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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:677443..679285+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004408-T1 ID=CBS51388_004408-T1|Name=CBS51388_004408-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1843bp|location=Sequence derived from alignment at An07:677443..679285+ (Aspergillus niger CBS 513.88)
ATGGCGTCGGCCATCTTCTTCCTCGATCTCAAGGGCAAGGTATGAACCCC
CGTGGAGGTTGCGCTGTCATGAACAATTCCGCCGTGATCCCCTGGAACCT
GACCGTTTATTTAGACCCTTCTAGCCCGAAACTACCGCGGAGACATCCCC
ATGTCCGCCGTCGAAAAATTCCCCATCCTACTCAGTGACGCCGAAGAAGA
GAGCTCCGCCGTGGCTCCGTGCTTTTCCCACGAAGGAATTAACGTACGTA
TTTGTGTCTCCGACTCGTGGCTGCGGCGGCGCACCTGCACCTCCCCCCGC
CGTTCCCCGCAACCCGCTGTGTCTACCATCTCCCACATCAGCCCTGCGCG
CATACCCAGAAAGGAACCCAGAAGCATGGAGGTCAATTGCTGAGAATTCC
GCCTTTCCTAGTACCTCTACATCCGTCACAGCAACCTTTACATTCTTGCC
CTGACTAAGAAGAACACCAATGCCACCGAGATCCTCCTTTTCCTGCATAA
GATCGTGGAGGTGTTCACGGAATACTTCAAGGTACTGGAGGAGGAGAGTA
TCCGCGATAACTTTGTCATCATCTATGAATTGCTCGATGAGATGATGGAC
TTTGGATACCCGCAGACGACGGAGAGCAAGATATTGCAAGAGTAAGACGG
ACCCGTCTTTGAGACTACGAGTAATGGAGGACCACAGCTGACGATTCCAT
GGCAGATACATTACCCAAGAATCACACAAGCTGGAGATCCAAGCCCGACC
ACCCATTGCTGTCACCAATGCCGTGTCATGGCGAAGTGAGGGTATCCGGT
ACCGCAAGAACGAAGTCTTCCTTGATGTTGTGGAGTCCCTTAACCTCCTC
GTGTCCGCGTCTGGTAACGTGTTGCGATCGGAGATTCTCGGAGCTATCAA
GATGAAGTGTTATCTGAGTGGTATGCCGGAGCTTCGTCTGGGCTTGAACG
ACAAGGTCATGTTCGAAACCACGGGTCGCGCAACAAGAGGAAAGGCCGTC
GAGATGGAGGACGTCAAGTTCCATCAGTGTGTCCGACTTTCTCGGTTCGA
GAATGACCGCACCATCAGCTTCATTCCCCCGGATGGCGAGTTCGAGCTGA
TGAGCTACCGGTTGAACACCCAAGTCAAGCCTCTGATTTGGGTGGAATGT
CTGGTGGAGTCGCACTCTGGTTCGCGCATGGAGTATATGTTGAAGGTGCG
GCCCAGCTCCCTGCCTATAATACTAGAGAGACATATCACCAAGCTAACGT
CACTCCTCCCAAACAGGCCAAGGCCCAATTCAAGCGCCGCAGCACTGCCA
ACAACGTAGAAATCCTCGTCCCAGTCCCAGAAGATGCCGACTCACCCCGT
TTCCGCACCAACATCGGAACCGTGCACTACGCGCCTGAGAAATCCGCCAT
CATCTGGAAGATCAAGCAGTTCGGCGGAGGCAAGGAGTTCCTCATGCGCG
CAGAGCTGGGTCTGCCGTCCGTAAAGGGCGACGACGAGCACGGCGGTGGC
