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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:900030..901655- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004477-T1 ID=CBS51388_004477-T1|Name=CBS51388_004477-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1626bp|location=Sequence derived from alignment at An07:900030..901655- (Aspergillus niger CBS 513.88)
ATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTATGT
CCCAGCCCAGGTAATGCAATCCTTCATCTCCTAGGAGTCTGTCTGATTGC
CTGATCAAACAGTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGT
CTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACT
GCACCGATAGAGAGGGTATGTTCTAATCAAAATACACCATCCTGTCTTTT
CAAGTACTGAGAATTCCAACTAACCAACCGTTCAGATGTTTGCTCTCTAG
CACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAAC
TCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAA
GTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAA
GCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCT
CTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGA
CGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTC
GTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCG
CTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTA
CGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCC
ATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGAC
CTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGA
CCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCA
AGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCG
AACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGAC
CTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTC
TGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCC
TCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAG
CTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCA
TGTTTAGTGTAAGTCACACCCATGTCCCCAAATTGAACTATATATCCATC
AGTTCTAACGCATATTGTGGATAAAGTACGGCAGCGGTCTAGCCAGCACT
CTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCATGGTTGAGAAAAT
CGATCTCATGAACCGCCTGAATCAGAGACATATCGCTACGCCCGAGGAAT
ATGAAGAGGTAAGCCAACAGAATTATGTAGCTTTCTCGATCCTTTGGTGA
TCAAGTTGTTGCTCTATACTGATACAGTGTATATCAAGGCCTGTACACTC
CGACTGAAAGCCTACGGAAGCAATGACTATACTCCATCTGGAGACATAGC
CTCCCTAGCACCGGGAACATACTACTTGGAGAAAATTGATGAGGTGTATC
GGCGGACTTATGCTATCAAATCTTGA back to topCoding sequence (CDS) from alignment at An07:900030..901655- >CBS51388_004477-T1 ID=CBS51388_004477-T1|Name=CBS51388_004477-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6780bp|location=Sequence derived from alignment at An07:900030..901655- (Aspergillus niger CBS 513.88)
GCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGACTATACTCCATC
TGGAGACATAGCCTCCCTAGCACCGGGAACATACTACTTGGAGAAAATTG
ATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGATACGGCAGCGGT
CTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAACCCCAT
GGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGAGACATATCGCTA
CGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCACTAACAGCCGTGT
CCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGTCGTCTC
GAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAAGTCCGT
TCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAGGTATTG
ACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAACGCTATA
AACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGTCGTAGC
ATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCGGTGGTG
CAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCCCTGGAC
CATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTACAAACC
AGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAATCACTT
GCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGTCGCAGA
AGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGACTACAT
GGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACGGTCGAC
TCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGACACAGAT
CTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGAATCCCT
CAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAGATCAGT
TCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGTGGAAAT
ATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAGTAATAT
CGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTTGTCTGG
ATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCCGGCAAGTACACC
ATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGATAGAGAGGATGG
CATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTATGTCCCA
GCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGACTATAC
TCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACATACTACTTGGAGA
AAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGATACGGC
AGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGACCTAAA
CCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGAGACATA
TCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCACTAACAG
CCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCCATCGGT
CGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTCCATCAA
GTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCATTGAAG
GTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTCTTCAAC
GCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGCCATCGT
CGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTCCTACCG
GTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTCCTCTCC
CTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGACTTCTA
CAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATGAATCAA
TCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTCCTCCGT
CGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCTCTTCGA
CTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGTCGTACG
GTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAACCCAGAC
ACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTACGAAGA
ATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGACAAAAG
ATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCTTTGTGT
GGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTTGATCAG
TAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGTTTAGTT
GTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCCGGCAAG
TACACCATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGATAGAGA
GGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAGATCTAT
GTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAGCAATGA
CTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACATACTACT
TGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAATCTTGA
TACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAACCGGCGA
CCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGAATCAGA
GACATATCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTCTAGCAC
TAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCCAACTCC
ATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGCCAAGTC
CATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACACAAGCA
TTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAATGCTCTC
TTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCGAGACGC
CATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCAGTCGTC
CTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAACGCGCTC
CTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACACGTACGA
CTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATGGCCATG
AATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAGGACCTC
CTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCTCGACCT
CTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCAGCAAGT
CGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGCTCGAAC
CCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCTGACCTA
CGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAGCTCTGA
CAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCGCCCTCT
TTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCATCAGCTT
GATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTGGCATGT
TTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTCTCAGCC
GGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACTGCACCGA
TAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCCATGGAG
ATCTATGTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTACGGAAG
CAATGACTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGGGAACAT
ACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCTATCAAA
TCTTGATACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAAAGTAAC
CGGCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACCGCCTGA
ATCAGAGACATATCGCTACGCCCGAGGAATATGAAGAGATGTTTGCTCTC
TAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATTGACCCC
AACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGACAAGGC
CAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCGGCAACA
CAAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGAACTAAT
GCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGACGGGCG
AGACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGTCTTCCA
GTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGCCCCAAC
GCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGACACACAC
GTACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCGTCAATG
GCCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGCCACAAG
GACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAATGTCCT
CGACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGCTAGTCA
GCAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAGTCGAGC
TCGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCGCACCCT
GACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCCTTGTAG
CTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATCGCTGCG
CCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTCACTCAT
CAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAACTATTG
GCATGTTTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAAGGTGTC
TCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAATTACTG
CACCGATAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATTAAGGCC
ATGGAGATCTATGTCCCAGCCCAGGCCTGTACACTCCGACTGAAAGCCTA
CGGAAGCAATGACTATACTCCATCTGGAGACATAGCCTCCCTAGCACCGG
GAACATACTACTTGGAGAAAATTGATGAGGTGTATCGGCGGACTTATGCT
ATCAAATCTTGATACGGCAGCGGTCTAGCCAGCACTCTCTTCGCCTTCAA
AGTAACCGGCGACCTAAACCCCATGGTTGAGAAAATCGATCTCATGAACC
GCCTGAATCAGAGACATATCGCTACGCCCGAGGAATATGAAGAGATGTTT
GCTCTCTAGCACTAACAGCCGTGTCCTCCCTCCTCAGGAAATACAGCATT
GACCCCAACTCCATCGGTCGTCTCGAAGTAGGCACGGAATCCCTGATCGA
CAAGGCCAAGTCCATCAAGTCCGTTCTTACAACCCTCTTCGAGCCTTCCG
GCAACACAAGCATTGAAGGTATTGACACTATTCACGCCTGCTACGGCGGA
ACTAATGCTCTCTTCAACGCTATAAACTGGGTCGAGTCCCGGTCCTGGGA
CGGGCGAGACGCCATCGTCGTAGCATCCGACATTGCCCTCTACAAAGAGT
CTTCCAGTCGTCCTACCGGTGGTGCAGGTTGCGTTGCCATGCTCGTGGGC
CCCAACGCGCTCCTCTCCCTGGACCATAGCATTAGAGGAGTCTATATGAC
ACACACGTACGACTTCTACAAACCAGACCTCAAATCAGAGTTCCCTCTCG
TCAATGGCCATGAATCAATCACTTGCTATATCCGCGCCCTGGACGGATGC
CACAAGGACCTCCTCCGTCGCAGAAGCGCGAACAACAAGAACGTCGAGAA
TGTCCTCGACCTCTTCGACTACATGGCCTTCCATACTCCAAACTGCAAGC
TAGTCAGCAAGTCGTACGGTCGACTCAAATATGACGACCTTCTACACCAG
TCGAGCTCGAACCCAGACACAGATCTGACTGCAATCCCACCTGAGCTCCG
CACCCTGACCTACGAAGAATCCCTCAAAGACAAAAATCTAGAGAAGACCC
TTGTAGCTCTGACAAAAGATCAGTTCAAGAAACGGGTCGAGCCATGCATC
GCTGCGCCCTCTTTGTGTGGAAATATGTACACAGGCAGTCTCTATTGCTC
ACTCATCAGCTTGATCAGTAATATCGATCTTGCCACTGCGGAGGGGAAAA
CTATTGGCATGTTTAGTTGTCTGGATCAAATCCTCTTCGAGAAACACCAA
GGTGTCTCAGCCGGCAAGTACACCATCGGACTGGGACTCAAGTGCATGAA
TTACTGCACCGATAGAGAGGATGGCATCTTACCCAGAGAATGTCGGCATT
AAGGCCATGGAGATCTATGTCCCAGCCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0004421 | hydroxymethylglutaryl-CoA synthase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010122 |
| DBxref | InterPro:IPR013528 |
| DBxref | InterPro:IPR013746 |
| DBxref | InterPro:IPR016039 |
| DBxref | PFAM:PF01154 |
| DBxref | PFAM:PF08540 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:900030..901655 - |
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