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CBS51388_004610-T1, CBS51388_004610-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004610-T1
Unique NameCBS51388_004610-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1288726..1289991+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004610-T1 ID=CBS51388_004610-T1|Name=CBS51388_004610-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1266bp|location=Sequence derived from alignment at An07:1288726..1289991+ (Aspergillus niger CBS 513.88)
ATGCCCTTGATGCCCTCACGCCAGATTTATCTCCCCACGGAAATTGTGGT
GGAGATTATTTCTTACGCCGCCGCAGATGATGGCCATCGCCAGTCCACTC
TCTATGCCTGCTGCCTTGTCTCTCGCCAATGGTACTCAGTAGCCATCCCA
TATCTCTATGAGAAGCCGCGCGTGAGCGCCGGGACCGCTTTCAAGAGTTT
TACCGACACAATCTGCCCGACGATCGGCGCACGAAAGAACAAGATACATC
TGGGCAGTCTAGTCCACAAATTGGACCTCAGTGGGCTCGTCTATCATAGC
TCAAACAGTTTGACAGCACGACTGCTGGGAAGGGTGAAAGAGAATTTAGA
AGTCTTTCTGGCCCCAAGGATCTCCTTTGCGTAAGTACAAAACAACATGC
TCGTTGTGCATGCCTTCCGTCTGTCTTCGCCCACTTCAGAATACTTGATA
CTAACACTATAGAACAGCATCAACAGCCTTCCGGCTCTCTCCAAATGTAC
AAACATCAGACACCTCGACTTATCGCTAGTCGGCGATCCAATCCCTTTTC
CCAACCTCAAGAAAGCGATCAGCAACCTCCGCAGATTAACCACCCTTCGT
CTTCCGCGCTCAACCTCCATCACCACCTACGACGACTCTGCAGCCACGAT
AGAATGGCCTCCTAACCTCCAGCGCCTACAATTCAGCGGCCACTACCGTT
CCATACCCATGTCCTCCTTTCCTTGGCCTCGCACCTTGACTACCCTCACT
CTAAAGAACTGCGCCGATCTCTCCATGTCCAGCCTTGGCAGCCTAATGAG
CAACCCCCAACTAGCCACCCTCAAACGCTTCATCGTCTCCGGCTCCAACC
GTAACCTGCAACCAGAATCCATCAATGCCATCCCAGTTTTCCTCCCTGAA
TTATCCTCCCTCAGTATCCCTGGCGATCTAGTCAATGATTCCTTCTTCGA
TATCCTCAGCCACATGCACCCCCCACTACCTCTCGAGGATATCGAGTTTG
GATTCCCAAGTCTAGACGCCAACGTGACCTTCAGCACGAGCTCGTTAATC
ACAGCGATGGAATACGGCCTAGCAAACCTCCGATCGGTGGGTTTCTCGGA
GCTCTTCTGCACCAACCAGCGAATTTTGGAAGACACGGAGATCGATGACT
TCATTCATAGCCGGTTCTCGAAGAAGGAGCGAAGAAATTCCAAATCTTCT
TTCAAGAATGGGGTAGAGAAGAGCGATTATGTGGATGATGATACGATTGG
CGTTTATTACATATGA
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Coding sequence (CDS) from alignment at An07:1288726..1289991+

>CBS51388_004610-T1 ID=CBS51388_004610-T1|Name=CBS51388_004610-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2358bp|location=Sequence derived from alignment at An07:1288726..1289991+ (Aspergillus niger CBS 513.88)
ATGCCCTTGATGCCCTCACGCCAGATTTATCTCCCCACGGAAATTGTGGT
GGAGATTATTTCTTACGCCGCCGCAGATGATGGCCATCGCCAGTCCACTC
TCTATGCCTGCTGCCTTGTCTCTCGCCAATGGTACTCAGTAGCCATCCCA
TATCTCTATGAGAAGCCGCGCGTGAGCGCCGGGACCGCTTTCAAGAGTTT
TACCGACACAATCTGCCCGACGATCGGCGCACGAAAGAACAAGATACATC
TGGGCAGTCTAGTCCACAAATTGGACCTCAGTGGGCTCGTCTATCATAGC
TCAAACAGTTTGACAGCACGACTGCTGGGAAGGGTGAAAGAGAATTTAGA
AGTCTTTCTGGCCCCAAGGATCTCCTTTGCCATCAACAGCCTTCCGGCTC
