You are here

Home

CBS51388_004684-T1, CBS51388_004684-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004684-T1
Unique NameCBS51388_004684-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1494699..1497469-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004684-T1 ID=CBS51388_004684-T1|Name=CBS51388_004684-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2771bp|location=Sequence derived from alignment at An07:1494699..1497469- (Aspergillus niger CBS 513.88)
ATGGCCTCTCTGCTCCGGCGGCCTGGCAACCTTGCTCGATATTCGAGGAG
AGCCGCAGACTGCCTTTACCGCACAAGGCCGCTCTCTGCACACGCTCCGC
AGTCGAGACTGTCAGCCCTGATTATCGCGCACCGAGCCAGGACGTTCGCT
ACTCAACCCACCGGTGGTCCGACCCCCCCGAACGACAATGGCAACAACAA
GAACTCGAGCTCATCAACCGGGCCCGGGAATAATGGCGGAGACCCGAAGA
AGCCGGAAGAGGAGAATGTGCTCACCAAGGAACAACAGAAACATCTAGAT
GAATTCATCGCACATCTGAAAGAACGGTCACCACGGAGTCAACATGAGAT
GCTCGACGACGTGAAACTGCATATCGAGAGGAACGGATTACCTCCGCCAG
TGAAGGATTTCATCGACAATCATATCTCCACCGGGCGTCCTGCCTCCCTC
ATGACATACATGCGTTTGATGCGCGACCTAGCCAGTTACCTCGATGATAT
CGCTCGTGGCGTAGCGCGGATCGAAAACGAGCGATTGATGAAGGAAATTG
AGGAACTAGAGAAGAAGAATGCAGAGGAAGGAGAGCAACCAGGGAAAGAG
GGGGAGAAGAAGGATCAGGAAGGAAAGAAGAAGGACCAAGAACAAGATAA
GCAGCGGAAGGACCAGAAGGACCAAAACCCATTCGGCAAGAATCCGGGAG
ACCCTCGAGATATGATTGTTTTCAAGCTCGACAACATATATTTCTGGGCG
GGCTTGATTGTCAGTTACTATATCTACCGCAGTTTCTACCCGAGCGAAAA
CAGCAGCGATATCACATGGCAGGAGTTCCGGGCCAACTTCCTCGACAGGG
GCTTAGTTGAGAGGCTGACCGTCATTAACAACACCCGGGTTCGGGTAGAA
CTTCACCGTGATGCGGTGGCTCAAGTCTACCCCGAGTCGCCTGCTGCTCA
TCCGGGATTCTACTACTACTTCACCATCGGATCCGTCGACGGCTTTGAGA
GGAAATTGGAGGAGGCCCAGCAGGAACTTGGTGTCCCTAGTGCTGAACGC
ATTCCGGTCAACTACCAGGGTGAAGTCCCCTGGGCTGCGACACTCATAAG
CTTCGGTCCCACGGTTCTTCTTTTGGCTGGTGTATATTTCCTGTCGAGAC
GTGCAGGTAGCGGAGGTGGTCAGGGTGGCATCTTTGGCATTGGCAAGAGC
CGTGCCAAACGTTTCAACCAAGAGACCGACATCAAGATCAAATTCTCCGA
CGTGGCTGGTATGGATGAAGCTAAGGTGGAAATCATGGAATTCGTCAGCT
TCCTGAAGAACCCGGAACGCTTCCAGAAGCTGGGTGCCAAAATCCCCCGT
GGTGCCATTCTTTCGGGTCCTCCGGGTACCGGTAAGACGTTACTTGCCAA
GGCCACGGCTGGTGAATCCGGCGTGCCCTTCTTCAGTGTCAGTGGTTCGG
AGTTTGTCGAGATGTTTGTCGGTGTCGGTCCTTCCCGAGTTCGTGATCTG
