|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:1090850..1092753+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004531-T1 ID=CBS51388_004531-T1|Name=CBS51388_004531-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1904bp|location=Sequence derived from alignment at An07:1090850..1092753+ (Aspergillus niger CBS 513.88)
ATGGCCTTCAAACTACCCTTGTCTCAGCCCTCGCCCAGCGTGCGCACCCT
AGGACGCCGTGCCGCTAGAGCTCCAATTCTCAGAGCTCGGGGTGTTGCGA
CCGTACCTTTCCGTCTGCCAGCTGCCAGAAATGAGCCCAACGTGAGTTGC
TGGCTTCTCATCCGCTACCATGGCATACAAATACTAATCTCCTCTCCATG
ATAGCTGGACTACACTAGGGGCTCTCCAGAAAGGGCAGAGGTCGAAAAGG
TTTTGAAGCAGATGAAGTCACAGCTGCCGCTCAAGAGTCAGTCATACGTC
GGAGGCAAAGCGCTCTCGGTGTCCAACACATTGCAACAACCTCTGCCCGC
CGAACATGCCACTACTTTCACCAACTACCCTAGCGTGAATGCTGCACAAG
TAAATGCGGCTATTGATGCAGCATTGGAGGCAAAGGAAGCATGGCAGAAC
ACTCCCTTCGTTGACAGGGCTGCTATTTTCCTCAAGGCTGCCGAGCTTGT
CGCCGGCAAATACCGATACGAACTCATCGCTGCTACGATGTTGGGACAAG
GCAAGAACATCTGGCAGGGTGAGATCGATGCAGCTGCAGAGTTGGCCGAC
TTCTTCCGTCTGAACTGCAACTATGCTGCTGAGCTGCTGGAGAAGCAGCC
CGACCGCGGTACTGAGGGAATGTGGACGTGAGTGCAAGCCTTTTCATTTT
GGGATGCTCGAATACTAACCCTTCTCTAGCCGTGTGGACTACAGACCCTT
GGAGGGATTCGTTTACGCCGTGTCGCCTTTCAACTTCACTGCCATTGGCG
GGAACCTAATTAGCGGCCCAGCTCTTATGGGCAATGTCGTCGTCTGGAAG
CCTTCCGATTCGAACGTGTACGCGAGTGAGCTCGTCTACAAGATTCTCCT
CGAAGCTGGCCTGCCTCCCAATGTTATCCAGTTCGTTACTGGTGACGCGC
AGGAGATCACTCAGACGGTGCTTGGACGCAGAGAGTTTGGTGGCCTCAAC
TTCACCGGTTCCTCGGACGTCTTCCGTTCTCTGTATGCTCAGGTCGGCGA
AAACATCGGCAAGAAGGTCTACCGGGACTACCCTCGTCTAGTTGGCGAGA
CCAGCGGCAAGAACTTCCACCTGGTTCATCCCACTGCTGATATCCAGAGT
GCTGTTTACCATACCCTTCGGGGTGCTTTTGAGTACCAGGGACAAAAGTG
CTCGGCGACGTCCCGACTGTACCTGCCTGAGTCTCGGGCACAGGAGTTCT
TGGAGAAGTTGAAGTCCGAGATCAAGGAGATCACGATCGGGTCGCCGGAG
GAGATGGGAGCTTTCATGGGCCCTGTTATCCACAAAGCATCTTTCGAGAA
GATTAAGTCGGTCATCGATGCCAGCAACAAGGATCCATCCTTGGAGTTGA
TTGCTGGTGGTACCTACGACGGCTCAACCGGATATTACGTGCACCCTACT
GTGTACCGGGCTAAGGACCCCAACCATGAGCTGTTCGACAAGGAGATCTT
CGGTCCAGTGCTCGCAGTCTACGTCTATCCTGACGCCGAGTGGTCTTCAG
TCTTGAAGACGGTCGACCAGAGTGGAGGTGGCTTTGCTTTGACCGGAGCT
GTGTTCGCAGGTGATCGGCGTGCCATCCGCGAGGCCGAGGATACCTTGCG
