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CBS51388_004560-T1, CBS51388_004560-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004560-T1
Unique NameCBS51388_004560-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1164860..1166485-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004560-T1 ID=CBS51388_004560-T1|Name=CBS51388_004560-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1626bp|location=Sequence derived from alignment at An07:1164860..1166485- (Aspergillus niger CBS 513.88)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAAACATTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
CGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCC
GCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGA
GGCACAGATGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGACTC
TGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACAT
GGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCTCCCAGCGAC
CCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGA
TCTGCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACG
TGCGCAGCGGTGCATTTATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTG
GTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGA
AAACCGGTCCGCCATGACATTCAAGATGGGCGCAGCGATTGAGACGGTGC
TCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATC
GCGGTGCTGGATATCGTGGCCGGTAAGCCCCTGCACATGATTCAGAGCCA
CCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGC
TCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGG
AACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGC
GATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTTGGTATGC
AGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATC
CGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCT
GGAAGAGCACGACCGGAAGGCGGCCAAGCAAAAGAAGCAGCGCGGATCCG
GATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGAC
ATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTG
GGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGACCAGGTGC
TGCGGTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGG
CATCGGTCCGCGCTGCGGGCGTCCCTGCAGAATCGCGACGAGGTGACGCT
GCAGCCGGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGG
TGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGC
AACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGACTGCACCG
GCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGG
GAATGTTGGAGATGCTTGCTGCATGA
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Coding sequence (CDS) from alignment at An07:1164860..1166485-

>CBS51388_004560-T1 ID=CBS51388_004560-T1|Name=CBS51388_004560-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1626bp|location=Sequence derived from alignment at An07:1164860..1166485- (Aspergillus niger CBS 513.88)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAAACATTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
CGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCC
GCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGA
GGCACAGATGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGACTC
TGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACAT
GGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCTCCCAGCGAC
CCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGA
TCTGCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACG
TGCGCAGCGGTGCATTTATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTG
GTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGA
AAACCGGTCCGCCATGACATTCAAGATGGGCGCAGCGATTGAGACGGTGC
TCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATC
GCGGTGCTGGATATCGTGGCCGGTAAGCCCCTGCACATGATTCAGAGCCA
CCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGC
TCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGG
AACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGC
GATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTTGGTATGC
AGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATC
CGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCT
GGAAGAGCACGACCGGAAGGCGGCCAAGCAAAAGAAGCAGCGCGGATCCG
GATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGAC
ATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTG
GGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGACCAGGTGC
TGCGGTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGG
CATCGGTCCGCGCTGCGGGCGTCCCTGCAGAATCGCGACGAGGTGACGCT
GCAGCCGGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGG
TGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGC
AACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGACTGCACCG
GCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGG
GAATGTTGGAGATGCTTGCTGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004560CBS51388_004560Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004560-T1.cdsCBS51388_004560-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004560-T1.exon1CBS51388_004560-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004560-T1CBS51388_004560-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261MMR
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR018983
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF09384
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1164860..1166485 -
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