TTCGCCAACGCGCGGAAATCGACGCCCTGCATTATCTTCATCGATGAAAT
TGATGCTATCGGTAAATCAAGAGCGAAGTCGAACTACGGCGGCGGTAACG
ATGAACGCGAGAGCACCCTGAACCAGATCCTTACCGAAATGGATGGTTTC
AACACTTCCGAGCAAGTGGTGGTGTTGGCTGGTACGAACAGACCCGACGT
TCTCGATCAGGCTCTGATGCGTCCTGGACGATTCGATCGGCACATCTCTA
TCGACCGGCCTACCATGGATGGCCGTAAGCAGATCTTCGGCGTTCACTTG
AAGAAGATCGTGACGAAGGAGGACATGGAATACCTTCAAGGAAGACTTTC
GGCCTTGACACCCGGTTTTGCTGGTGCTGATATCGCAAACTGCGTTAACG
AAGCCGCTCTGGTTGGTATGTATAGAAATCCCTTGCAGAAGAGATGATTC
CCTATATTATTATCCCTATACTAACCAGCTTCTGTACAGCGGCCCGTGAA
AACGCCGATCATGTCACCATGAAGCACTTCGAGCAGGCCATTGAACGTGT
CATCGGTGGCTTGGAGAAGAAGTCTCTTGTGCTTTCACCCGAGGAGAAGC
GTGTTGTGGCCTACCACGAGGCCGGACATGCCATTTGTGGATGGTACTTC
CGCTGGGCTGATCCTCTTCTCAAGGTTTCCATCATCCCCCGTGGCCAAGG
CGCTCTGGGTTATGCCCAATATCTGCCCGCCAACGGCGACACCTACTTGA
TGAACGGAAACCAGCTCATGGACCGTATGGCCATGACCCTGGGAGGACGT
GTCAGCGAGGAACTGCACTTCGACACAGTCACTAGCGGAGCCAGCGACGA
CTTCAACAAGGTCACTCAGATGGCCACCGCCATGGTGACCAAGTTCGGTA
TGTCATCAAAGCTACGCTACATCTACTACGAGGAGGACCCGAAGAGCCAG
ATGCACAAGCCCTTCTCCGAAGAAACGGCTCGGGATATCGACGGTGAAGT
CCGCCGCATCATCGACCAGGCCCACAAGCAGTGCCACGATCTCCTGACCA
AGAAGAAGAAGGAAGTCGGCATCGTAGCCGAGGAACTCCTCTCCAAGGAG
GTCCTCAGCCGCGACGACATGATCCGTCTTCTCGGCCCGAGAGAATGGCC
CGAATCCAACGAGTTCGCCAAGTACTTCGACGGCCGCGGCGGCGCCACCA
TCGCTCCCCCTGAGCCCACGGAATCCACTGAAGGCAAGGACGGCCGCGAC
TCCACCCCTATCCCCCCATAG
back to top

Coding sequence (CDS) from alignment at An07:1494699..1497469-

>CBS51388_004684-T1 ID=CBS51388_004684-T1|Name=CBS51388_004684-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5394bp|location=Sequence derived from alignment at An07:1494699..1497469- (Aspergillus niger CBS 513.88)
CGGCCCGTGAAAACGCCGATCATGTCACCATGAAGCACTTCGAGCAGGCC
ATTGAACGTGTCATCGGTGGCTTGGAGAAGAAGTCTCTTGTGCTTTCACC
CGAGGAGAAGCGTGTTGTGGCCTACCACGAGGCCGGACATGCCATTTGTG
GATGGTACTTCCGCTGGGCTGATCCTCTTCTCAAGGTTTCCATCATCCCC
CGTGGCCAAGGCGCTCTGGGTTATGCCCAATATCTGCCCGCCAACGGCGA
CACCTACTTGATGAACGGAAACCAGCTCATGGACCGTATGGCCATGACCC
TGGGAGGACGTGTCAGCGAGGAACTGCACTTCGACACAGTCACTAGCGGA
GCCAGCGACGACTTCAACAAGGTCACTCAGATGGCCACCGCCATGGTGAC
CAAGTTCGGTATGTCATCAAAGCTACGCTACATCTACTACGAGGAGGACC
