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CBS51388_004478-T1, CBS51388_004478-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004478-T1
Unique NameCBS51388_004478-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:902818..904611-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004478-T1 ID=CBS51388_004478-T1|Name=CBS51388_004478-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1794bp|location=Sequence derived from alignment at An07:902818..904611- (Aspergillus niger CBS 513.88)
ATGCGTGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGC
CCTTCCCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTT
TCCTCGCATTCTCGAGATATGTTGCCAGCTATACCCATCCTCACCATGCA
TCCGCCATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTT
CAAGGAGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTC
TACATAGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCAC
ATCGCAAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGA
TCCAGGCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCT
ACTCTGACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTT
GAAGGCGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGG
CACATACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTG
CTCAAGAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCA
AACCTTCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCG
CATTTTCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATAT
CCGTCGTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATG
AGCGATGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGG
ACCTCCTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACC
TTGGTGGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTT
GCTGTGGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAA
CCTCAACTATCCAAAAACGACCGTTCCTCTTAAGAACATCCCCGGTGACG
CCATCAGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGC
ACCAACCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGT
CGATGGCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTG
TCACTGGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAAC
AATGGTATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGA
GCTCTGCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTG
GCTTCATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGC
GCGAAGCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGT
CGTATTTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGGTAAGTCC
TCGGTCAGACATTATTCTTCTTCCTATCCTGTACTCACTACGTTTGCAGC
GGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGAT
CGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGC
GGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCG
GTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCA
GACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGG
TAGATGCTGATATGCAGACTCGATTTGGGGTGTTCCGGATGTGA
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Coding sequence (CDS) from alignment at An07:902818..904611-

>CBS51388_004478-T1 ID=CBS51388_004478-T1|Name=CBS51388_004478-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3474bp|location=Sequence derived from alignment at An07:902818..904611- (Aspergillus niger CBS 513.88)
CGGTCGCGCTTACTCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGA
TCGGTGTCATGGGCTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGG
CGGACAGCGGACCCCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGC
GGTCTTTTCCTCGGCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGC
AGACGAGACGGTTCCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGG
GTAGATGCTGATATGCAGACTCGATTTGGGGTGTTCCGGATGTGAATGCG
TGCTCCGTCTCCGCTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTC
CCTCCCGCTGTCTACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTC
GCATTCTCGAGATATGTTGCCAGCTATACCCATCCTCACCATGCATCCGC
CATATCGGCTCTTCCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGG
AGAACGCCCAGCAAATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACAT
AGCACAATTTCCCAAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGC
AAGAGGGAAAATGCTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAG
GCACCTCGTTCCTAGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCT
GACGACGTCCCAGCAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGG
CGTCACCTGTATGATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACAT
ACTACCCCATCACCGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAA
GAAAACAAGCTTCCCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCT
TCCCCACCAAGCAGATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTT
TCTTCAACCAAGCCCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTC
GTCATGGGCCCCTGCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGA
TGAGACGATCATTGTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTC
CTCTTGTCAAAGCTGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGT
GGGGGTCAGCTTCATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGT
GGACGATGCGCATGCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCA
ACTATCCAAAAACGACCGTTCCTCTTAAGAACATCCCCGGTGACGCCATC
AGAGAGCCGTTGTATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAA
CCTCCGGCGCCAGATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATG
GCAGTGAGTTTGCCGAATTCAAGCGGGACTATGGCACGACACTTGTCACT
GGCTTTGCTCGTATCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGG
TATCCTGTTCTCCGAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCT
GCGCGCAACGTAAAATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTC
ATGGTTGGCGCAGATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAA
GCTCGTTACGGCCGTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTAT
TTGGTTCCAGCGCTGGCGCGGGCAACTATGGAATGTGCGGTCGCGCTTAC
TCTCCGCGTCTTTTGTTCATGTGGCCCAACGCCAAGATCGGTGTCATGGG
CTCGGAGCAACTTTCTGCTGTCATGGAAGCTGTCGGGCGGACAGCGGACC
CCGATCTTAAGGCTCGGATTGATCGCGAATCGGAGGCGGTCTTTTCCTCG
GCACGGCTGTGGGACGATGGTGTTATTCCTCCCGCGCAGACGAGACGGTT
CCTTGGTCTGGGACTGGCGGCTGCTGTAGGTGGAAGGGTAGATGCTGATA
TGCAGACTCGATTTGGGGTGTTCCGGATGTGAATGCGTGCTCCGTCTCCG
CTCCTGCGGAGCTTGCGATCCAAACAACCCGCCCTTCCCTCCCGCTGTCT
ACCAGTGCGACAACGCTCAACGAGAACTCCTTTCCTCGCATTCTCGAGAT
ATGTTGCCAGCTATACCCATCCTCACCATGCATCCGCCATATCGGCTCTT
CCCACAGCTGTGGACACCTCGTCCTCGGATTTCAAGGAGAACGCCCAGCA
AATGCAGGAGCTCCTCGACCGGATGGCTAGTCTACATAGCACAATTTCCC
AAGGAGGGCCGCAGAAAGCCAAGGACAAGCACATCGCAAGAGGGAAAATG
CTCCCTCGCGACAGAGTTACCGCCCTCATTGATCCAGGCACCTCGTTCCT
AGAGCTCTCTCCACTCGCCGGCCATGATGTCTACTCTGACGACGTCCCAG
CAGGTGGCATCATAACAGGCATTGGAACAGTTGAAGGCGTCACCTGTATG
ATCGTTGCTAATGACAGCACGGTCAAGGGAGGCACATACTACCCCATCAC
CGTTAAAAAGCACCTACGCGCACAAGCAATTGCTCAAGAAAACAAGCTTC
CCTGCCTCTACCTCGTGGACTCTGGTGGTGCAAACCTTCCCCACCAAGCA
GATGTCTTTCCAGACAAGGAGCATTTTGGTCGCATTTTCTTCAACCAAGC
CCGCATGAGTTCCCTGGGCATTCCACAAATATCCGTCGTCATGGGCCCCT
GCACCGCTGGTGGGGCCTACGTCCCCGCTATGAGCGATGAGACGATCATT
GTCGAGAACCAAGGCACCATCTTTTTGGCCGGACCTCCTCTTGTCAAAGC
TGCTACAGGCGAGGAAGTCTCCGCAGAGGACCTTGGTGGGGGTCAGCTTC
ATAGCACAATCTCAGGTGTAACAGACTATCTTGCTGTGGACGATGCGCAT
GCCATTGTTCTCGCCCGGAGATCCATCTCCAACCTCAACTATCCAAAAAC
GACCGTTCCTCTTAAGAACATCCCCGGTGACGCCATCAGAGAGCCGTTGT
ATGATCCAACGGAGCTGAATGGCATCGTGGGCACCAACCTCCGGCGCCAG
ATTCCCGTCCACGAGGTCATCGCCCGTATCGTCGATGGCAGTGAGTTTGC
CGAATTCAAGCGGGACTATGGCACGACACTTGTCACTGGCTTTGCTCGTA
TCTTCGGGCATCAAGTCGGTATTGTCGCCAACAATGGTATCCTGTTCTCC
GAGTCCTCCCTGAAAGGAGCACACTTCATCGAGCTCTGCGCGCAACGTAA
AATTCCTCTAGTCTTCCTCCAGAATATTTCTGGCTTCATGGTTGGCGCAG
ATGCTGAAAAGGGCGGTATTGCAAAGAATGGCGCGAAGCTCGTTACGGCC
GTGGCCTGCGCAGACGTCCCTAAGTTCACAGTCGTATTTGGTTCCAGCGC
TGGCGCGGGCAACTATGGAATGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016874ligase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MCCC2CBS51388_004478Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004478-T1CBS51388_004478-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004478-T1.cdsCBS51388_004478-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004478-T1.exon2CBS51388_004478-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004478-T1.exon1CBS51388_004478-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR029045
DBxrefInterPro:IPR011762
DBxrefInterPro:IPR011763
DBxrefInterPro:IPR034733
DBxrefPFAM:PF01039
Product mitochondrial
ProductMethylcrotonoyl-CoA carboxylase beta chain
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:902818..904611 -
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