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CBS51388_004390-T1, CBS51388_004390-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004390-T1
Unique NameCBS51388_004390-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:618374..619547-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004390-T1 ID=CBS51388_004390-T1|Name=CBS51388_004390-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1174bp|location=Sequence derived from alignment at An07:618374..619547- (Aspergillus niger CBS 513.88)
ATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGGTATGTCAAC
CGGTTATCTTGCCTCGCCAGCCCAGCTGATTTCCCCGGTAACATCATCAC
AACAATGCTGACTCGCTGCTCAGACGAGCCCCGTTTCGCTCGCGACCGCA
GCGCATCTCCTCGCGATGAGCCTCGTGCTGATCGCACCCGTAGCCGTTCT
CCCAACGGTCGCGTCGATGACCGGTATGTTTACGTGCAGATCTAGCTAGC
TAGCTAGCCAACCCCCAGACGTCAGCCAGACTGACTGGAGCTCCTCATAA
CTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGTGCT
ATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCTGAC
CGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAAACT
GCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGCTTC
GTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCTCCA
GGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTCGTA
GCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAGCGT
GGTTAGTTATCCAGACTCCCTCTGTATATTGATATGTGGCTTACGCGTGT
CCAATATCGTCAGATTTCCGTGGAGGTCACCGTGGCGGCCGTGGCGATCG
CTATGACGATCGTCGTGGTCCTTATGGTGGTAGCTGGCGCCGTGGCGACG
ACTACCGCTATGGCCGTTATGACTCCTACAGCGACCGCCGCGACTATGGT
CGTGACTACCGTGACTACGGTGGCCGCCGTGACTACCGTGATGACTATGG
ATACCGCGGTGGTGGCAGCAGCGGTGGCATTGATCGCTATGCTTCCGGTG
GCCGCGAGGACCGTTACAGCCGCGAGGACCGTCGTGACGATCGCCGTGAA
GAGCGTCGTGGCGGCAGCGGTGGTGGCTACTATGACCGCGATGCTAACCC
GCCCAGCTACGGCTCCGCAGCTCCTGCTCGTGATGCCTACGCCGGCGGCG
GTGGCAGCAGCGGTGGCGGCGGCGGCGGCGGCCGTTCCTATGATCCCCGT
GACGACCGTTACAGCACTAGGTAG
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Coding sequence (CDS) from alignment at An07:618374..619547-

>CBS51388_004390-T1 ID=CBS51388_004390-T1|Name=CBS51388_004390-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3792bp|location=Sequence derived from alignment at An07:618374..619547- (Aspergillus niger CBS 513.88)
ATTTCCGTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGT
CGTGGTCCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGG
CCGTTATGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTG
ACTACGGTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGT
GGCAGCAGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCG
TTACAGCCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCG
GCAGCGGTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGC
TCCGCAGCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGG
TGGCGGCGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACA
GCACTAGGTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGA
GGGTGCTATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCC
GTCTGACCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTC
GAAAACTGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATT
CGGCTTCGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGG
GTCTCCAGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCT
CGTCGTAGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCC
CAAGCGTGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCG
ATGAGCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTC
GATGACCGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGAT
TTCCGTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGTCG
TGGTCCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGGCC
GTTATGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTGAC
TACGGTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGTGG
CAGCAGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCGTT
ACAGCCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCGGC
AGCGGTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGCTC
CGCAGCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGGTG
GCGGCGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACAGC
ACTAGGTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGG
GTGCTATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGT
CTGACCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGA
AAACTGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCG
GCTTCGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGT
CTCCAGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCG
TCGTAGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCA
AGCGTGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGAT
GAGCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGA
TGACCGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGATTT
CCGTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGTCGTG
GTCCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGGCCGT
TATGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTGACTA
CGGTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGTGGCA
GCAGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCGTTAC
AGCCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCGGCAG
CGGTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGCTCCG
CAGCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGGTGGC
GGCGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACAGCAC
TAGGTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGT
GCTATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCT
GACCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAA
ACTGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGC
TTCGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCT
CCAGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTC
GTAGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAG
CGTGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGATGA
GCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGATG
ACCGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGATTTCC
GTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGTCGTGGT
CCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGGCCGTTA
TGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTGACTACG
GTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGTGGCAGC
AGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCGTTACAG
CCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCGGCAGCG
GTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGCTCCGCA
GCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGGTGGCGG
CGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACAGCACTA
GGTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGTGC
TATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCTGA
CCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAAAC
TGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGCTT
CGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCTCC
AGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTCGT
AGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAGCG
TGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGATGAGC
CTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGATGAC
CGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004390CBS51388_004390Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004390-T1CBS51388_004390-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004390-T1.cdsCBS51388_004390-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004390-T1.exon4CBS51388_004390-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_004390-T1.exon3CBS51388_004390-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004390-T1.exon2CBS51388_004390-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004390-T1.exon1CBS51388_004390-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:618374..619547 -
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