CGAAGAGCCAGATGCACAAGCCCTTCTCCGAAGAAACGGCTCGGGATATC
GACGGTGAAGTCCGCCGCATCATCGACCAGGCCCACAAGCAGTGCCACGA
TCTCCTGACCAAGAAGAAGAAGGAAGTCGGCATCGTAGCCGAGGAACTCC
TCTCCAAGGAGGTCCTCAGCCGCGACGACATGATCCGTCTTCTCGGCCCG
AGAGAATGGCCCGAATCCAACGAGTTCGCCAAGTACTTCGACGGCCGCGG
CGGCGCCACCATCGCTCCCCCTGAGCCCACGGAATCCACTGAAGGCAAGG
ACGGCCGCGACTCCACCCCTATCCCCCCATAGATGGCCTCTCTGCTCCGG
CGGCCTGGCAACCTTGCTCGATATTCGAGGAGAGCCGCAGACTGCCTTTA
CCGCACAAGGCCGCTCTCTGCACACGCTCCGCAGTCGAGACTGTCAGCCC
TGATTATCGCGCACCGAGCCAGGACGTTCGCTACTCAACCCACCGGTGGT
CCGACCCCCCCGAACGACAATGGCAACAACAAGAACTCGAGCTCATCAAC
CGGGCCCGGGAATAATGGCGGAGACCCGAAGAAGCCGGAAGAGGAGAATG
TGCTCACCAAGGAACAACAGAAACATCTAGATGAATTCATCGCACATCTG
AAAGAACGGTCACCACGGAGTCAACATGAGATGCTCGACGACGTGAAACT
GCATATCGAGAGGAACGGATTACCTCCGCCAGTGAAGGATTTCATCGACA
ATCATATCTCCACCGGGCGTCCTGCCTCCCTCATGACATACATGCGTTTG
ATGCGCGACCTAGCCAGTTACCTCGATGATATCGCTCGTGGCGTAGCGCG
GATCGAAAACGAGCGATTGATGAAGGAAATTGAGGAACTAGAGAAGAAGA
ATGCAGAGGAAGGAGAGCAACCAGGGAAAGAGGGGGAGAAGAAGGATCAG
GAAGGAAAGAAGAAGGACCAAGAACAAGATAAGCAGCGGAAGGACCAGAA
GGACCAAAACCCATTCGGCAAGAATCCGGGAGACCCTCGAGATATGATTG
TTTTCAAGCTCGACAACATATATTTCTGGGCGGGCTTGATTGTCAGTTAC
TATATCTACCGCAGTTTCTACCCGAGCGAAAACAGCAGCGATATCACATG
GCAGGAGTTCCGGGCCAACTTCCTCGACAGGGGCTTAGTTGAGAGGCTGA
CCGTCATTAACAACACCCGGGTTCGGGTAGAACTTCACCGTGATGCGGTG
GCTCAAGTCTACCCCGAGTCGCCTGCTGCTCATCCGGGATTCTACTACTA
CTTCACCATCGGATCCGTCGACGGCTTTGAGAGGAAATTGGAGGAGGCCC
AGCAGGAACTTGGTGTCCCTAGTGCTGAACGCATTCCGGTCAACTACCAG
GGTGAAGTCCCCTGGGCTGCGACACTCATAAGCTTCGGTCCCACGGTTCT
TCTTTTGGCTGGTGTATATTTCCTGTCGAGACGTGCAGGTAGCGGAGGTG
GTCAGGGTGGCATCTTTGGCATTGGCAAGAGCCGTGCCAAACGTTTCAAC
CAAGAGACCGACATCAAGATCAAATTCTCCGACGTGGCTGGTATGGATGA
AGCTAAGGTGGAAATCATGGAATTCGTCAGCTTCCTGAAGAACCCGGAAC
GCTTCCAGAAGCTGGGTGCCAAAATCCCCCGTGGTGCCATTCTTTCGGGT
CCTCCGGGTACCGGTAAGACGTTACTTGCCAAGGCCACGGCTGGTGAATC
CGGCGTGCCCTTCTTCAGTGTCAGTGGTTCGGAGTTTGTCGAGATGTTTG
TCGGTGTCGGTCCTTCCCGAGTTCGTGATCTGTTCGCCAACGCGCGGAAA
TCGACGCCCTGCATTATCTTCATCGATGAAATTGATGCTATCGGTAAATC
AAGAGCGAAGTCGAACTACGGCGGCGGTAACGATGAACGCGAGAGCACCC