ATGACCGGCGGTTTCGGAGGTAGCATGGGTGGAACTGGGCAGGGCAAGGC
AAAGCGGCCGATCAACGTCAAATTCGAAATCCCTTACTTCACTACTAGCG
GTATCCAAGTCCGGTACTTGAAGATCACGGAACCTAAGGTATGTCCATAA
ATCCATGTCAACTCCCTTCCCTTCAACAACCCACCATCAGTTGGATTGGA
AGCCTTGTCGCACAAGCACAATGCAATGCAATGGATGCTAACGAATGACC
CAATGAATGCAGCTACAATACCCCTCCCTCCCATGGGTGCGATATATAAC
ACAATCAGGCGACATTGCTGTCCGCATGCCAGATGTACAATGA back to topCoding sequence (CDS) from alignment at An07:677443..679285+ >CBS51388_004408-T1 ID=CBS51388_004408-T1|Name=CBS51388_004408-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8046bp|location=Sequence derived from alignment at An07:677443..679285+ (Aspergillus niger CBS 513.88)
ATGGCGTCGGCCATCTTCTTCCTCGATCTCAAGGGCAAGACCCTTCTAGC
CCGAAACTACCGCGGAGACATCCCCATGTCCGCCGTCGAAAAATTCCCCA
TCCTACTCAGTGACGCCGAAGAAGAGAGCTCCGCCGTGGCTCCGTGCTTT
TCCCACGAAGGAATTAACTACCTCTACATCCGTCACAGCAACCTTTACAT
TCTTGCCCTGACTAAGAAGAACACCAATGCCACCGAGATCCTCCTTTTCC
TGCATAAGATCGTGGAGGTGTTCACGGAATACTTCAAGGTACTGGAGGAG
GAGAGTATCCGCGATAACTTTGTCATCATCTATGAATTGCTCGATGAGAT
GATGGACTTTGGATACCCGCAGACGACGGAGAGCAAGATATTGCAAGAAT
ACATTACCCAAGAATCACACAAGCTGGAGATCCAAGCCCGACCACCCATT
GCTGTCACCAATGCCGTGTCATGGCGAAGTGAGGGTATCCGGTACCGCAA
GAACGAAGTCTTCCTTGATGTTGTGGAGTCCCTTAACCTCCTCGTGTCCG
CGTCTGGTAACGTGTTGCGATCGGAGATTCTCGGAGCTATCAAGATGAAG
TGTTATCTGAGTGGTATGCCGGAGCTTCGTCTGGGCTTGAACGACAAGGT
CATGTTCGAAACCACGGGTCGCGCAACAAGAGGAAAGGCCGTCGAGATGG
AGGACGTCAAGTTCCATCAGTGTGTCCGACTTTCTCGGTTCGAGAATGAC
CGCACCATCAGCTTCATTCCCCCGGATGGCGAGTTCGAGCTGATGAGCTA
CCGGTTGAACACCCAAGTCAAGCCTCTGATTTGGGTGGAATGTCTGGTGG
AGTCGCACTCTGGTTCGCGCATGGAGTATATGTTGAAGGCCAAGGCCCAA
TTCAAGCGCCGCAGCACTGCCAACAACGTAGAAATCCTCGTCCCAGTCCC
AGAAGATGCCGACTCACCCCGTTTCCGCACCAACATCGGAACCGTGCACT
ACGCGCCTGAGAAATCCGCCATCATCTGGAAGATCAAGCAGTTCGGCGGA
GGCAAGGAGTTCCTCATGCGCGCAGAGCTGGGTCTGCCGTCCGTAAAGGG
CGACGACGAGCACGGCGGTGGCATGACCGGCGGTTTCGGAGGTAGCATGG
GTGGAACTGGGCAGGGCAAGGCAAAGCGGCCGATCAACGTCAAATTCGAA
