You are here

Home

CBS51388_004723-T1, CBS51388_004723-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004723-T1
Unique NameCBS51388_004723-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1631962..1633363-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004723-T1 ID=CBS51388_004723-T1|Name=CBS51388_004723-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1402bp|location=Sequence derived from alignment at An07:1631962..1633363- (Aspergillus niger CBS 513.88)
ATGGTGCGGTACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTTC
CGTCTGGGCTACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGCC
CCGAAGAGTATCCTTGCTGCTCTCGTGCGTTGGTCCCTTTTCTAATATAG
CCCTATGTGGTATTACCCTCATCCGCTAATGCTTGTTTAGAATATGGACA
GTGCGGTACTGGTGCTTACTGCTTGGGTGGTTGCGACCCCATCTCGTCAT
ACTCTCTAGACTCTTGCGTTGGTGAGCCCGTGTGTGAGAGCAAGACCTAC
AAGTGGGACTCTCTCGATAGTGCCGCGCTGAACACCAAATACCTCGGAAA
TGCGTCCGAATACGACTGGGTCTACAGCGGCTACCCCAAGTTGGACGATG
GTAATCTTCTCCTCACGATGCCCAAGAACACCGTCGGTACGCTCTTTGCG
AACAACCACTACGTCTGGTACGGCAAGATTTCCGGCAAAGTCAAGAGCAG
CCGTGGTGCCGGTGTCGTCACGGCTTTTATCCTGCTTTCGGACGTCAAGG
ACGAGATCGACTTTGAGTGGATTGGTGCGGATCTGGTCAATGTCCAGACC
AACTATTACTGGCAGGGTGTTCTGAACTGTAAGCCTAACATCGTCCCGAA
GGCAATGCCCCAAACACGCTGCTAACATGCCTTGTGCAGACAACAACGGC
GATAAGGATGCAGTCAATGGAAGTGATACATTCGATGATTGGCATGAGTA
TGAGATCGACTGGAAGGAAGATGCGATTACCTGGTCGGTGGATGGTGAGG
TGAAGCGGACTCTCACCAAGGAATCGACCTGGAACGAAACTGCGAAGCGC
TACCAATACCCCCAGTCCCCATCCAGAATGCAGCTTTCCCTGTGGCCCGC
CGGCCAAGCCAGCAACGCACCAGGAACCATTGAGTGGGCGGGTGGCGAAA
TCGATTGGGACAGCCAGGACATTAAAGACAAGGGTTACTACTATGCCACG
TTTGGCGAGATCACTGTTCAGTGCTACGATGCCCCGAATGGCACTGTTTC
GAACGGAAACAAGTCGTACATGTTCACCAACAAGGATGGGCTACAGCAAT
CGGTTCAGATCACCAACAATGACACCGTTCTTGCATCTTTTGGCGCCACC
GGTCTCGACATGGATCTTGGTGCCAGCGACTCCAGCAGCAGTAACGGAAC
TAACGGCACGGTTCCGGAGAACCAGGGAGGATCAGGAAACGTACCCGGCA
GCAGCACCTCGAGTGGCAGCTCCAGTACCTCTTCTGGATTCAGCCAGGGC
AGCAGCACCGACACGAGTGGTGCTCCCTCCCAGAATGAGCGAGTCATGAG
AGGCTCATTCTTTGCTGCCTTGGTCGCAGTTGTCGTTCTGGTCGCTTTCT
AA
back to top

Coding sequence (CDS) from alignment at An07:1631962..1633363-

>CBS51388_004723-T1 ID=CBS51388_004723-T1|Name=CBS51388_004723-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3825bp|location=Sequence derived from alignment at An07:1631962..1633363- (Aspergillus niger CBS 513.88)
ACAACAACGGCGATAAGGATGCAGTCAATGGAAGTGATACATTCGATGAT
TGGCATGAGTATGAGATCGACTGGAAGGAAGATGCGATTACCTGGTCGGT
