CBS51388_004718-T1, CBS51388_004718-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_004718-T1
Unique Name	CBS51388_004718-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An07:1612685..1614456+
coding sequence from alignment at An07:1612685..1614456+

mRNA from alignment at An07:1612685..1614456+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_004718-T1 ID=CBS51388_004718-T1|Name=CBS51388_004718-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1772bp|location=Sequence derived from alignment at An07:1612685..1614456+ (Aspergillus niger CBS 513.88)
ATGTCTGCGCGGTGGCAGAAATTGCACATATCAAATCGTGCGCCTGCGCC
ACCTCTATTTTATAGATACACCCTTTTCAGAGATGGATATGAGCTGTACC
TAACCGATCTCACGTATATTTGGTCCGAGCGTCCCAACCGCCAGCATATT
CTGGGAAGAGCCGTTGAAGAGGATGCGACAATTGACCCCAGCCAAGATAT
AGATCAGTTCAATATACTTCTGGAGAAATTAGGGGAGGCCTTGCGCAATG
ACCCGGGTACCAGCACTGTACTAAGGCGTGGACGGGAGAATGATACTCTA
CACCTGACCACTACAACAAGCCTACCGGCCCCACTTGAGCCTCTGAAGTG
GAATTTCTACATGGCTAGAGAGAAACAGCGCTTTTCGACTACTCAACTGC
TTATCCCGCATATAAAGTCTGAGGCTGCCTGGGAGTTGCGCCAGCGGGAA
CTAATCGAAGTTGTTAAACGGAAGGATTGGCTGCTGTCAAAGCTACTCGA
TAAGCTTGAAGCCGTCGGGCTTGATCTCAGCACTATCTTCCCTAGTATTC
CTGGACTCAGGGCCAACCACAAGGGCTCAACACAGTCACAGGCCGCCAAG
TATGTTAGTGGAGCGAGACCTTTCGATGAGGATGCCTGGCTTGAGGAGAA
CAACGCGATAACATCTGAGACCGGATTCGCATCCACCATTTTGGAAGAAA
CAGAAGATTCTACCCTTGATGATAATCTTCTGCTACTCGAAGATCTCAGC
GCGCCATCAGAAGGATGGTGGAGGAAGATGTCCACCGTTAACAATAACAC
CGAAGCCGTAGATGCCAGGACCCCGGAGGACTCGACGAACATGGACACTA
CGGACGGTGGTTTGGAGACTGAGGATGACTTTGACGATGATGATGACGAT
GATTTTGAGGTACGTACCTTTCCACGCAATGCAGTGCCTTGTATTCATAT
TTCGCATTTCAGCGACAAGAGACCCCCCCGAGACTCAGACCTCAGCCAAA
CCACCAAACTCCCCCTTCAGGGCCAGGCGAGGACACAGCAACAGAAAGTG
AAGATGACCTTGAAGATCGAAATGGGGGACCAAGTACAGCGAAGTCTCCG
GCATCACGAAACACTTCCAGGGGCCTTGGAACAATCGGAGGCAACAGAAA
ACAGCCCCCACAACCAGAATCGCCTCAAACATCACCAGCATTAGCAGATG
TCGACGCAGCGATACCAAGACGCAAGACCCCCACAACCCAAGCAGACAGC
GACCAAACAGCCTCCGAGACAGACGACGACCACGACGACAATCATCCCTC
CCCATCACCCTCACCGCCGCCCTCAAACCGTCAAACAAAGCCCCGCAAAA
TAGGTATGATAGGTGGCAAGAAAGCCGAAAAACAAGCCTCCCCACCAGCG
TCACCAAATCCCGAATCATCCAGTAAACTCCAGTCAAAACCCCGCGGGAT
TGGCGTCATAGGTGGTAAGGGCAAAGCAAGGCAAGCTTCCCCACCATCAT
CACCGCCACCAGAAGCCGAATCATCGACCAAGGCCCACAGACTAGGAGTG
ATAGGCGGCCGGAAGAGAGAAAAACAAGCCGCGTCGTCGCCAGCAGCTAC
AGCAACGCAGTCCTCAGGGCCACCATCCCCTGCACCAGCTCTGGACGAAC
AACCCGCAGAGCCGGAGAAGGAAGAAACAGAGGAAGAAAAAGCGGACAGG
AAGCGGGAAGAGCTGAAGAGACAGCTTGAAGCTAAGAGCAAGGCGCCTGC
TAAGAAGAAGCGGAAGTTTTAA