ATCCCTTACTTCACTACTAGCGGTATCCAAGTCCGGTACTTGAAGATCAC
GGAACCTAAGCTACAATACCCCTCCCTCCCATGGGTGCGATATATAACAC
AATCAGGCGACATTGCTGTCCGCATGCCAGATGTACAATGAATGGCGTCG
GCCATCTTCTTCCTCGATCTCAAGGGCAAGACCCTTCTAGCCCGAAACTA
CCGCGGAGACATCCCCATGTCCGCCGTCGAAAAATTCCCCATCCTACTCA
GTGACGCCGAAGAAGAGAGCTCCGCCGTGGCTCCGTGCTTTTCCCACGAA
GGAATTAACTACCTCTACATCCGTCACAGCAACCTTTACATTCTTGCCCT
GACTAAGAAGAACACCAATGCCACCGAGATCCTCCTTTTCCTGCATAAGA
TCGTGGAGGTGTTCACGGAATACTTCAAGGTACTGGAGGAGGAGAGTATC
CGCGATAACTTTGTCATCATCTATGAATTGCTCGATGAGATGATGGACTT
TGGATACCCGCAGACGACGGAGAGCAAGATATTGCAAGAATACATTACCC
AAGAATCACACAAGCTGGAGATCCAAGCCCGACCACCCATTGCTGTCACC
AATGCCGTGTCATGGCGAAGTGAGGGTATCCGGTACCGCAAGAACGAAGT
CTTCCTTGATGTTGTGGAGTCCCTTAACCTCCTCGTGTCCGCGTCTGGTA
ACGTGTTGCGATCGGAGATTCTCGGAGCTATCAAGATGAAGTGTTATCTG
AGTGGTATGCCGGAGCTTCGTCTGGGCTTGAACGACAAGGTCATGTTCGA
AACCACGGGTCGCGCAACAAGAGGAAAGGCCGTCGAGATGGAGGACGTCA
AGTTCCATCAGTGTGTCCGACTTTCTCGGTTCGAGAATGACCGCACCATC
AGCTTCATTCCCCCGGATGGCGAGTTCGAGCTGATGAGCTACCGGTTGAA
CACCCAAGTCAAGCCTCTGATTTGGGTGGAATGTCTGGTGGAGTCGCACT
CTGGTTCGCGCATGGAGTATATGTTGAAGGCCAAGGCCCAATTCAAGCGC
CGCAGCACTGCCAACAACGTAGAAATCCTCGTCCCAGTCCCAGAAGATGC
CGACTCACCCCGTTTCCGCACCAACATCGGAACCGTGCACTACGCGCCTG
AGAAATCCGCCATCATCTGGAAGATCAAGCAGTTCGGCGGAGGCAAGGAG
TTCCTCATGCGCGCAGAGCTGGGTCTGCCGTCCGTAAAGGGCGACGACGA
GCACGGCGGTGGCATGACCGGCGGTTTCGGAGGTAGCATGGGTGGAACTG
GGCAGGGCAAGGCAAAGCGGCCGATCAACGTCAAATTCGAAATCCCTTAC
TTCACTACTAGCGGTATCCAAGTCCGGTACTTGAAGATCACGGAACCTAA
GCTACAATACCCCTCCCTCCCATGGGTGCGATATATAACACAATCAGGCG
ACATTGCTGTCCGCATGCCAGATGTACAATGAATGGCGTCGGCCATCTTC
TTCCTCGATCTCAAGGGCAAGACCCTTCTAGCCCGAAACTACCGCGGAGA
CATCCCCATGTCCGCCGTCGAAAAATTCCCCATCCTACTCAGTGACGCCG
AAGAAGAGAGCTCCGCCGTGGCTCCGTGCTTTTCCCACGAAGGAATTAAC
TACCTCTACATCCGTCACAGCAACCTTTACATTCTTGCCCTGACTAAGAA
GAACACCAATGCCACCGAGATCCTCCTTTTCCTGCATAAGATCGTGGAGG
TGTTCACGGAATACTTCAAGGTACTGGAGGAGGAGAGTATCCGCGATAAC
TTTGTCATCATCTATGAATTGCTCGATGAGATGATGGACTTTGGATACCC
