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CBS51388_004709-T1, CBS51388_004709-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004709-T1
Unique NameCBS51388_004709-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1572444..1573574-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004709-T1 ID=CBS51388_004709-T1|Name=CBS51388_004709-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1131bp|location=Sequence derived from alignment at An07:1572444..1573574- (Aspergillus niger CBS 513.88)
ATGCTGAACCTCAATATCTTCCGGCTACTGGCCGATCTCTCCCATATCTC
CTCCAAATGTGTCTTGATATGGGCTATCCATCGCAATAAGAGCGCAGAAG
GTCCGTATAATAACTTGCATTGTTGCAGTGTGCTGCGAGCTAAGCATCGT
TTCAAATAATAGGAGTCTCCCTTCTGACGCAGATGCTCTATGCTTTGGTG
TTCGTGACTCGTTATCTCGACCTTTTCTCGAAGGCAGGATGGAAGCACTT
CTACCTCGTATTCTTCAAGCTATTTTATATCATCTCCTCGTTCTACGTTA
TATACCTGATGATGAGAGTATTTCCCCGGACACGGGAAAGGGAGCGAGCC
TGGAAGATGGCTATAATATCGGTCGCTCTATCTCTGGTTCTGGCTCCTAT
ATCTATTGTCATCTTCTATCGTGGTTATCCCGATAGATGGTTCACGGAGG
TAAGTGGGATGGCTCGCATTGGCCTGCAGACGTCGCTAACCAAACCGTGA
TGATATGCAGACTTGCTGGACTTTCTCGATTATATTAGAGTCCGTCTGTG
TTCTCCCTCAATTGTTGCTCTTGCGCCAAACGACCGTTCCGACAGTCATC
GATTCATACTACCTGCTTATGCTGGGATCCTACCGTGCCTTCTATATTCT
CAATTGGCTTGTGCGGGGACTGGGCTCTGAGGGTCATTGGGACGTAATTG
CAGACCTCTACGGTGTCATCCAGACGGCTTTCTACGTCGATTTCGCCTGG
GTTTACTACTCCCGCCAACGCGTGAAGCTCCGAAACGGCGGTGTCGTTGA
CTCGGAAGATTTCCGCCATAGCTGGCTAGTGAGCAAGATACTGAATTTCC
GGCAGCGAAGGAGTGCAGATGAGGAGCAGAATTTGAACGACGAGGACGTG
GAGGATGAGGAAGTTGCTGGTGGCGGTAGACCCAGGAACAACCGCTGGGG
AGCAATGGGGATCTCCGTCTCGGCCGACGATACGCTAGGAAACCATCGTG
GGACAAGCCAAGACGAGAGTCTGGAAGGGTTCTTAGAAGATGAAGAAGAC
GACGAGGACAATAACGGGTACCCTGTGAACGGGGGCGTTCGTCCGAAGCA
GTCAACCGGGGTAACGGGCAGTCACGAATGA
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Coding sequence (CDS) from alignment at An07:1572444..1573574-

>CBS51388_004709-T1 ID=CBS51388_004709-T1|Name=CBS51388_004709-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3024bp|location=Sequence derived from alignment at An07:1572444..1573574- (Aspergillus niger CBS 513.88)
ACTTGCTGGACTTTCTCGATTATATTAGAGTCCGTCTGTGTTCTCCCTCA
ATTGTTGCTCTTGCGCCAAACGACCGTTCCGACAGTCATCGATTCATACT
ACCTGCTTATGCTGGGATCCTACCGTGCCTTCTATATTCTCAATTGGCTT
GTGCGGGGACTGGGCTCTGAGGGTCATTGGGACGTAATTGCAGACCTCTA
CGGTGTCATCCAGACGGCTTTCTACGTCGATTTCGCCTGGGTTTACTACT
CCCGCCAACGCGTGAAGCTCCGAAACGGCGGTGTCGTTGACTCGGAAGAT
TTCCGCCATAGCTGGCTAGTGAGCAAGATACTGAATTTCCGGCAGCGAAG
GAGTGCAGATGAGGAGCAGAATTTGAACGACGAGGACGTGGAGGATGAGG
AAGTTGCTGGTGGCGGTAGACCCAGGAACAACCGCTGGGGAGCAATGGGG
ATCTCCGTCTCGGCCGACGATACGCTAGGAAACCATCGTGGGACAAGCCA
AGACGAGAGTCTGGAAGGGTTCTTAGAAGATGAAGAAGACGACGAGGACA
ATAACGGGTACCCTGTGAACGGGGGCGTTCGTCCGAAGCAGTCAACCGGG
GTAACGGGCAGTCACGAATGAGAGTCTCCCTTCTGACGCAGATGCTCTAT
GCTTTGGTGTTCGTGACTCGTTATCTCGACCTTTTCTCGAAGGCAGGATG
GAAGCACTTCTACCTCGTATTCTTCAAGCTATTTTATATCATCTCCTCGT
TCTACGTTATATACCTGATGATGAGAGTATTTCCCCGGACACGGGAAAGG
GAGCGAGCCTGGAAGATGGCTATAATATCGGTCGCTCTATCTCTGGTTCT
GGCTCCTATATCTATTGTCATCTTCTATCGTGGTTATCCCGATAGATGGT
TCACGGAGATGCTGAACCTCAATATCTTCCGGCTACTGGCCGATCTCTCC
