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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:658227..659475+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004402-T1 ID=CBS51388_004402-T1|Name=CBS51388_004402-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1249bp|location=Sequence derived from alignment at An07:658227..659475+ (Aspergillus niger CBS 513.88)
ATGACCACCCAATCCAGAGACCACGGTGGCCACCATGGCCACCACCACCA
TCATCACCATCACGGAAACGTTTACCTTACTTCTACCGATAAACATGATG
CCGGTGTGCGAATTACGCGACTTGGCCTGCTCGCTAACCTCGCCATGGCC
ATCGGGAAGTTCATCGGCGGCTACGTGTTCCATTCCCAAGCCCTCATCGC
CGACGCCTACCACGCCCTTACCGATCTAGTTTCCGATTTCCTGACATTAG
GCACGGTCGCCTGGTCGCTCAAGCCGCCGAGCGAGCGATTTCCTAATGGT
TACGGCAAGATCGAAAGCATCGGAGCATTAGGGGTTAGCGGGTTGTTGCT
CTGCGGAGGTGTGTTCATGGGCCTCAATTCCGGCCAAGTTCTGCTGGACC
AGTTCTATCCCCAGGCCGCGGAAGCGATCGCGCATGTAGGCGCCCTGGGA
CATGGTCACTCGCATAGCCATGGCGTTGAGGCAATGGGCCCGAGCATTCA
TGCCGCATGGCTTGCTGCGGGGTCCATCGTGGTGAAGGAGTGGTTATATC
ATGCTAGTGAGTACCTTGAGGAATCTCTGCCCTAACACCAACTGCGAATG
CTGACTGCGCCTTTCCCCGACAGCCATGAAAGTCGCGACGGAACGCAAGT
CGTCAGTACTAGCCTCCAACGCCATCCACCACCGTATCGACTCCCTGACC
AGTATTGTCGCTCTCTTTACAATTGGCGGAACCTATCTCTTCCAGGACGC
ATCCTGGCTGGACCCTGTGGGTGGACTGTTGATTTCGCTGATGGTCATCA
AGGCCGGATGGGGAAACACCAAGACCTCGTTGTTGGAGCTCGCCGATACG
AACGTTGACGACGACATCAAGGAATCGGTACAGAAAGCCGCGGCTAAGAT
GCTGGCGAAACTGGAAGGTGGCGATGCCATCAAGGTCCGTGATGTGCAGG
GCATGAAGTCGGGACAAAATTATCTGATGGATGTCGAAATCGCTGTGCCG
GGCGCGTGGTCTGTCAGCCGGACCCGGCAGGTCGAGGAGTCCATTCGCAC
TGCGGTCGGAGAAGGCGTGCGTGGAGTCAAGCGTCTCAAGGTTCGGTTTA
TCCCCTTGGAGCACGAGGAGTTGACTTTCACGGAGGAGTTCATCCCTGCG
GATGTCACTTCCCGTGCGCGTCCTGAGCCGGAGGATGGCGAAGAGGATGA
GCATGACCATGACCATGACCATGAACATGAACCCCGCAAAACCCACTGA back to topCoding sequence (CDS) from alignment at An07:658227..659475+ >CBS51388_004402-T1 ID=CBS51388_004402-T1|Name=CBS51388_004402-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2364bp|location=Sequence derived from alignment at An07:658227..659475+ (Aspergillus niger CBS 513.88)
ATGACCACCCAATCCAGAGACCACGGTGGCCACCATGGCCACCACCACCA
TCATCACCATCACGGAAACGTTTACCTTACTTCTACCGATAAACATGATG
CCGGTGTGCGAATTACGCGACTTGGCCTGCTCGCTAACCTCGCCATGGCC
ATCGGGAAGTTCATCGGCGGCTACGTGTTCCATTCCCAAGCCCTCATCGC
CGACGCCTACCACGCCCTTACCGATCTAGTTTCCGATTTCCTGACATTAG
GCACGGTCGCCTGGTCGCTCAAGCCGCCGAGCGAGCGATTTCCTAATGGT
TACGGCAAGATCGAAAGCATCGGAGCATTAGGGGTTAGCGGGTTGTTGCT
CTGCGGAGGTGTGTTCATGGGCCTCAATTCCGGCCAAGTTCTGCTGGACC