GCAGACGACGGAGAGCAAGATATTGCAAGAATACATTACCCAAGAATCAC
ACAAGCTGGAGATCCAAGCCCGACCACCCATTGCTGTCACCAATGCCGTG
TCATGGCGAAGTGAGGGTATCCGGTACCGCAAGAACGAAGTCTTCCTTGA
TGTTGTGGAGTCCCTTAACCTCCTCGTGTCCGCGTCTGGTAACGTGTTGC
GATCGGAGATTCTCGGAGCTATCAAGATGAAGTGTTATCTGAGTGGTATG
CCGGAGCTTCGTCTGGGCTTGAACGACAAGGTCATGTTCGAAACCACGGG
TCGCGCAACAAGAGGAAAGGCCGTCGAGATGGAGGACGTCAAGTTCCATC
AGTGTGTCCGACTTTCTCGGTTCGAGAATGACCGCACCATCAGCTTCATT
CCCCCGGATGGCGAGTTCGAGCTGATGAGCTACCGGTTGAACACCCAAGT
CAAGCCTCTGATTTGGGTGGAATGTCTGGTGGAGTCGCACTCTGGTTCGC
GCATGGAGTATATGTTGAAGGCCAAGGCCCAATTCAAGCGCCGCAGCACT
GCCAACAACGTAGAAATCCTCGTCCCAGTCCCAGAAGATGCCGACTCACC
CCGTTTCCGCACCAACATCGGAACCGTGCACTACGCGCCTGAGAAATCCG
CCATCATCTGGAAGATCAAGCAGTTCGGCGGAGGCAAGGAGTTCCTCATG
CGCGCAGAGCTGGGTCTGCCGTCCGTAAAGGGCGACGACGAGCACGGCGG
TGGCATGACCGGCGGTTTCGGAGGTAGCATGGGTGGAACTGGGCAGGGCA
AGGCAAAGCGGCCGATCAACGTCAAATTCGAAATCCCTTACTTCACTACT
AGCGGTATCCAAGTCCGGTACTTGAAGATCACGGAACCTAAGCTACAATA
CCCCTCCCTCCCATGGGTGCGATATATAACACAATCAGGCGACATTGCTG
TCCGCATGCCAGATGTACAATGAATGGCGTCGGCCATCTTCTTCCTCGAT
CTCAAGGGCAAGACCCTTCTAGCCCGAAACTACCGCGGAGACATCCCCAT
GTCCGCCGTCGAAAAATTCCCCATCCTACTCAGTGACGCCGAAGAAGAGA
GCTCCGCCGTGGCTCCGTGCTTTTCCCACGAAGGAATTAACTACCTCTAC
ATCCGTCACAGCAACCTTTACATTCTTGCCCTGACTAAGAAGAACACCAA
TGCCACCGAGATCCTCCTTTTCCTGCATAAGATCGTGGAGGTGTTCACGG
AATACTTCAAGGTACTGGAGGAGGAGAGTATCCGCGATAACTTTGTCATC
ATCTATGAATTGCTCGATGAGATGATGGACTTTGGATACCCGCAGACGAC
GGAGAGCAAGATATTGCAAGAATACATTACCCAAGAATCACACAAGCTGG
AGATCCAAGCCCGACCACCCATTGCTGTCACCAATGCCGTGTCATGGCGA
AGTGAGGGTATCCGGTACCGCAAGAACGAAGTCTTCCTTGATGTTGTGGA
GTCCCTTAACCTCCTCGTGTCCGCGTCTGGTAACGTGTTGCGATCGGAGA
TTCTCGGAGCTATCAAGATGAAGTGTTATCTGAGTGGTATGCCGGAGCTT
CGTCTGGGCTTGAACGACAAGGTCATGTTCGAAACCACGGGTCGCGCAAC
AAGAGGAAAGGCCGTCGAGATGGAGGACGTCAAGTTCCATCAGTGTGTCC
GACTTTCTCGGTTCGAGAATGACCGCACCATCAGCTTCATTCCCCCGGAT
GGCGAGTTCGAGCTGATGAGCTACCGGTTGAACACCCAAGTCAAGCCTCT
GATTTGGGTGGAATGTCTGGTGGAGTCGCACTCTGGTTCGCGCATGGAGT
ATATGTTGAAGGCCAAGGCCCAATTCAAGCGCCGCAGCACTGCCAACAAC
