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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:1580107..1580751+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004710-T1 ID=CBS51388_004710-T1|Name=CBS51388_004710-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=645bp|location=Sequence derived from alignment at An07:1580107..1580751+ (Aspergillus niger CBS 513.88)
ATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCA
AGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAACA
CTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCG
GGTCGCACCTGGAGCGAGATTGCCAAGGTCCATAAAGCGCCCCTGCTTCA
ATACCCTCCACTACGTCACGCATGCTGACCTGAAATTCCCGGGTGCTACA
GACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGG
TAAGCAGATCCTAGTCGCTCTTTGTCCGAAGACAGGAGAAGATACTTAAG
CCACGACAGGACATGCACTATGCCGAATTTGCTGAAGATGAGGTAACGAC
CCTTGGCATACGACTTTTTTTTTTTTTTTTTTTTTTGTCAAGCGATGCTA
AAAGGAAGGACAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATG
CGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGTA
ACATCTCCGGGCCCTGTAGATGCCTTGCTGAGTTGTTGACATGAGTGAAT
CAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAG back to topCoding sequence (CDS) from alignment at An07:1580107..1580751+ >CBS51388_004710-T1 ID=CBS51388_004710-T1|Name=CBS51388_004710-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1920bp|location=Sequence derived from alignment at An07:1580107..1580751+ (Aspergillus niger CBS 513.88)
ATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCA
AGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAACA
CTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCG
GGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCCGGACCGAAGG
TAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATGCCGAATTTGCTG
AAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATGCGAAT
AAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGCGTGCGA
ACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATGGCGGCGCCAGGCG
CGGCTCCGGCAACTGGAGAAACCGCGCACGAGCAAGGGCCTGGGGGATCA
GAGCCTGCCCCCAAGAAGAAGGGGAGGACCAACACTCCTTGGACTGCTGA
GGAAGAGCAGAGGCTGAAGACTATGCGCGATGCGGGTCGCACCTGGAGCG
AGATTGCCAAGACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGCAT
TGGTACAAGGACATGCACTATGCCGAATTTGCTGAAGATGAGTCCGTAGC
ACTCCGAGAAGCGATTAGGGAATACGATGCGAATAAATGGAAGGCGATTG
GACTGAAAGTTGGAAAGCCAGCCAAGGCGTGCGAACAGTATGCAAAAGAA
CATTTCAAGGATCTTTAGATGGCGGCGCCAGGCGCGGCTCCGGCAACTGG
AGAAACCGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGA
AGAAGGGGAGGACCAACACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTG
AAGACTATGCGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATT
CCCTACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGC
ACTATGCCGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATT
AGGGAATACGATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAA
GCCAGCCAAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTT
AGATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAG
CAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAA
CACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATG
CGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCCGGACCGAA
GGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATGCCGAATTTGC
TGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATGCGA
ATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGCGTGC
GAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATGGCGGCGCCAGG
CGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCAAGGGCCTGGGGGAT
CAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAACACTCCTTGGACTGCT
GAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCGGGTCGCACCTGGAG
CGAGATTGCCAAGACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGC
ATTGGTACAAGGACATGCACTATGCCGAATTTGCTGAAGATGAGTCCGTA
GCACTCCGAGAAGCGATTAGGGAATACGATGCGAATAAATGGAAGGCGAT
TGGACTGAAAGTTGGAAAGCCAGCCAAGGCGTGCGAACAGTATGCAAAAG
AACATTTCAAGGATCTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR017877 |
| DBxref | InterPro:IPR017930 |
| DBxref | InterPro:IPR001005 |
| DBxref | PFAM:PF13921 |
| DBxref | PFAM:PF00249 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:1580107..1580751 + |
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