Coding sequence (CDS) from alignment at An07:1612685..1614456+

>CBS51388_004718-T1 ID=CBS51388_004718-T1|Name=CBS51388_004718-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3438bp|location=Sequence derived from alignment at An07:1612685..1614456+ (Aspergillus niger CBS 513.88)
ATGTCTGCGCGGTGGCAGAAATTGCACATATCAAATCGTGCGCCTGCGCC
ACCTCTATTTTATAGATACACCCTTTTCAGAGATGGATATGAGCTGTACC
TAACCGATCTCACGTATATTTGGTCCGAGCGTCCCAACCGCCAGCATATT
CTGGGAAGAGCCGTTGAAGAGGATGCGACAATTGACCCCAGCCAAGATAT
AGATCAGTTCAATATACTTCTGGAGAAATTAGGGGAGGCCTTGCGCAATG
ACCCGGGTACCAGCACTGTACTAAGGCGTGGACGGGAGAATGATACTCTA
CACCTGACCACTACAACAAGCCTACCGGCCCCACTTGAGCCTCTGAAGTG
GAATTTCTACATGGCTAGAGAGAAACAGCGCTTTTCGACTACTCAACTGC
TTATCCCGCATATAAAGTCTGAGGCTGCCTGGGAGTTGCGCCAGCGGGAA
CTAATCGAAGTTGTTAAACGGAAGGATTGGCTGCTGTCAAAGCTACTCGA
TAAGCTTGAAGCCGTCGGGCTTGATCTCAGCACTATCTTCCCTAGTATTC
CTGGACTCAGGGCCAACCACAAGGGCTCAACACAGTCACAGGCCGCCAAG
TATGTTAGTGGAGCGAGACCTTTCGATGAGGATGCCTGGCTTGAGGAGAA
CAACGCGATAACATCTGAGACCGGATTCGCATCCACCATTTTGGAAGAAA
CAGAAGATTCTACCCTTGATGATAATCTTCTGCTACTCGAAGATCTCAGC
GCGCCATCAGAAGGATGGTGGAGGAAGATGTCCACCGTTAACAATAACAC
CGAAGCCGTAGATGCCAGGACCCCGGAGGACTCGACGAACATGGACACTA
CGGACGGTGGTTTGGAGACTGAGGATGACTTTGACGATGATGATGACGAT
GATTTTGAGCGACAAGAGACCCCCCCGAGACTCAGACCTCAGCCAAACCA
CCAAACTCCCCCTTCAGGGCCAGGCGAGGACACAGCAACAGAAAGTGAAG
ATGACCTTGAAGATCGAAATGGGGGACCAAGTACAGCGAAGTCTCCGGCA
TCACGAAACACTTCCAGGGGCCTTGGAACAATCGGAGGCAACAGAAAACA
GCCCCCACAACCAGAATCGCCTCAAACATCACCAGCATTAGCAGATGTCG
ACGCAGCGATACCAAGACGCAAGACCCCCACAACCCAAGCAGACAGCGAC
CAAACAGCCTCCGAGACAGACGACGACCACGACGACAATCATCCCTCCCC
ATCACCCTCACCGCCGCCCTCAAACCGTCAAACAAAGCCCCGCAAAATAG
GTATGATAGGTGGCAAGAAAGCCGAAAAACAAGCCTCCCCACCAGCGTCA
CCAAATCCCGAATCATCCAGTAAACTCCAGTCAAAACCCCGCGGGATTGG
CGTCATAGGTGGTAAGGGCAAAGCAAGGCAAGCTTCCCCACCATCATCAC
CGCCACCAGAAGCCGAATCATCGACCAAGGCCCACAGACTAGGAGTGATA
GGCGGCCGGAAGAGAGAAAAACAAGCCGCGTCGTCGCCAGCAGCTACAGC
AACGCAGTCCTCAGGGCCACCATCCCCTGCACCAGCTCTGGACGAACAAC
CCGCAGAGCCGGAGAAGGAAGAAACAGAGGAAGAAAAAGCGGACAGGAAG
CGGGAAGAGCTGAAGAGACAGCTTGAAGCTAAGAGCAAGGCGCCTGCTAA
GAAGAAGCGGAAGTTTTAAATGTCTGCGCGGTGGCAGAAATTGCACATAT
CAAATCGTGCGCCTGCGCCACCTCTATTTTATAGATACACCCTTTTCAGA
GATGGATATGAGCTGTACCTAACCGATCTCACGTATATTTGGTCCGAGCG
TCCCAACCGCCAGCATATTCTGGGAAGAGCCGTTGAAGAGGATGCGACAA
TTGACCCCAGCCAAGATATAGATCAGTTCAATATACTTCTGGAGAAATTA
GGGGAGGCCTTGCGCAATGACCCGGGTACCAGCACTGTACTAAGGCGTGG
ACGGGAGAATGATACTCTACACCTGACCACTACAACAAGCCTACCGGCCC