GTAGAAATCCTCGTCCCAGTCCCAGAAGATGCCGACTCACCCCGTTTCCG
CACCAACATCGGAACCGTGCACTACGCGCCTGAGAAATCCGCCATCATCT
GGAAGATCAAGCAGTTCGGCGGAGGCAAGGAGTTCCTCATGCGCGCAGAG
CTGGGTCTGCCGTCCGTAAAGGGCGACGACGAGCACGGCGGTGGCATGAC
CGGCGGTTTCGGAGGTAGCATGGGTGGAACTGGGCAGGGCAAGGCAAAGC
GGCCGATCAACGTCAAATTCGAAATCCCTTACTTCACTACTAGCGGTATC
CAAGTCCGGTACTTGAAGATCACGGAACCTAAGCTACAATACCCCTCCCT
CCCATGGGTGCGATATATAACACAATCAGGCGACATTGCTGTCCGCATGC
CAGATGTACAATGAATGGCGTCGGCCATCTTCTTCCTCGATCTCAAGGGC
AAGACCCTTCTAGCCCGAAACTACCGCGGAGACATCCCCATGTCCGCCGT
CGAAAAATTCCCCATCCTACTCAGTGACGCCGAAGAAGAGAGCTCCGCCG
TGGCTCCGTGCTTTTCCCACGAAGGAATTAACTACCTCTACATCCGTCAC
AGCAACCTTTACATTCTTGCCCTGACTAAGAAGAACACCAATGCCACCGA
GATCCTCCTTTTCCTGCATAAGATCGTGGAGGTGTTCACGGAATACTTCA
AGGTACTGGAGGAGGAGAGTATCCGCGATAACTTTGTCATCATCTATGAA
TTGCTCGATGAGATGATGGACTTTGGATACCCGCAGACGACGGAGAGCAA
GATATTGCAAGAATACATTACCCAAGAATCACACAAGCTGGAGATCCAAG
CCCGACCACCCATTGCTGTCACCAATGCCGTGTCATGGCGAAGTGAGGGT
ATCCGGTACCGCAAGAACGAAGTCTTCCTTGATGTTGTGGAGTCCCTTAA
CCTCCTCGTGTCCGCGTCTGGTAACGTGTTGCGATCGGAGATTCTCGGAG
CTATCAAGATGAAGTGTTATCTGAGTGGTATGCCGGAGCTTCGTCTGGGC
TTGAACGACAAGGTCATGTTCGAAACCACGGGTCGCGCAACAAGAGGAAA
GGCCGTCGAGATGGAGGACGTCAAGTTCCATCAGTGTGTCCGACTTTCTC
GGTTCGAGAATGACCGCACCATCAGCTTCATTCCCCCGGATGGCGAGTTC
GAGCTGATGAGCTACCGGTTGAACACCCAAGTCAAGCCTCTGATTTGGGT
GGAATGTCTGGTGGAGTCGCACTCTGGTTCGCGCATGGAGTATATGTTGA
AGGCCAAGGCCCAATTCAAGCGCCGCAGCACTGCCAACAACGTAGAAATC
CTCGTCCCAGTCCCAGAAGATGCCGACTCACCCCGTTTCCGCACCAACAT
CGGAACCGTGCACTACGCGCCTGAGAAATCCGCCATCATCTGGAAGATCA
AGCAGTTCGGCGGAGGCAAGGAGTTCCTCATGCGCGCAGAGCTGGGTCTG
CCGTCCGTAAAGGGCGACGACGAGCACGGCGGTGGCATGACCGGCGGTTT
CGGAGGTAGCATGGGTGGAACTGGGCAGGGCAAGGCAAAGCGGCCGATCA
ACGTCAAATTCGAAATCCCTTACTTCACTACTAGCGGTATCCAAGTCCGG
TACTTGAAGATCACGGAACCTAAGCTACAATACCCCTCCCTCCCATGGGT
GCGATATATAACACAATCAGGCGACATTGCTGTCCGCATGCCAGATGTAC
AATGAATGGCGTCGGCCATCTTCTTCCTCGATCTCAAGGGCAAGACCCTT
CTAGCCCGAAACTACCGCGGAGACATCCCCATGTCCGCCGTCGAAAAATT
