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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:1599923..1600746+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004715-T1 ID=CBS51388_004715-T1|Name=CBS51388_004715-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=824bp|location=Sequence derived from alignment at An07:1599923..1600746+ (Aspergillus niger CBS 513.88)
ATGGCGAACAACAGACTCCAATACGTGAGTATAATTGAATCTCTGAATAT
TAAATGAAATGGAATACTGATCTATTGTTCTTTTTCTCTGCAGCGCCGCC
GGAACCCGTACGTTTGAATTTTCCCTCTGTTTCTACCCCCATCGTGCCTT
TGTCACTCCCACCAAAATTTTTGTTATCGGTCGCTACAGTGCAATAACGA
TTTGTCCGATTTCGACGCGATGAACCGCTGCTTTGCTCTTGAAATTTTAT
ATACGCCGAGATATCTATGAATAGGGTATTGATGGATTTTGTTCTTCAGG
TACAACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGA
GCTCCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTG
ACTGTGGCATCAAGCTCCCTGGTGTGAGTGCTCCCGAATGATTCATGTTG
AATGGTGGTGGTGTGTGAACGGGCTGCAGGATGGATGAAGGGTGGAGTGT
GTGTGCGTGGGCGATCGCTTCGACCAACGCACAAGGAAACGACAATATTC
AACACCACCACCACCATTCGCGATACAAAGGATAGGAAGGAAGAGCAAAA
AATGGCTGATGGTCATCTTTCCACCGATATAGGTCCCCGCCCTCCGCCCC
CGCGAGTACGCTCAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTA
CGGTGGTTCCCGCTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTT
TCCTGATTGAGGAGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAG
GAGAAGGCTGCCGGCAAGCGCTAA back to topCoding sequence (CDS) from alignment at An07:1599923..1600746+ >CBS51388_004715-T1 ID=CBS51388_004715-T1|Name=CBS51388_004715-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1416bp|location=Sequence derived from alignment at An07:1599923..1600746+ (Aspergillus niger CBS 513.88)
ATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTACAACACGCG
GTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCTCCGTTACC
TTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACTGTGGCATC
AAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCTCAGATCTC
CCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCGCTGCGCTG
GTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGGAGCAGAAG
ATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCCGGCAAGCG
CTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTACAACA
CGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCTCCGT
TACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACTGTGG
CATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCTCAGA
TCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCGCTGC
GCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGGAGCA
GAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCCGGCA
AGCGCTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTAC
AACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCT
CCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACT
GTGGCATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCT
CAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCG
CTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGG
AGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCC
GGCAAGCGCTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCC
GTACAACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTG
AGCTCCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGT
GACTGTGGCATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTA
CGCTCAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTT
CCCGCTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATT
GAGGAGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGC
TGCCGGCAAGCGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018065 |
| DBxref | InterPro:IPR038562 |
| DBxref | InterPro:IPR008195 |
| DBxref | PFAM:PF01199 |
| Product | 60S ribosomal protein L34A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:1599923..1600746 + |
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