GTATTCGGCTGGAAACTTCTACATCAGTAAGTGATCATGCTGTTCTTCTC
TATAAGTCACTACTAACAAGTTACGCAACAGACTGCAAGACTACTGCCGC
CCTGATCGGACAACAGTCCTTTGGTGGCAGTCGCTCGAGCGGAACCAACG
ACAAGGCTGGAAGCGCCAATGTGCTTATGAGATTTGCCAGTCCCAGAACG
ATCAAGGAGGAATTCTTCCCCTTGAACGGCTTCCGGTACCCCAGCAACGA
GTAA back to topCoding sequence (CDS) from alignment at An07:1090850..1092753+ >CBS51388_004531-T1 ID=CBS51388_004531-T1|Name=CBS51388_004531-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6936bp|location=Sequence derived from alignment at An07:1090850..1092753+ (Aspergillus niger CBS 513.88)
ATGGCCTTCAAACTACCCTTGTCTCAGCCCTCGCCCAGCGTGCGCACCCT
AGGACGCCGTGCCGCTAGAGCTCCAATTCTCAGAGCTCGGGGTGTTGCGA
CCGTACCTTTCCGTCTGCCAGCTGCCAGAAATGAGCCCAACCTGGACTAC
ACTAGGGGCTCTCCAGAAAGGGCAGAGGTCGAAAAGGTTTTGAAGCAGAT
GAAGTCACAGCTGCCGCTCAAGAGTCAGTCATACGTCGGAGGCAAAGCGC
TCTCGGTGTCCAACACATTGCAACAACCTCTGCCCGCCGAACATGCCACT
ACTTTCACCAACTACCCTAGCGTGAATGCTGCACAAGTAAATGCGGCTAT
TGATGCAGCATTGGAGGCAAAGGAAGCATGGCAGAACACTCCCTTCGTTG
ACAGGGCTGCTATTTTCCTCAAGGCTGCCGAGCTTGTCGCCGGCAAATAC
CGATACGAACTCATCGCTGCTACGATGTTGGGACAAGGCAAGAACATCTG
GCAGGGTGAGATCGATGCAGCTGCAGAGTTGGCCGACTTCTTCCGTCTGA
ACTGCAACTATGCTGCTGAGCTGCTGGAGAAGCAGCCCGACCGCGGTACT
GAGGGAATGTGGACCCGTGTGGACTACAGACCCTTGGAGGGATTCGTTTA
CGCCGTGTCGCCTTTCAACTTCACTGCCATTGGCGGGAACCTAATTAGCG
GCCCAGCTCTTATGGGCAATGTCGTCGTCTGGAAGCCTTCCGATTCGAAC
GTGTACGCGAGTGAGCTCGTCTACAAGATTCTCCTCGAAGCTGGCCTGCC
TCCCAATGTTATCCAGTTCGTTACTGGTGACGCGCAGGAGATCACTCAGA
CGGTGCTTGGACGCAGAGAGTTTGGTGGCCTCAACTTCACCGGTTCCTCG
GACGTCTTCCGTTCTCTGTATGCTCAGGTCGGCGAAAACATCGGCAAGAA
GGTCTACCGGGACTACCCTCGTCTAGTTGGCGAGACCAGCGGCAAGAACT
TCCACCTGGTTCATCCCACTGCTGATATCCAGAGTGCTGTTTACCATACC
CTTCGGGGTGCTTTTGAGTACCAGGGACAAAAGTGCTCGGCGACGTCCCG
ACTGTACCTGCCTGAGTCTCGGGCACAGGAGTTCTTGGAGAAGTTGAAGT
CCGAGATCAAGGAGATCACGATCGGGTCGCCGGAGGAGATGGGAGCTTTC
ATGGGCCCTGTTATCCACAAAGCATCTTTCGAGAAGATTAAGTCGGTCAT
CGATGCCAGCAACAAGGATCCATCCTTGGAGTTGATTGCTGGTGGTACCT
ACGACGGCTCAACCGGATATTACGTGCACCCTACTGTGTACCGGGCTAAG
GACCCCAACCATGAGCTGTTCGACAAGGAGATCTTCGGTCCAGTGCTCGC
AGTCTACGTCTATCCTGACGCCGAGTGGTCTTCAGTCTTGAAGACGGTCG