CCCCATCCTACTCAGTGACGCCGAAGAAGAGAGCTCCGCCGTGGCTCCGT
GCTTTTCCCACGAAGGAATTAACTACCTCTACATCCGTCACAGCAACCTT
TACATTCTTGCCCTGACTAAGAAGAACACCAATGCCACCGAGATCCTCCT
TTTCCTGCATAAGATCGTGGAGGTGTTCACGGAATACTTCAAGGTACTGG
AGGAGGAGAGTATCCGCGATAACTTTGTCATCATCTATGAATTGCTCGAT
GAGATGATGGACTTTGGATACCCGCAGACGACGGAGAGCAAGATATTGCA
AGAATACATTACCCAAGAATCACACAAGCTGGAGATCCAAGCCCGACCAC
CCATTGCTGTCACCAATGCCGTGTCATGGCGAAGTGAGGGTATCCGGTAC
CGCAAGAACGAAGTCTTCCTTGATGTTGTGGAGTCCCTTAACCTCCTCGT
GTCCGCGTCTGGTAACGTGTTGCGATCGGAGATTCTCGGAGCTATCAAGA
TGAAGTGTTATCTGAGTGGTATGCCGGAGCTTCGTCTGGGCTTGAACGAC
AAGGTCATGTTCGAAACCACGGGTCGCGCAACAAGAGGAAAGGCCGTCGA
GATGGAGGACGTCAAGTTCCATCAGTGTGTCCGACTTTCTCGGTTCGAGA
ATGACCGCACCATCAGCTTCATTCCCCCGGATGGCGAGTTCGAGCTGATG
AGCTACCGGTTGAACACCCAAGTCAAGCCTCTGATTTGGGTGGAATGTCT
GGTGGAGTCGCACTCTGGTTCGCGCATGGAGTATATGTTGAAGGCCAAGG
CCCAATTCAAGCGCCGCAGCACTGCCAACAACGTAGAAATCCTCGTCCCA
GTCCCAGAAGATGCCGACTCACCCCGTTTCCGCACCAACATCGGAACCGT
GCACTACGCGCCTGAGAAATCCGCCATCATCTGGAAGATCAAGCAGTTCG
GCGGAGGCAAGGAGTTCCTCATGCGCGCAGAGCTGGGTCTGCCGTCCGTA
AAGGGCGACGACGAGCACGGCGGTGGCATGACCGGCGGTTTCGGAGGTAG
CATGGGTGGAACTGGGCAGGGCAAGGCAAAGCGGCCGATCAACGTCAAAT
TCGAAATCCCTTACTTCACTACTAGCGGTATCCAAGTCCGGTACTTGAAG
ATCACGGAACCTAAGCTACAATACCCCTCCCTCCCATGGGTGCGATATAT
AACACAATCAGGCGACATTGCTGTCCGCATGCCAGATGTACAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030131 | clathrin adaptor complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
| GO:0006886 | intracellular protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036168 |
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR018240 |
| DBxref | InterPro:IPR022775 |
| DBxref | InterPro:IPR028565 |
| DBxref | InterPro:IPR001392 |
| DBxref | PFAM:PF01217 |
| DBxref | PFAM:PF00928 |
| Product | AP-1 complex subunit mu-1-Iike |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:677443..679285 + |
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