CATATCTCCTCCAAATGTGTCTTGATATGGGCTATCCATCGCAATAAGAG
CGCAGAAGACTTGCTGGACTTTCTCGATTATATTAGAGTCCGTCTGTGTT
CTCCCTCAATTGTTGCTCTTGCGCCAAACGACCGTTCCGACAGTCATCGA
TTCATACTACCTGCTTATGCTGGGATCCTACCGTGCCTTCTATATTCTCA
ATTGGCTTGTGCGGGGACTGGGCTCTGAGGGTCATTGGGACGTAATTGCA
GACCTCTACGGTGTCATCCAGACGGCTTTCTACGTCGATTTCGCCTGGGT
TTACTACTCCCGCCAACGCGTGAAGCTCCGAAACGGCGGTGTCGTTGACT
CGGAAGATTTCCGCCATAGCTGGCTAGTGAGCAAGATACTGAATTTCCGG
CAGCGAAGGAGTGCAGATGAGGAGCAGAATTTGAACGACGAGGACGTGGA
GGATGAGGAAGTTGCTGGTGGCGGTAGACCCAGGAACAACCGCTGGGGAG
CAATGGGGATCTCCGTCTCGGCCGACGATACGCTAGGAAACCATCGTGGG
ACAAGCCAAGACGAGAGTCTGGAAGGGTTCTTAGAAGATGAAGAAGACGA
CGAGGACAATAACGGGTACCCTGTGAACGGGGGCGTTCGTCCGAAGCAGT
CAACCGGGGTAACGGGCAGTCACGAATGAGAGTCTCCCTTCTGACGCAGA
TGCTCTATGCTTTGGTGTTCGTGACTCGTTATCTCGACCTTTTCTCGAAG
GCAGGATGGAAGCACTTCTACCTCGTATTCTTCAAGCTATTTTATATCAT
CTCCTCGTTCTACGTTATATACCTGATGATGAGAGTATTTCCCCGGACAC
GGGAAAGGGAGCGAGCCTGGAAGATGGCTATAATATCGGTCGCTCTATCT
CTGGTTCTGGCTCCTATATCTATTGTCATCTTCTATCGTGGTTATCCCGA
TAGATGGTTCACGGAGATGCTGAACCTCAATATCTTCCGGCTACTGGCCG
ATCTCTCCCATATCTCCTCCAAATGTGTCTTGATATGGGCTATCCATCGC
AATAAGAGCGCAGAAGACTTGCTGGACTTTCTCGATTATATTAGAGTCCG
TCTGTGTTCTCCCTCAATTGTTGCTCTTGCGCCAAACGACCGTTCCGACA
GTCATCGATTCATACTACCTGCTTATGCTGGGATCCTACCGTGCCTTCTA
TATTCTCAATTGGCTTGTGCGGGGACTGGGCTCTGAGGGTCATTGGGACG
TAATTGCAGACCTCTACGGTGTCATCCAGACGGCTTTCTACGTCGATTTC
GCCTGGGTTTACTACTCCCGCCAACGCGTGAAGCTCCGAAACGGCGGTGT
CGTTGACTCGGAAGATTTCCGCCATAGCTGGCTAGTGAGCAAGATACTGA
ATTTCCGGCAGCGAAGGAGTGCAGATGAGGAGCAGAATTTGAACGACGAG
GACGTGGAGGATGAGGAAGTTGCTGGTGGCGGTAGACCCAGGAACAACCG
CTGGGGAGCAATGGGGATCTCCGTCTCGGCCGACGATACGCTAGGAAACC
ATCGTGGGACAAGCCAAGACGAGAGTCTGGAAGGGTTCTTAGAAGATGAA
GAAGACGACGAGGACAATAACGGGTACCCTGTGAACGGGGGCGTTCGTCC
GAAGCAGTCAACCGGGGTAACGGGCAGTCACGAATGAGAGTCTCCCTTCT
GACGCAGATGCTCTATGCTTTGGTGTTCGTGACTCGTTATCTCGACCTTT
TCTCGAAGGCAGGATGGAAGCACTTCTACCTCGTATTCTTCAAGCTATTT
TATATCATCTCCTCGTTCTACGTTATATACCTGATGATGAGAGTATTTCC
CCGGACACGGGAAAGGGAGCGAGCCTGGAAGATGGCTATAATATCGGTCG
CTCTATCTCTGGTTCTGGCTCCTATATCTATTGTCATCTTCTATCGTGGT
TATCCCGATAGATGGTTCACGGAGATGCTGAACCTCAATATCTTCCGGCT
ACTGGCCGATCTCTCCCATATCTCCTCCAAATGTGTCTTGATATGGGCTA
TCCATCGCAATAAGAGCGCAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046923ER retention sequence binding
Vocabulary: Biological Process
TermDefinition
GO:0006621protein retention in ER lumen
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004709CBS51388_004709Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004709-T1CBS51388_004709-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004709-T1.cdsCBS51388_004709-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004709-T1.exon3CBS51388_004709-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004709-T1.exon2CBS51388_004709-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004709-T1.exon1CBS51388_004709-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR000133
DBxrefPFAM:PF00810
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1572444..1573574 -
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