ACCAGAGTGGAGGTGGCTTTGCTTTGACCGGAGCTGTGTTCGCAGGTGAT
CGGCGTGCCATCCGCGAGGCCGAGGATACCTTGCGGTATTCGGCTGGAAA
CTTCTACATCAACTGCAAGACTACTGCCGCCCTGATCGGACAACAGTCCT
TTGGTGGCAGTCGCTCGAGCGGAACCAACGACAAGGCTGGAAGCGCCAAT
GTGCTTATGAGATTTGCCAGTCCCAGAACGATCAAGGAGGAATTCTTCCC
CTTGAACGGCTTCCGGTACCCCAGCAACGAGTAAATGGCCTTCAAACTAC
CCTTGTCTCAGCCCTCGCCCAGCGTGCGCACCCTAGGACGCCGTGCCGCT
AGAGCTCCAATTCTCAGAGCTCGGGGTGTTGCGACCGTACCTTTCCGTCT
GCCAGCTGCCAGAAATGAGCCCAACCTGGACTACACTAGGGGCTCTCCAG
AAAGGGCAGAGGTCGAAAAGGTTTTGAAGCAGATGAAGTCACAGCTGCCG
CTCAAGAGTCAGTCATACGTCGGAGGCAAAGCGCTCTCGGTGTCCAACAC
ATTGCAACAACCTCTGCCCGCCGAACATGCCACTACTTTCACCAACTACC
CTAGCGTGAATGCTGCACAAGTAAATGCGGCTATTGATGCAGCATTGGAG
GCAAAGGAAGCATGGCAGAACACTCCCTTCGTTGACAGGGCTGCTATTTT
CCTCAAGGCTGCCGAGCTTGTCGCCGGCAAATACCGATACGAACTCATCG
CTGCTACGATGTTGGGACAAGGCAAGAACATCTGGCAGGGTGAGATCGAT
GCAGCTGCAGAGTTGGCCGACTTCTTCCGTCTGAACTGCAACTATGCTGC
TGAGCTGCTGGAGAAGCAGCCCGACCGCGGTACTGAGGGAATGTGGACCC
GTGTGGACTACAGACCCTTGGAGGGATTCGTTTACGCCGTGTCGCCTTTC
AACTTCACTGCCATTGGCGGGAACCTAATTAGCGGCCCAGCTCTTATGGG
CAATGTCGTCGTCTGGAAGCCTTCCGATTCGAACGTGTACGCGAGTGAGC
TCGTCTACAAGATTCTCCTCGAAGCTGGCCTGCCTCCCAATGTTATCCAG
TTCGTTACTGGTGACGCGCAGGAGATCACTCAGACGGTGCTTGGACGCAG
AGAGTTTGGTGGCCTCAACTTCACCGGTTCCTCGGACGTCTTCCGTTCTC
TGTATGCTCAGGTCGGCGAAAACATCGGCAAGAAGGTCTACCGGGACTAC
CCTCGTCTAGTTGGCGAGACCAGCGGCAAGAACTTCCACCTGGTTCATCC
CACTGCTGATATCCAGAGTGCTGTTTACCATACCCTTCGGGGTGCTTTTG
AGTACCAGGGACAAAAGTGCTCGGCGACGTCCCGACTGTACCTGCCTGAG
TCTCGGGCACAGGAGTTCTTGGAGAAGTTGAAGTCCGAGATCAAGGAGAT
CACGATCGGGTCGCCGGAGGAGATGGGAGCTTTCATGGGCCCTGTTATCC
ACAAAGCATCTTTCGAGAAGATTAAGTCGGTCATCGATGCCAGCAACAAG
GATCCATCCTTGGAGTTGATTGCTGGTGGTACCTACGACGGCTCAACCGG
ATATTACGTGCACCCTACTGTGTACCGGGCTAAGGACCCCAACCATGAGC
TGTTCGACAAGGAGATCTTCGGTCCAGTGCTCGCAGTCTACGTCTATCCT
GACGCCGAGTGGTCTTCAGTCTTGAAGACGGTCGACCAGAGTGGAGGTGG
CTTTGCTTTGACCGGAGCTGTGTTCGCAGGTGATCGGCGTGCCATCCGCG
AGGCCGAGGATACCTTGCGGTATTCGGCTGGAAACTTCTACATCAACTGC
AAGACTACTGCCGCCCTGATCGGACAACAGTCCTTTGGTGGCAGTCGCTC
GAGCGGAACCAACGACAAGGCTGGAAGCGCCAATGTGCTTATGAGATTTG
CCAGTCCCAGAACGATCAAGGAGGAATTCTTCCCCTTGAACGGCTTCCGG
