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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:1607246..1608478- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004716-T1 ID=CBS51388_004716-T1|Name=CBS51388_004716-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1233bp|location=Sequence derived from alignment at An07:1607246..1608478- (Aspergillus niger CBS 513.88)
ATGGCACTGCCCCCATCACTACCAGCTCCGAATTCTCTACCGGAACGAGG
GTTGCCTCGCTTACTTCCATCTCATCGCCTTGAGACACCTGCCACACCGT
CCTCGTTGGCGGCAGCTGGTGGCCCCAGGATGAGGCAACTTAAGCCCGAA
CTACGGCGCCTTGAGGACAGAAGAGCACCATCAGACTGGCTACGTGAGCC
AGGATCCATCTCATCATGCTCGCATGAGTCTACTTCTTATCGCACACCGT
CGGGGATGTCACGGTCAGATGCTTGTGAAACGGCTTGTCCTACAGCGAGC
TTGCCACCACCGTCACCGGCAATCTCGGCGCTAACCTACCCTTCGCTGAA
GCTGGAAACGCCGGACTCTCCCGACAGTATTGATGATAAACCGTATTCTA
AGCTTATCGAAATGGCCCTCAAGACCAATCCGGAAATGAAGCTGTCCCTT
CAAGGGATTTACAACTGGTTTGAACAAAACACAGCAAAGGGGAGAGATCT
CAGCTCGAAAGGCTGGCAAAACAGTGTACGGCACAACTTGTCTATGAACG
CAGTGAGTCCGCCTGATCTTCCTCCTTTCCTTGCTTCATTATTGATCACT
GGATACTAAGAACACATTACTATACTATAGGGCTTTGAGGCAGTCCGGGA
AGAACCGATACCCGGAAAGAAAGCTGTGAATTACTGGCGCTTAACGACTG
AAGCCATCAAGAATGGCGTCCAATCCACCACCCGGTACAGGAAGCAGGCG
AGTTACAGAAAAGCCTCGAGCTCGGATCCACCGGCGCCTCAACGCCAGCG
ATCCGGGGCCAAGGGAGGGAAAGCTACTAAAATCAAGTCAAAAGTTCGTG
GGCGGATGAGCGAGGACGAGTTGCCCAAAGGCAGGTACCACCCACGAGTG
ACATCACGACCGCGACCGACGAAGAATGTGTTCACTCATTACAATACGAC
AGCGGGAGCGTTGATGGGGATTACAGTCATGTCACCTTTCCATGTCTCCG
GACTGACCACGTCGGGGACTCGCTTATCCAACGAGCCATTCGATTTGGGG
AGCGTTGTTGGCTGCGCAGATCCCGCTCCATGTCCTCCCCTTTTTTGCGA
CATGGCGGGACCAGGGCCCGACTGTGTTGCGTTGGACTCAGGCTTTCTCG
GCTGGGGAGCAGCCGTCCACTCGTTTCCTACTGGCTTGCTGGCTGGCCCC
GGAATCTCCACGGATCTCCAGATGGGAGTATAG back to topCoding sequence (CDS) from alignment at An07:1607246..1608478- >CBS51388_004716-T1 ID=CBS51388_004716-T1|Name=CBS51388_004716-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2310bp|location=Sequence derived from alignment at An07:1607246..1608478- (Aspergillus niger CBS 513.88)
GGCTTTGAGGCAGTCCGGGAAGAACCGATACCCGGAAAGAAAGCTGTGAA
TTACTGGCGCTTAACGACTGAAGCCATCAAGAATGGCGTCCAATCCACCA
CCCGGTACAGGAAGCAGGCGAGTTACAGAAAAGCCTCGAGCTCGGATCCA
CCGGCGCCTCAACGCCAGCGATCCGGGGCCAAGGGAGGGAAAGCTACTAA
AATCAAGTCAAAAGTTCGTGGGCGGATGAGCGAGGACGAGTTGCCCAAAG
GCAGGTACCACCCACGAGTGACATCACGACCGCGACCGACGAAGAATGTG
TTCACTCATTACAATACGACAGCGGGAGCGTTGATGGGGATTACAGTCAT
GTCACCTTTCCATGTCTCCGGACTGACCACGTCGGGGACTCGCTTATCCA