GGATGGTGAGGTGAAGCGGACTCTCACCAAGGAATCGACCTGGAACGAAA
CTGCGAAGCGCTACCAATACCCCCAGTCCCCATCCAGAATGCAGCTTTCC
CTGTGGCCCGCCGGCCAAGCCAGCAACGCACCAGGAACCATTGAGTGGGC
GGGTGGCGAAATCGATTGGGACAGCCAGGACATTAAAGACAAGGGTTACT
ACTATGCCACGTTTGGCGAGATCACTGTTCAGTGCTACGATGCCCCGAAT
GGCACTGTTTCGAACGGAAACAAGTCGTACATGTTCACCAACAAGGATGG
GCTACAGCAATCGGTTCAGATCACCAACAATGACACCGTTCTTGCATCTT
TTGGCGCCACCGGTCTCGACATGGATCTTGGTGCCAGCGACTCCAGCAGC
AGTAACGGAACTAACGGCACGGTTCCGGAGAACCAGGGAGGATCAGGAAA
CGTACCCGGCAGCAGCACCTCGAGTGGCAGCTCCAGTACCTCTTCTGGAT
TCAGCCAGGGCAGCAGCACCGACACGAGTGGTGCTCCCTCCCAGAATGAG
CGAGTCATGAGAGGCTCATTCTTTGCTGCCTTGGTCGCAGTTGTCGTTCT
GGTCGCTTTCTAAAATATGGACAGTGCGGTACTGGTGCTTACTGCTTGGG
TGGTTGCGACCCCATCTCGTCATACTCTCTAGACTCTTGCGTTGGTGAGC
CCGTGTGTGAGAGCAAGACCTACAAGTGGGACTCTCTCGATAGTGCCGCG
CTGAACACCAAATACCTCGGAAATGCGTCCGAATACGACTGGGTCTACAG
CGGCTACCCCAAGTTGGACGATGGTAATCTTCTCCTCACGATGCCCAAGA
ACACCGTCGGTACGCTCTTTGCGAACAACCACTACGTCTGGTACGGCAAG
ATTTCCGGCAAAGTCAAGAGCAGCCGTGGTGCCGGTGTCGTCACGGCTTT
TATCCTGCTTTCGGACGTCAAGGACGAGATCGACTTTGAGTGGATTGGTG
CGGATCTGGTCAATGTCCAGACCAACTATTACTGGCAGGGTGTTCTGAAC
TATGGTGCGGTACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTT
CCGTCTGGGCTACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGC
CCCGAAGAGTATCCTTGCTGCTCTCACAACAACGGCGATAAGGATGCAGT
CAATGGAAGTGATACATTCGATGATTGGCATGAGTATGAGATCGACTGGA
AGGAAGATGCGATTACCTGGTCGGTGGATGGTGAGGTGAAGCGGACTCTC
ACCAAGGAATCGACCTGGAACGAAACTGCGAAGCGCTACCAATACCCCCA
GTCCCCATCCAGAATGCAGCTTTCCCTGTGGCCCGCCGGCCAAGCCAGCA
ACGCACCAGGAACCATTGAGTGGGCGGGTGGCGAAATCGATTGGGACAGC
CAGGACATTAAAGACAAGGGTTACTACTATGCCACGTTTGGCGAGATCAC
TGTTCAGTGCTACGATGCCCCGAATGGCACTGTTTCGAACGGAAACAAGT
CGTACATGTTCACCAACAAGGATGGGCTACAGCAATCGGTTCAGATCACC
AACAATGACACCGTTCTTGCATCTTTTGGCGCCACCGGTCTCGACATGGA
TCTTGGTGCCAGCGACTCCAGCAGCAGTAACGGAACTAACGGCACGGTTC
CGGAGAACCAGGGAGGATCAGGAAACGTACCCGGCAGCAGCACCTCGAGT
GGCAGCTCCAGTACCTCTTCTGGATTCAGCCAGGGCAGCAGCACCGACAC
GAGTGGTGCTCCCTCCCAGAATGAGCGAGTCATGAGAGGCTCATTCTTTG
CTGCCTTGGTCGCAGTTGTCGTTCTGGTCGCTTTCTAAAATATGGACAGT
GCGGTACTGGTGCTTACTGCTTGGGTGGTTGCGACCCCATCTCGTCATAC
TCTCTAGACTCTTGCGTTGGTGAGCCCGTGTGTGAGAGCAAGACCTACAA
GTGGGACTCTCTCGATAGTGCCGCGCTGAACACCAAATACCTCGGAAATG
CGTCCGAATACGACTGGGTCTACAGCGGCTACCCCAAGTTGGACGATGGT
AATCTTCTCCTCACGATGCCCAAGAACACCGTCGGTACGCTCTTTGCGAA
CAACCACTACGTCTGGTACGGCAAGATTTCCGGCAAAGTCAAGAGCAGCC
GTGGTGCCGGTGTCGTCACGGCTTTTATCCTGCTTTCGGACGTCAAGGAC