TACCCCAGCAACGAGTAAATGGCCTTCAAACTACCCTTGTCTCAGCCCTC
GCCCAGCGTGCGCACCCTAGGACGCCGTGCCGCTAGAGCTCCAATTCTCA
GAGCTCGGGGTGTTGCGACCGTACCTTTCCGTCTGCCAGCTGCCAGAAAT
GAGCCCAACCTGGACTACACTAGGGGCTCTCCAGAAAGGGCAGAGGTCGA
AAAGGTTTTGAAGCAGATGAAGTCACAGCTGCCGCTCAAGAGTCAGTCAT
ACGTCGGAGGCAAAGCGCTCTCGGTGTCCAACACATTGCAACAACCTCTG
CCCGCCGAACATGCCACTACTTTCACCAACTACCCTAGCGTGAATGCTGC
ACAAGTAAATGCGGCTATTGATGCAGCATTGGAGGCAAAGGAAGCATGGC
AGAACACTCCCTTCGTTGACAGGGCTGCTATTTTCCTCAAGGCTGCCGAG
CTTGTCGCCGGCAAATACCGATACGAACTCATCGCTGCTACGATGTTGGG
ACAAGGCAAGAACATCTGGCAGGGTGAGATCGATGCAGCTGCAGAGTTGG
CCGACTTCTTCCGTCTGAACTGCAACTATGCTGCTGAGCTGCTGGAGAAG
CAGCCCGACCGCGGTACTGAGGGAATGTGGACCCGTGTGGACTACAGACC
CTTGGAGGGATTCGTTTACGCCGTGTCGCCTTTCAACTTCACTGCCATTG
GCGGGAACCTAATTAGCGGCCCAGCTCTTATGGGCAATGTCGTCGTCTGG
AAGCCTTCCGATTCGAACGTGTACGCGAGTGAGCTCGTCTACAAGATTCT
CCTCGAAGCTGGCCTGCCTCCCAATGTTATCCAGTTCGTTACTGGTGACG
CGCAGGAGATCACTCAGACGGTGCTTGGACGCAGAGAGTTTGGTGGCCTC
AACTTCACCGGTTCCTCGGACGTCTTCCGTTCTCTGTATGCTCAGGTCGG
CGAAAACATCGGCAAGAAGGTCTACCGGGACTACCCTCGTCTAGTTGGCG
AGACCAGCGGCAAGAACTTCCACCTGGTTCATCCCACTGCTGATATCCAG
AGTGCTGTTTACCATACCCTTCGGGGTGCTTTTGAGTACCAGGGACAAAA
GTGCTCGGCGACGTCCCGACTGTACCTGCCTGAGTCTCGGGCACAGGAGT
TCTTGGAGAAGTTGAAGTCCGAGATCAAGGAGATCACGATCGGGTCGCCG
GAGGAGATGGGAGCTTTCATGGGCCCTGTTATCCACAAAGCATCTTTCGA
GAAGATTAAGTCGGTCATCGATGCCAGCAACAAGGATCCATCCTTGGAGT
TGATTGCTGGTGGTACCTACGACGGCTCAACCGGATATTACGTGCACCCT
ACTGTGTACCGGGCTAAGGACCCCAACCATGAGCTGTTCGACAAGGAGAT
CTTCGGTCCAGTGCTCGCAGTCTACGTCTATCCTGACGCCGAGTGGTCTT
CAGTCTTGAAGACGGTCGACCAGAGTGGAGGTGGCTTTGCTTTGACCGGA
GCTGTGTTCGCAGGTGATCGGCGTGCCATCCGCGAGGCCGAGGATACCTT
GCGGTATTCGGCTGGAAACTTCTACATCAACTGCAAGACTACTGCCGCCC
TGATCGGACAACAGTCCTTTGGTGGCAGTCGCTCGAGCGGAACCAACGAC
AAGGCTGGAAGCGCCAATGTGCTTATGAGATTTGCCAGTCCCAGAACGAT
CAAGGAGGAATTCTTCCCCTTGAACGGCTTCCGGTACCCCAGCAACGAGT
AAATGGCCTTCAAACTACCCTTGTCTCAGCCCTCGCCCAGCGTGCGCACC
CTAGGACGCCGTGCCGCTAGAGCTCCAATTCTCAGAGCTCGGGGTGTTGC
GACCGTACCTTTCCGTCTGCCAGCTGCCAGAAATGAGCCCAACCTGGACT
ACACTAGGGGCTCTCCAGAAAGGGCAGAGGTCGAAAAGGTTTTGAAGCAG
ATGAAGTCACAGCTGCCGCTCAAGAGTCAGTCATACGTCGGAGGCAAAGC