TGAACCAGATCCTTACCGAAATGGATGGTTTCAACACTTCCGAGCAAGTG
GTGGTGTTGGCTGGTACGAACAGACCCGACGTTCTCGATCAGGCTCTGAT
GCGTCCTGGACGATTCGATCGGCACATCTCTATCGACCGGCCTACCATGG
ATGGCCGTAAGCAGATCTTCGGCGTTCACTTGAAGAAGATCGTGACGAAG
GAGGACATGGAATACCTTCAAGGAAGACTTTCGGCCTTGACACCCGGTTT
TGCTGGTGCTGATATCGCAAACTGCGTTAACGAAGCCGCTCTGGTTGCGG
CCCGTGAAAACGCCGATCATGTCACCATGAAGCACTTCGAGCAGGCCATT
GAACGTGTCATCGGTGGCTTGGAGAAGAAGTCTCTTGTGCTTTCACCCGA
GGAGAAGCGTGTTGTGGCCTACCACGAGGCCGGACATGCCATTTGTGGAT
GGTACTTCCGCTGGGCTGATCCTCTTCTCAAGGTTTCCATCATCCCCCGT
GGCCAAGGCGCTCTGGGTTATGCCCAATATCTGCCCGCCAACGGCGACAC
CTACTTGATGAACGGAAACCAGCTCATGGACCGTATGGCCATGACCCTGG
GAGGACGTGTCAGCGAGGAACTGCACTTCGACACAGTCACTAGCGGAGCC
AGCGACGACTTCAACAAGGTCACTCAGATGGCCACCGCCATGGTGACCAA
GTTCGGTATGTCATCAAAGCTACGCTACATCTACTACGAGGAGGACCCGA
AGAGCCAGATGCACAAGCCCTTCTCCGAAGAAACGGCTCGGGATATCGAC
GGTGAAGTCCGCCGCATCATCGACCAGGCCCACAAGCAGTGCCACGATCT
CCTGACCAAGAAGAAGAAGGAAGTCGGCATCGTAGCCGAGGAACTCCTCT
CCAAGGAGGTCCTCAGCCGCGACGACATGATCCGTCTTCTCGGCCCGAGA
GAATGGCCCGAATCCAACGAGTTCGCCAAGTACTTCGACGGCCGCGGCGG
CGCCACCATCGCTCCCCCTGAGCCCACGGAATCCACTGAAGGCAAGGACG
GCCGCGACTCCACCCCTATCCCCCCATAGATGGCCTCTCTGCTCCGGCGG
CCTGGCAACCTTGCTCGATATTCGAGGAGAGCCGCAGACTGCCTTTACCG
CACAAGGCCGCTCTCTGCACACGCTCCGCAGTCGAGACTGTCAGCCCTGA
TTATCGCGCACCGAGCCAGGACGTTCGCTACTCAACCCACCGGTGGTCCG
ACCCCCCCGAACGACAATGGCAACAACAAGAACTCGAGCTCATCAACCGG
GCCCGGGAATAATGGCGGAGACCCGAAGAAGCCGGAAGAGGAGAATGTGC
TCACCAAGGAACAACAGAAACATCTAGATGAATTCATCGCACATCTGAAA
GAACGGTCACCACGGAGTCAACATGAGATGCTCGACGACGTGAAACTGCA
TATCGAGAGGAACGGATTACCTCCGCCAGTGAAGGATTTCATCGACAATC
ATATCTCCACCGGGCGTCCTGCCTCCCTCATGACATACATGCGTTTGATG
CGCGACCTAGCCAGTTACCTCGATGATATCGCTCGTGGCGTAGCGCGGAT
CGAAAACGAGCGATTGATGAAGGAAATTGAGGAACTAGAGAAGAAGAATG
CAGAGGAAGGAGAGCAACCAGGGAAAGAGGGGGAGAAGAAGGATCAGGAA
GGAAAGAAGAAGGACCAAGAACAAGATAAGCAGCGGAAGGACCAGAAGGA
CCAAAACCCATTCGGCAAGAATCCGGGAGACCCTCGAGATATGATTGTTT
TCAAGCTCGACAACATATATTTCTGGGCGGGCTTGATTGTCAGTTACTAT
ATCTACCGCAGTTTCTACCCGAGCGAAAACAGCAGCGATATCACATGGCA
GGAGTTCCGGGCCAACTTCCTCGACAGGGGCTTAGTTGAGAGGCTGACCG
TCATTAACAACACCCGGGTTCGGGTAGAACTTCACCGTGATGCGGTGGCT