CACTTGAGCCTCTGAAGTGGAATTTCTACATGGCTAGAGAGAAACAGCGC
TTTTCGACTACTCAACTGCTTATCCCGCATATAAAGTCTGAGGCTGCCTG
GGAGTTGCGCCAGCGGGAACTAATCGAAGTTGTTAAACGGAAGGATTGGC
TGCTGTCAAAGCTACTCGATAAGCTTGAAGCCGTCGGGCTTGATCTCAGC
ACTATCTTCCCTAGTATTCCTGGACTCAGGGCCAACCACAAGGGCTCAAC
ACAGTCACAGGCCGCCAAGTATGTTAGTGGAGCGAGACCTTTCGATGAGG
ATGCCTGGCTTGAGGAGAACAACGCGATAACATCTGAGACCGGATTCGCA
TCCACCATTTTGGAAGAAACAGAAGATTCTACCCTTGATGATAATCTTCT
GCTACTCGAAGATCTCAGCGCGCCATCAGAAGGATGGTGGAGGAAGATGT
CCACCGTTAACAATAACACCGAAGCCGTAGATGCCAGGACCCCGGAGGAC
TCGACGAACATGGACACTACGGACGGTGGTTTGGAGACTGAGGATGACTT
TGACGATGATGATGACGATGATTTTGAGCGACAAGAGACCCCCCCGAGAC
TCAGACCTCAGCCAAACCACCAAACTCCCCCTTCAGGGCCAGGCGAGGAC
ACAGCAACAGAAAGTGAAGATGACCTTGAAGATCGAAATGGGGGACCAAG
TACAGCGAAGTCTCCGGCATCACGAAACACTTCCAGGGGCCTTGGAACAA
TCGGAGGCAACAGAAAACAGCCCCCACAACCAGAATCGCCTCAAACATCA
CCAGCATTAGCAGATGTCGACGCAGCGATACCAAGACGCAAGACCCCCAC
AACCCAAGCAGACAGCGACCAAACAGCCTCCGAGACAGACGACGACCACG
ACGACAATCATCCCTCCCCATCACCCTCACCGCCGCCCTCAAACCGTCAA
ACAAAGCCCCGCAAAATAGGTATGATAGGTGGCAAGAAAGCCGAAAAACA
AGCCTCCCCACCAGCGTCACCAAATCCCGAATCATCCAGTAAACTCCAGT
CAAAACCCCGCGGGATTGGCGTCATAGGTGGTAAGGGCAAAGCAAGGCAA
GCTTCCCCACCATCATCACCGCCACCAGAAGCCGAATCATCGACCAAGGC
CCACAGACTAGGAGTGATAGGCGGCCGGAAGAGAGAAAAACAAGCCGCGT
CGTCGCCAGCAGCTACAGCAACGCAGTCCTCAGGGCCACCATCCCCTGCA
CCAGCTCTGGACGAACAACCCGCAGAGCCGGAGAAGGAAGAAACAGAGGA
AGAAAAAGCGGACAGGAAGCGGGAAGAGCTGAAGAGACAGCTTGAAGCTA
AGAGCAAGGCGCCTGCTAAGAAGAAGCGGAAGTTTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006302	double-strand break repair

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_004718	CBS51388_004718	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_004718-T1.exon1	CBS51388_004718-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_004718-T1.exon2	CBS51388_004718-T1.exon2	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_004718-T1.cds	CBS51388_004718-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_004718-T1	CBS51388_004718-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR015381
DBxref	PFAM:PF09302
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An07	supercontig	An07:1612685..1614456 +

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CBS51388_004718-T1, CBS51388_004718-T1 (mRNA) Aspergillus niger CBS 513.88

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CBS51388_004718-T1, CBS51388_004718-T1 (mRNA) Aspergillus niger CBS 513.88