAGTGGAGTTGCTGTTGGATCGCGAGGAGGTGAATG
CACATTCGGTGGATTCGTTTATGAAGACGCCGTTTGTGTGGGCAGCGGAT
TATGGACATTTGGAGATTATGGTGAGATTGGAGGAGTGTGAGTATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:564976..565811 + |
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