TCTCCAAATGTACAAACATCAGACACCTCGACTTATCGCTAGTCGGCGAT
CCAATCCCTTTTCCCAACCTCAAGAAAGCGATCAGCAACCTCCGCAGATT
AACCACCCTTCGTCTTCCGCGCTCAACCTCCATCACCACCTACGACGACT
CTGCAGCCACGATAGAATGGCCTCCTAACCTCCAGCGCCTACAATTCAGC
GGCCACTACCGTTCCATACCCATGTCCTCCTTTCCTTGGCCTCGCACCTT
GACTACCCTCACTCTAAAGAACTGCGCCGATCTCTCCATGTCCAGCCTTG
GCAGCCTAATGAGCAACCCCCAACTAGCCACCCTCAAACGCTTCATCGTC
TCCGGCTCCAACCGTAACCTGCAACCAGAATCCATCAATGCCATCCCAGT
TTTCCTCCCTGAATTATCCTCCCTCAGTATCCCTGGCGATCTAGTCAATG
ATTCCTTCTTCGATATCCTCAGCCACATGCACCCCCCACTACCTCTCGAG
GATATCGAGTTTGGATTCCCAAGTCTAGACGCCAACGTGACCTTCAGCAC
GAGCTCGTTAATCACAGCGATGGAATACGGCCTAGCAAACCTCCGATCGG
TGGGTTTCTCGGAGCTCTTCTGCACCAACCAGCGAATTTTGGAAGACACG
GAGATCGATGACTTCATTCATAGCCGGTTCTCGAAGAAGGAGCGAAGAAA
TTCCAAATCTTCTTTCAAGAATGGGGTAGAGAAGAGCGATTATGTGGATG
ATGATACGATTGGCGTTTATTACATATGAATGCCCTTGATGCCCTCACGC
CAGATTTATCTCCCCACGGAAATTGTGGTGGAGATTATTTCTTACGCCGC
CGCAGATGATGGCCATCGCCAGTCCACTCTCTATGCCTGCTGCCTTGTCT
CTCGCCAATGGTACTCAGTAGCCATCCCATATCTCTATGAGAAGCCGCGC
GTGAGCGCCGGGACCGCTTTCAAGAGTTTTACCGACACAATCTGCCCGAC
GATCGGCGCACGAAAGAACAAGATACATCTGGGCAGTCTAGTCCACAAAT
TGGACCTCAGTGGGCTCGTCTATCATAGCTCAAACAGTTTGACAGCACGA
CTGCTGGGAAGGGTGAAAGAGAATTTAGAAGTCTTTCTGGCCCCAAGGAT
CTCCTTTGCCATCAACAGCCTTCCGGCTCTCTCCAAATGTACAAACATCA
GACACCTCGACTTATCGCTAGTCGGCGATCCAATCCCTTTTCCCAACCTC
AAGAAAGCGATCAGCAACCTCCGCAGATTAACCACCCTTCGTCTTCCGCG
CTCAACCTCCATCACCACCTACGACGACTCTGCAGCCACGATAGAATGGC
CTCCTAACCTCCAGCGCCTACAATTCAGCGGCCACTACCGTTCCATACCC
ATGTCCTCCTTTCCTTGGCCTCGCACCTTGACTACCCTCACTCTAAAGAA
CTGCGCCGATCTCTCCATGTCCAGCCTTGGCAGCCTAATGAGCAACCCCC
AACTAGCCACCCTCAAACGCTTCATCGTCTCCGGCTCCAACCGTAACCTG
CAACCAGAATCCATCAATGCCATCCCAGTTTTCCTCCCTGAATTATCCTC
CCTCAGTATCCCTGGCGATCTAGTCAATGATTCCTTCTTCGATATCCTCA
GCCACATGCACCCCCCACTACCTCTCGAGGATATCGAGTTTGGATTCCCA
AGTCTAGACGCCAACGTGACCTTCAGCACGAGCTCGTTAATCACAGCGAT
GGAATACGGCCTAGCAAACCTCCGATCGGTGGGTTTCTCGGAGCTCTTCT
GCACCAACCAGCGAATTTTGGAAGACACGGAGATCGATGACTTCATTCAT
AGCCGGTTCTCGAAGAAGGAGCGAAGAAATTCCAAATCTTCTTTCAAGAA
TGGGGTAGAGAAGAGCGATTATGTGGATGATGATACGATTGGCGTTTATT
ACATATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004610CBS51388_004610Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004610-T1.exon1CBS51388_004610-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004610-T1.exon2CBS51388_004610-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004610-T1.cdsCBS51388_004610-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004610-T1CBS51388_004610-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1288726..1289991 +
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