ACGAGCCATTCGATTTGGGGAGCGTTGTTGGCTGCGCAGATCCCGCTCCA
TGTCCTCCCCTTTTTTGCGACATGGCGGGACCAGGGCCCGACTGTGTTGC
GTTGGACTCAGGCTTTCTCGGCTGGGGAGCAGCCGTCCACTCGTTTCCTA
CTGGCTTGCTGGCTGGCCCCGGAATCTCCACGGATCTCCAGATGGGAGTA
TAGATGGCACTGCCCCCATCACTACCAGCTCCGAATTCTCTACCGGAACG
AGGGTTGCCTCGCTTACTTCCATCTCATCGCCTTGAGACACCTGCCACAC
CGTCCTCGTTGGCGGCAGCTGGTGGCCCCAGGATGAGGCAACTTAAGCCC
GAACTACGGCGCCTTGAGGACAGAAGAGCACCATCAGACTGGCTACGTGA
GCCAGGATCCATCTCATCATGCTCGCATGAGTCTACTTCTTATCGCACAC
CGTCGGGGATGTCACGGTCAGATGCTTGTGAAACGGCTTGTCCTACAGCG
AGCTTGCCACCACCGTCACCGGCAATCTCGGCGCTAACCTACCCTTCGCT
GAAGCTGGAAACGCCGGACTCTCCCGACAGTATTGATGATAAACCGTATT
CTAAGCTTATCGAAATGGCCCTCAAGACCAATCCGGAAATGAAGCTGTCC
CTTCAAGGGATTTACAACTGGTTTGAACAAAACACAGCAAAGGGGAGAGA
TCTCAGCTCGAAAGGCTGGCAAAACAGTGTACGGCACAACTTGTCTATGA
ACGCAGGCTTTGAGGCAGTCCGGGAAGAACCGATACCCGGAAAGAAAGCT
GTGAATTACTGGCGCTTAACGACTGAAGCCATCAAGAATGGCGTCCAATC
CACCACCCGGTACAGGAAGCAGGCGAGTTACAGAAAAGCCTCGAGCTCGG
ATCCACCGGCGCCTCAACGCCAGCGATCCGGGGCCAAGGGAGGGAAAGCT
ACTAAAATCAAGTCAAAAGTTCGTGGGCGGATGAGCGAGGACGAGTTGCC
CAAAGGCAGGTACCACCCACGAGTGACATCACGACCGCGACCGACGAAGA
ATGTGTTCACTCATTACAATACGACAGCGGGAGCGTTGATGGGGATTACA
GTCATGTCACCTTTCCATGTCTCCGGACTGACCACGTCGGGGACTCGCTT
ATCCAACGAGCCATTCGATTTGGGGAGCGTTGTTGGCTGCGCAGATCCCG
CTCCATGTCCTCCCCTTTTTTGCGACATGGCGGGACCAGGGCCCGACTGT
GTTGCGTTGGACTCAGGCTTTCTCGGCTGGGGAGCAGCCGTCCACTCGTT
TCCTACTGGCTTGCTGGCTGGCCCCGGAATCTCCACGGATCTCCAGATGG
GAGTATAGATGGCACTGCCCCCATCACTACCAGCTCCGAATTCTCTACCG
GAACGAGGGTTGCCTCGCTTACTTCCATCTCATCGCCTTGAGACACCTGC
CACACCGTCCTCGTTGGCGGCAGCTGGTGGCCCCAGGATGAGGCAACTTA
AGCCCGAACTACGGCGCCTTGAGGACAGAAGAGCACCATCAGACTGGCTA
CGTGAGCCAGGATCCATCTCATCATGCTCGCATGAGTCTACTTCTTATCG
CACACCGTCGGGGATGTCACGGTCAGATGCTTGTGAAACGGCTTGTCCTA
CAGCGAGCTTGCCACCACCGTCACCGGCAATCTCGGCGCTAACCTACCCT
TCGCTGAAGCTGGAAACGCCGGACTCTCCCGACAGTATTGATGATAAACC
GTATTCTAAGCTTATCGAAATGGCCCTCAAGACCAATCCGGAAATGAAGC
TGTCCCTTCAAGGGATTTACAACTGGTTTGAACAAAACACAGCAAAGGGG
AGAGATCTCAGCTCGAAAGGCTGGCAAAACAGTGTACGGCACAACTTGTC
TATGAACGCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
| GO:0043565 | sequence-specific DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR030456 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR001766 |
| DBxref | PFAM:PF00250 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:1607246..1608478 - |
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