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CBS51388_004406-T1, CBS51388_004406-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004406-T1
Unique NameCBS51388_004406-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:670840..671601+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004406-T1 ID=CBS51388_004406-T1|Name=CBS51388_004406-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=762bp|location=Sequence derived from alignment at An07:670840..671601+ (Aspergillus niger CBS 513.88)
ATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTGCGGCGGCGTACGTACTC
ACTTCATCCTCTTCAGCTAATCGCGCGACACTGACTTCAATGTTGCAGTT
GCCGTCCAGCAGCCCTACGCTCTGCGTTGGTCTTTGATGAACTCGGTTTC
TCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGGTAAGCTACTA
CGCGTGATTGGGATTCTTATTTGCGACTATTTCGACTTGGGAGGGGTTCG
CGATATCGAACTCGACGTCATGAAGCGAATGTCGCTAAGTGGAGGCGGAA
CACGGATTGCTAACGTTGTCATGCAGACATGCTGCCACCTCCTCCAACTC
CTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCCCGTCT
CTCCCCACCTTAGCATCTACCGTCCCCAGATCACATGGATCGGCAGTAGT
ATCCACCGTATCACCGGTATTGCGCTGTCCGGAAGTCTCTACCTCTATGC
CAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTCTGCCT
CCGCCGCTGCCGCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTGCCCTG
AAGACTACCATGGCCCTGCCTTTCACCTACCACTGCATGAACGGCGTGCG
CCACCTGATTTGGGATACTGGTGCTGGTCTTACCAACCCCCAGGTCATCA
AGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTATTCTT
GCTTTCCTGTGA
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Coding sequence (CDS) from alignment at An07:670840..671601+

>CBS51388_004406-T1 ID=CBS51388_004406-T1|Name=CBS51388_004406-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1701bp|location=Sequence derived from alignment at An07:670840..671601+ (Aspergillus niger CBS 513.88)
ATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTGCGGCGGCTTGCCGTCCA
GCAGCCCTACGCTCTGCGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTG
CCGTTGCTCTTGGAAGAACCGTTCAGACTAGACATGCTGCCACCTCCTCC
AACTCCTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCC
CGTCTCTCCCCACCTTAGCATCTACCGTCCCCAGATCACATGGATCGGCA
GTAGTATCCACCGTATCACCGGTATTGCGCTGTCCGGAAGTCTCTACCTC
TATGCCAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTC
TGCCTCCGCCGCTGCCGCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTG
CCCTGAAGACTACCATGGCCCTGCCTTTCACCTACCACTGCATGAACGGC
GTGCGCCACCTGATTTGGGATACTGGTGCTGGTCTTACCAACCCCCAGGT
CATCAAGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTA
TTCTTGCTTTCCTGTGAATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTG
CGGCGGCTTGCCGTCCAGCAGCCCTACGCTCTGCGTTGGTCTTTGATGAA
CTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGAC
ATGCTGCCACCTCCTCCAACTCCTCCGACCCTACCAAGCTCCTCGCCCAG
CAGCGTCTCAACCGCCCCGTCTCTCCCCACCTTAGCATCTACCGTCCCCA
GATCACATGGATCGGCAGTAGTATCCACCGTATCACCGGTATTGCGCTGT
CCGGAAGTCTCTACCTCTATGCCAGTGCCTACCTCGCCTCTCCCATGCTC
GGCTGGGATCTGGGCTCTGCCTCCGCCGCTGCCGCTTTCGCCGCTCTCCC
TGTTGTCGCCAAGGTTGCCCTGAAGACTACCATGGCCCTGCCTTTCACCT
ACCACTGCATGAACGGCGTGCGCCACCTGATTTGGGATACTGGTGCTGGT
CTTACCAACCCCCAGGTCATCAAGTCCGGCTGGACTGTGGTGGGTTTGAG
TACTCTTAGCGCTCTTATTCTTGCTTTCCTGTGAATGCTCTCTCAGAAGG
TTGCTCAGCAATCGTTGCGGCGGCTTGCCGTCCAGCAGCCCTACGCTCTG
CGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAG
AACCGTTCAGACTAGACATGCTGCCACCTCCTCCAACTCCTCCGACCCTA
CCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCCCGTCTCTCCCCACCTT
AGCATCTACCGTCCCCAGATCACATGGATCGGCAGTAGTATCCACCGTAT
CACCGGTATTGCGCTGTCCGGAAGTCTCTACCTCTATGCCAGTGCCTACC
TCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTCTGCCTCCGCCGCTGCC
GCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTGCCCTGAAGACTACCAT
GGCCCTGCCTTTCACCTACCACTGCATGAACGGCGTGCGCCACCTGATTT
GGGATACTGGTGCTGGTCTTACCAACCCCCAGGTCATCAAGTCCGGCTGG
ACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTATTCTTGCTTTCCTGTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0045281succinate dehydrogenase complex
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0000104succinate dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004406CBS51388_004406Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004406-T1.exon1CBS51388_004406-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004406-T1.exon2CBS51388_004406-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004406-T1.exon3CBS51388_004406-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004406-T1.cdsCBS51388_004406-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004406-T1CBS51388_004406-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018495
DBxrefInterPro:IPR034804
DBxrefInterPro:IPR014314
DBxrefInterPro:IPR000701
DBxrefPFAM:PF01127
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:670840..671601 +
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