CAAGTCTACCCCGAGTCGCCTGCTGCTCATCCGGGATTCTACTACTACTT
CACCATCGGATCCGTCGACGGCTTTGAGAGGAAATTGGAGGAGGCCCAGC
AGGAACTTGGTGTCCCTAGTGCTGAACGCATTCCGGTCAACTACCAGGGT
GAAGTCCCCTGGGCTGCGACACTCATAAGCTTCGGTCCCACGGTTCTTCT
TTTGGCTGGTGTATATTTCCTGTCGAGACGTGCAGGTAGCGGAGGTGGTC
AGGGTGGCATCTTTGGCATTGGCAAGAGCCGTGCCAAACGTTTCAACCAA
GAGACCGACATCAAGATCAAATTCTCCGACGTGGCTGGTATGGATGAAGC
TAAGGTGGAAATCATGGAATTCGTCAGCTTCCTGAAGAACCCGGAACGCT
TCCAGAAGCTGGGTGCCAAAATCCCCCGTGGTGCCATTCTTTCGGGTCCT
CCGGGTACCGGTAAGACGTTACTTGCCAAGGCCACGGCTGGTGAATCCGG
CGTGCCCTTCTTCAGTGTCAGTGGTTCGGAGTTTGTCGAGATGTTTGTCG
GTGTCGGTCCTTCCCGAGTTCGTGATCTGTTCGCCAACGCGCGGAAATCG
ACGCCCTGCATTATCTTCATCGATGAAATTGATGCTATCGGTAAATCAAG
AGCGAAGTCGAACTACGGCGGCGGTAACGATGAACGCGAGAGCACCCTGA
ACCAGATCCTTACCGAAATGGATGGTTTCAACACTTCCGAGCAAGTGGTG
GTGTTGGCTGGTACGAACAGACCCGACGTTCTCGATCAGGCTCTGATGCG
TCCTGGACGATTCGATCGGCACATCTCTATCGACCGGCCTACCATGGATG
GCCGTAAGCAGATCTTCGGCGTTCACTTGAAGAAGATCGTGACGAAGGAG
GACATGGAATACCTTCAAGGAAGACTTTCGGCCTTGACACCCGGTTTTGC
TGGTGCTGATATCGCAAACTGCGTTAACGAAGCCGCTCTGGTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005524ATP binding
GO:0004222metalloendopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YTA12CBS51388_004684Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004684-T1CBS51388_004684-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004684-T1.cdsCBS51388_004684-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004684-T1.exon2CBS51388_004684-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004684-T1.exon1CBS51388_004684-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteMEROPS:MER0002605
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR037219
DBxrefInterPro:IPR000642
DBxrefInterPro:IPR011546
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR005936
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR003593
DBxrefPFAM:PF01434
DBxrefPFAM:PF06480
DBxrefPFAM:PF17862
DBxrefPFAM:PF00004
ProductMitochondrial inner membrane m-AAA protease component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1494699..1497469 -
Powered by Drupal