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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:1553578..1554630- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004700-T1 ID=CBS51388_004700-T1|Name=CBS51388_004700-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1053bp|location=Sequence derived from alignment at An07:1553578..1554630- (Aspergillus niger CBS 513.88)
ATGCCACGAGAATACGCCCCCGCCCACAGAAAACGCAAATCCCACGATAT
CTCCGACGATGCAGATGCTGCTGCAGCGCCCGGAGCCGGAGCAGGCCCGC
GCAAGAAAATCCTCCTCCCCAAGAAAGAACACAAATACCCGTCTGTCAAC
GAGCTCAAGAAACGTATCCGGGATGTGAAGCGTCTACTCAACAAGGCGGA
TTTGCCGGCCGATGCGCGCATCGTGCAGGAGCGCGCGTTGTCCGGGTATG
AGAAGGAATTGGAGGATGAGTTGAAGAGGAGGGATCGGTCGAAGATGATT
AAGAAGTATCATTTTGTTAGGTTTTTGGGTATGCTTTTCTTCCTCTACCC
CCGCCCTCTTTCTTACGATGTCTTGCTGTGCCGTGGGTTTTATATGGGGG
GCTGTTGCTAATTCGATACTCGATCTGTAGACCGCAAAACCGCAACCAAA
GACGTGAACCGGCTGGTGCGCCGCGAAAAGGAAGTCTCGAGTGCCGGACC
CGATGCCATGGATACCAAGACCAAGGAGAAGAAACTTGCTTCGTTGGCGG
AGAAGCTCCGAGTCGCTCGCGTGAACTTGAACTATACTATTTACTATCCA
TTGGATGAGAAGTATATCGCCTTGTACGCGGAGCAGAAGAAGAAGGTTAA
GGGAGACGGTGCGGAGGATGGTGGTGATGGCGCTGACTCGGACGGTGATG
CACGGTTTGGAATGGTGCATGCGACGGTTGCCGATAAGCCGGCGATGTGG
CATGTGGTGGAGAAGTGTATGAAGGATGGGACGTTGGATATGTTGAGGGA
TGGAAAGCTGGAGTCTGGGGCGAAGGCTGGGGAGAAGGATCGGAAGAAGG
AGGAGAGAAGTCAGAGGGCCGGTGATAAGGCGAAGAAGAGCCAAGAGCGT
GGGGTGTCGTCGTCGCAGGCTGGAAAGAGCAGGGACAGGTCCAGGAAGGT
GGATGATAGGAAGAGGTCTAGGGGCCCTGCTGAAGATCATGTCATGCGGG
ATGCAGGCAATGATGACGGCGATGAGAGTGATGGCGGTTTCTTTGAGATG
TGA back to topCoding sequence (CDS) from alignment at An07:1553578..1554630- >CBS51388_004700-T1 ID=CBS51388_004700-T1|Name=CBS51388_004700-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1902bp|location=Sequence derived from alignment at An07:1553578..1554630- (Aspergillus niger CBS 513.88)
ACCGCAAAACCGCAACCAAAGACGTGAACCGGCTGGTGCGCCGCGAAAAG
GAAGTCTCGAGTGCCGGACCCGATGCCATGGATACCAAGACCAAGGAGAA
GAAACTTGCTTCGTTGGCGGAGAAGCTCCGAGTCGCTCGCGTGAACTTGA
ACTATACTATTTACTATCCATTGGATGAGAAGTATATCGCCTTGTACGCG
GAGCAGAAGAAGAAGGTTAAGGGAGACGGTGCGGAGGATGGTGGTGATGG
CGCTGACTCGGACGGTGATGCACGGTTTGGAATGGTGCATGCGACGGTTG
CCGATAAGCCGGCGATGTGGCATGTGGTGGAGAAGTGTATGAAGGATGGG
ACGTTGGATATGTTGAGGGATGGAAAGCTGGAGTCTGGGGCGAAGGCTGG
GGAGAAGGATCGGAAGAAGGAGGAGAGAAGTCAGAGGGCCGGTGATAAGG
CGAAGAAGAGCCAAGAGCGTGGGGTGTCGTCGTCGCAGGCTGGAAAGAGC
AGGGACAGGTCCAGGAAGGTGGATGATAGGAAGAGGTCTAGGGGCCCTGC
TGAAGATCATGTCATGCGGGATGCAGGCAATGATGACGGCGATGAGAGTG
ATGGCGGTTTCTTTGAGATGTGAATGCCACGAGAATACGCCCCCGCCCAC
AGAAAACGCAAATCCCACGATATCTCCGACGATGCAGATGCTGCTGCAGC
GCCCGGAGCCGGAGCAGGCCCGCGCAAGAAAATCCTCCTCCCCAAGAAAG
AACACAAATACCCGTCTGTCAACGAGCTCAAGAAACGTATCCGGGATGTG
AAGCGTCTACTCAACAAGGCGGATTTGCCGGCCGATGCGCGCATCGTGCA
GGAGCGCGCGTTGTCCGGGTATGAGAAGGAATTGGAGGATGAGTTGAAGA
GGAGGGATCGGTCGAAGATGATTAAGAAGTATCATTTTGTTAGGTTTTTG
GACCGCAAAACCGCAACCAAAGACGTGAACCGGCTGGTGCGCCGCGAAAA
GGAAGTCTCGAGTGCCGGACCCGATGCCATGGATACCAAGACCAAGGAGA
AGAAACTTGCTTCGTTGGCGGAGAAGCTCCGAGTCGCTCGCGTGAACTTG
AACTATACTATTTACTATCCATTGGATGAGAAGTATATCGCCTTGTACGC
GGAGCAGAAGAAGAAGGTTAAGGGAGACGGTGCGGAGGATGGTGGTGATG
GCGCTGACTCGGACGGTGATGCACGGTTTGGAATGGTGCATGCGACGGTT
GCCGATAAGCCGGCGATGTGGCATGTGGTGGAGAAGTGTATGAAGGATGG
GACGTTGGATATGTTGAGGGATGGAAAGCTGGAGTCTGGGGCGAAGGCTG
GGGAGAAGGATCGGAAGAAGGAGGAGAGAAGTCAGAGGGCCGGTGATAAG
GCGAAGAAGAGCCAAGAGCGTGGGGTGTCGTCGTCGCAGGCTGGAAAGAG
CAGGGACAGGTCCAGGAAGGTGGATGATAGGAAGAGGTCTAGGGGCCCTG
CTGAAGATCATGTCATGCGGGATGCAGGCAATGATGACGGCGATGAGAGT
GATGGCGGTTTCTTTGAGATGTGAATGCCACGAGAATACGCCCCCGCCCA
CAGAAAACGCAAATCCCACGATATCTCCGACGATGCAGATGCTGCTGCAG
CGCCCGGAGCCGGAGCAGGCCCGCGCAAGAAAATCCTCCTCCCCAAGAAA
GAACACAAATACCCGTCTGTCAACGAGCTCAAGAAACGTATCCGGGATGT
GAAGCGTCTACTCAACAAGGCGGATTTGCCGGCCGATGCGCGCATCGTGC
AGGAGCGCGCGTTGTCCGGGTATGAGAAGGAATTGGAGGATGAGTTGAAG
AGGAGGGATCGGTCGAAGATGATTAAGAAGTATCATTTTGTTAGGTTTTT
GG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264UKL |
| DBxref | InterPro:IPR019310 |
| DBxref | PFAM:PF10153 |
| Product | 18S rRNA maturation protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:1553578..1554630 - |
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