GCTCTCGGTGTCCAACACATTGCAACAACCTCTGCCCGCCGAACATGCCA
CTACTTTCACCAACTACCCTAGCGTGAATGCTGCACAAGTAAATGCGGCT
ATTGATGCAGCATTGGAGGCAAAGGAAGCATGGCAGAACACTCCCTTCGT
TGACAGGGCTGCTATTTTCCTCAAGGCTGCCGAGCTTGTCGCCGGCAAAT
ACCGATACGAACTCATCGCTGCTACGATGTTGGGACAAGGCAAGAACATC
TGGCAGGGTGAGATCGATGCAGCTGCAGAGTTGGCCGACTTCTTCCGTCT
GAACTGCAACTATGCTGCTGAGCTGCTGGAGAAGCAGCCCGACCGCGGTA
CTGAGGGAATGTGGACCCGTGTGGACTACAGACCCTTGGAGGGATTCGTT
TACGCCGTGTCGCCTTTCAACTTCACTGCCATTGGCGGGAACCTAATTAG
CGGCCCAGCTCTTATGGGCAATGTCGTCGTCTGGAAGCCTTCCGATTCGA
ACGTGTACGCGAGTGAGCTCGTCTACAAGATTCTCCTCGAAGCTGGCCTG
CCTCCCAATGTTATCCAGTTCGTTACTGGTGACGCGCAGGAGATCACTCA
GACGGTGCTTGGACGCAGAGAGTTTGGTGGCCTCAACTTCACCGGTTCCT
CGGACGTCTTCCGTTCTCTGTATGCTCAGGTCGGCGAAAACATCGGCAAG
AAGGTCTACCGGGACTACCCTCGTCTAGTTGGCGAGACCAGCGGCAAGAA
CTTCCACCTGGTTCATCCCACTGCTGATATCCAGAGTGCTGTTTACCATA
CCCTTCGGGGTGCTTTTGAGTACCAGGGACAAAAGTGCTCGGCGACGTCC
CGACTGTACCTGCCTGAGTCTCGGGCACAGGAGTTCTTGGAGAAGTTGAA
GTCCGAGATCAAGGAGATCACGATCGGGTCGCCGGAGGAGATGGGAGCTT
TCATGGGCCCTGTTATCCACAAAGCATCTTTCGAGAAGATTAAGTCGGTC
ATCGATGCCAGCAACAAGGATCCATCCTTGGAGTTGATTGCTGGTGGTAC
CTACGACGGCTCAACCGGATATTACGTGCACCCTACTGTGTACCGGGCTA
AGGACCCCAACCATGAGCTGTTCGACAAGGAGATCTTCGGTCCAGTGCTC
GCAGTCTACGTCTATCCTGACGCCGAGTGGTCTTCAGTCTTGAAGACGGT
CGACCAGAGTGGAGGTGGCTTTGCTTTGACCGGAGCTGTGTTCGCAGGTG
ATCGGCGTGCCATCCGCGAGGCCGAGGATACCTTGCGGTATTCGGCTGGA
AACTTCTACATCAACTGCAAGACTACTGCCGCCCTGATCGGACAACAGTC
CTTTGGTGGCAGTCGCTCGAGCGGAACCAACGACAAGGCTGGAAGCGCCA
ATGTGCTTATGAGATTTGCCAGTCCCAGAACGATCAAGGAGGAATTCTTC
CCCTTGAACGGCTTCCGGTACCCCAGCAACGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003842 | 1-pyrroline-5-carboxylate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0010133 | proline catabolic process to glutamate |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016161 |
| DBxref | InterPro:IPR029510 |
| DBxref | InterPro:IPR016160 |
| DBxref | InterPro:IPR005931 |
| DBxref | InterPro:IPR016162 |
| DBxref | InterPro:IPR015590 |
| DBxref | InterPro:IPR016163 |
| DBxref | PFAM:PF00171 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:1090850..1092753 + |
|