AGTTCTATCCCCAGGCCGCGGAAGCGATCGCGCATGTAGGCGCCCTGGGA
CATGGTCACTCGCATAGCCATGGCGTTGAGGCAATGGGCCCGAGCATTCA
TGCCGCATGGCTTGCTGCGGGGTCCATCGTGGTGAAGGAGTGGTTATATC
ATGCTACCATGAAAGTCGCGACGGAACGCAAGTCGTCAGTACTAGCCTCC
AACGCCATCCACCACCGTATCGACTCCCTGACCAGTATTGTCGCTCTCTT
TACAATTGGCGGAACCTATCTCTTCCAGGACGCATCCTGGCTGGACCCTG
TGGGTGGACTGTTGATTTCGCTGATGGTCATCAAGGCCGGATGGGGAAAC
ACCAAGACCTCGTTGTTGGAGCTCGCCGATACGAACGTTGACGACGACAT
CAAGGAATCGGTACAGAAAGCCGCGGCTAAGATGCTGGCGAAACTGGAAG
GTGGCGATGCCATCAAGGTCCGTGATGTGCAGGGCATGAAGTCGGGACAA
AATTATCTGATGGATGTCGAAATCGCTGTGCCGGGCGCGTGGTCTGTCAG
CCGGACCCGGCAGGTCGAGGAGTCCATTCGCACTGCGGTCGGAGAAGGCG
TGCGTGGAGTCAAGCGTCTCAAGGTTCGGTTTATCCCCTTGGAGCACGAG
GAGTTGACTTTCACGGAGGAGTTCATCCCTGCGGATGTCACTTCCCGTGC
GCGTCCTGAGCCGGAGGATGGCGAAGAGGATGAGCATGACCATGACCATG
ACCATGAACATGAACCCCGCAAAACCCACTGAATGACCACCCAATCCAGA
GACCACGGTGGCCACCATGGCCACCACCACCATCATCACCATCACGGAAA
CGTTTACCTTACTTCTACCGATAAACATGATGCCGGTGTGCGAATTACGC
GACTTGGCCTGCTCGCTAACCTCGCCATGGCCATCGGGAAGTTCATCGGC
GGCTACGTGTTCCATTCCCAAGCCCTCATCGCCGACGCCTACCACGCCCT
TACCGATCTAGTTTCCGATTTCCTGACATTAGGCACGGTCGCCTGGTCGC
TCAAGCCGCCGAGCGAGCGATTTCCTAATGGTTACGGCAAGATCGAAAGC
ATCGGAGCATTAGGGGTTAGCGGGTTGTTGCTCTGCGGAGGTGTGTTCAT
GGGCCTCAATTCCGGCCAAGTTCTGCTGGACCAGTTCTATCCCCAGGCCG
CGGAAGCGATCGCGCATGTAGGCGCCCTGGGACATGGTCACTCGCATAGC
CATGGCGTTGAGGCAATGGGCCCGAGCATTCATGCCGCATGGCTTGCTGC
GGGGTCCATCGTGGTGAAGGAGTGGTTATATCATGCTACCATGAAAGTCG
CGACGGAACGCAAGTCGTCAGTACTAGCCTCCAACGCCATCCACCACCGT
ATCGACTCCCTGACCAGTATTGTCGCTCTCTTTACAATTGGCGGAACCTA
TCTCTTCCAGGACGCATCCTGGCTGGACCCTGTGGGTGGACTGTTGATTT
CGCTGATGGTCATCAAGGCCGGATGGGGAAACACCAAGACCTCGTTGTTG
GAGCTCGCCGATACGAACGTTGACGACGACATCAAGGAATCGGTACAGAA
AGCCGCGGCTAAGATGCTGGCGAAACTGGAAGGTGGCGATGCCATCAAGG
TCCGTGATGTGCAGGGCATGAAGTCGGGACAAAATTATCTGATGGATGTC
GAAATCGCTGTGCCGGGCGCGTGGTCTGTCAGCCGGACCCGGCAGGTCGA
GGAGTCCATTCGCACTGCGGTCGGAGAAGGCGTGCGTGGAGTCAAGCGTC
TCAAGGTTCGGTTTATCCCCTTGGAGCACGAGGAGTTGACTTTCACGGAG
GAGTTCATCCCTGCGGATGTCACTTCCCGTGCGCGTCCTGAGCCGGAGGA
TGGCGAAGAGGATGAGCATGACCATGACCATGACCATGAACATGAACCCC
GCAAAACCCACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008324 | cation transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006812 | cation transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002524 |
| DBxref | InterPro:IPR027469 |
| DBxref | PFAM:PF01545 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:658227..659475 + |
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