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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:1419056..1419900+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004654-T1 ID=CBS51388_004654-T1|Name=CBS51388_004654-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=845bp|location=Sequence derived from alignment at An07:1419056..1419900+ (Aspergillus niger CBS 513.88)
ATGGCAGACAAGAAGACTTCCTCGTAAGTACTCCATGTCCAGTACCCTCG
AAAAACACACTTCTCCGTACACCTTCGCTATAGCCCACCCCTCCCCTCTC
AACCCAAATATCCCCAAATCACAACCCCCCTCCAACTACAACACCCACAA
ACCCCCCCTCAACAACCACAACCCAGACCACGACTAACTCTTTCCCCCCG
GGAAATCCAGAGTAACACCCCCCACCAACCCGCGCGGCATTCCCGCCGCC
CCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGCGCAGCGAAGTCGA
GCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAGTACCAATTCATGG
AAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGACAAGATCCCCGAC
ATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAACTCAGAAGAGAAAG
CGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTGAACGATACGTTGT
ACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGAAGTGTATCTCTGG
CTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGGAGGCTGAGAGCAT
GTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTCGGGAACTGTGAGG
AGGATTTGGAATTTTTGAGGGAGCAAATTACGGTATGTCCTTCTCTCTGG
TTTCTTTTTCTTTGGTTTCTGGGGCTAATGGTATTTGTAGACGCTTGAGG
TTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGAAAGAA
AAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA back to topCoding sequence (CDS) from alignment at An07:1419056..1419900+ >CBS51388_004654-T1 ID=CBS51388_004654-T1|Name=CBS51388_004654-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1800bp|location=Sequence derived from alignment at An07:1419056..1419900+ (Aspergillus niger CBS 513.88)
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA
ATGGCAGACAAGAAGACTTCCTCAGTAACACCCCCCACCAACCCGCGCGG
CATTCCCGCCGCCCCCTTCGTCGACAATGTCGCCGACTACGTCTCCTCGC
GCAGCGAAGTCGAGCCGACACTGCGCTCCTTCCAAGAGATGATCTCGAAG
TACCAATTCATGGAAGTCAACACGCAGCGGCGGGCCCAAGGCCTGCGCGA
CAAGATCCCCGACATCAAGAAGACGTTGGAGATGGTGCGGTTCCTGAAAC
TCAGAAGAGAAAGCGCCTCGGACAAGCCTCTCGAAACGAACTTCGAACTG
AACGATACGTTGTACGCAAGGGCGACGGTCTCCCCCGCCGACACGGAGGA
AGTGTATCTCTGGCTTGGCGCGAATGTCATGCTTGCGTACCCGATTGAGG
AGGCTGAGAGCATGTTGGATGACAAGTTGTCTGCTGCGGAGAAGAGTCTC
GGGAACTGTGAGGAGGATTTGGAATTTTTGAGGGAGCAAATTACGACGCT
TGAGGTTGCGACGGCTCGGGTCTATAATTGGGATGTGGTGCAGAGACGGA
AAGAAAAGGCGGAGGGTAAAGGAGATGATGAAGGGGAGAAGGCCGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016272 | prefoldin complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006457 | protein folding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264UVA |
| DBxref | InterPro:IPR004127 |
| DBxref | InterPro:IPR016655 |
| DBxref | InterPro:IPR009053 |
| DBxref | PFAM:PF02996 |
| Product | peptide chain release factor 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:1419056..1419900 + |
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