GAGATCGACTTTGAGTGGATTGGTGCGGATCTGGTCAATGTCCAGACCAA
CTATTACTGGCAGGGTGTTCTGAACTATGGTGCGGTACACTTCTTCCATT
CTCTTGGCCTCGTTGGCCGCCACTTCCGTCTGGGCTACCTCGTCCCCTCC
TTCATGCAGTACCAGCTCTCAGTGCCCCGAAGAGTATCCTTGCTGCTCTC
ACAACAACGGCGATAAGGATGCAGTCAATGGAAGTGATACATTCGATGAT
TGGCATGAGTATGAGATCGACTGGAAGGAAGATGCGATTACCTGGTCGGT
GGATGGTGAGGTGAAGCGGACTCTCACCAAGGAATCGACCTGGAACGAAA
CTGCGAAGCGCTACCAATACCCCCAGTCCCCATCCAGAATGCAGCTTTCC
CTGTGGCCCGCCGGCCAAGCCAGCAACGCACCAGGAACCATTGAGTGGGC
GGGTGGCGAAATCGATTGGGACAGCCAGGACATTAAAGACAAGGGTTACT
ACTATGCCACGTTTGGCGAGATCACTGTTCAGTGCTACGATGCCCCGAAT
GGCACTGTTTCGAACGGAAACAAGTCGTACATGTTCACCAACAAGGATGG
GCTACAGCAATCGGTTCAGATCACCAACAATGACACCGTTCTTGCATCTT
TTGGCGCCACCGGTCTCGACATGGATCTTGGTGCCAGCGACTCCAGCAGC
AGTAACGGAACTAACGGCACGGTTCCGGAGAACCAGGGAGGATCAGGAAA
CGTACCCGGCAGCAGCACCTCGAGTGGCAGCTCCAGTACCTCTTCTGGAT
TCAGCCAGGGCAGCAGCACCGACACGAGTGGTGCTCCCTCCCAGAATGAG
CGAGTCATGAGAGGCTCATTCTTTGCTGCCTTGGTCGCAGTTGTCGTTCT
GGTCGCTTTCTAAAATATGGACAGTGCGGTACTGGTGCTTACTGCTTGGG
TGGTTGCGACCCCATCTCGTCATACTCTCTAGACTCTTGCGTTGGTGAGC
CCGTGTGTGAGAGCAAGACCTACAAGTGGGACTCTCTCGATAGTGCCGCG
CTGAACACCAAATACCTCGGAAATGCGTCCGAATACGACTGGGTCTACAG
CGGCTACCCCAAGTTGGACGATGGTAATCTTCTCCTCACGATGCCCAAGA
ACACCGTCGGTACGCTCTTTGCGAACAACCACTACGTCTGGTACGGCAAG
ATTTCCGGCAAAGTCAAGAGCAGCCGTGGTGCCGGTGTCGTCACGGCTTT
TATCCTGCTTTCGGACGTCAAGGACGAGATCGACTTTGAGTGGATTGGTG
CGGATCTGGTCAATGTCCAGACCAACTATTACTGGCAGGGTGTTCTGAAC
TATGGTGCGGTACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTT
CCGTCTGGGCTACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGC
CCCGAAGAGTATCCTTGCTGCTCTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0071555cell wall organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRF2CBS51388_004723Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004723-T1CBS51388_004723-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004723-T1.cdsCBS51388_004723-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004723-T1.exon3CBS51388_004723-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004723-T1.exon2CBS51388_004723-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004723-T1.exon1CBS51388_004723-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH16
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
DBxrefInterPro:IPR017168
DBxrefPFAM:PF00722
ProductPutative glycosidase crf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1631962..1633363 -
Powered by Drupal