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CBS51388_004731-T1, CBS51388_004731-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004731-T1
Unique NameCBS51388_004731-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1656634..1658568+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004731-T1 ID=CBS51388_004731-T1|Name=CBS51388_004731-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1935bp|location=Sequence derived from alignment at An07:1656634..1658568+ (Aspergillus niger CBS 513.88)
ATGCAGTCATGCGTCAAACATTATGTCGGCTATGAGCAGGCTACCGGCCA
AAACCCAACTACGAACGCGGACGGAGTAGTCATTGAGGGTTATTCATCGA
ATATTGATGACCGCACCATGCATGAAATATACTCGTGGCCCTTTGCAAAA
GCAGTAAGGGCTGGGGTATCATCGGTTATGTGCGCCTATTCAAGAATCAA
TGGCTCATACGCCTGTGAAAACCCCAAAACTCTCGACGGGATCTTGAAGG
AGGAGCTTGGCTTCCCAGGCTATGTTATGAGCGATTGGGGTGCGACTATG
TCGGGCGTCCAAGCCATCGAAAGCGGCTTAGACATGACCATGCCAGGCGC
ATTAATGGGCTCTGGCCGTACAACTTGGGGCTTCTCATTATTTGGCGGCA
ACCTCACTCAAGCGGTGGAGAATGGAACCTTGTCCATGTCACGCGTTAAC
GACATGGTGCTCCGAGTAATGACTCCTTACTTTTATCTGAACCAGGATGA
TAAGCACTGGCCGCTCATTGATCCAAGCTCTCAGGAACTGGGTGATTTCT
CTGACAGCATGGCAAACTACTCCTGGCCAGTTGGCGGGGAAGCGCATCGG
GACGTGCGTGGGAACAATGCAGCCTTCATTCGGAAGCTTGGAGCGGAGTC
AGTGACTCTGCTCAAGAATAAAAATAGTGCTCTGCCGATTAAAGAAATCC
CTCGCTACATTGGGGTCTTTGGTAACGATGCAGCTGACAAGTCGGCCGGT
CTGGCATCCAGCCCCGACTCCGAAGCCATCGGCACGTTTGCGACTGGTGG
TGGAAGTGGCTCAGGACGGCTCACTTACATCGTGTCTCCCTTGGAGGCAA
TCAAGTCCTGGGCCAAAGGGAGATCAAATTCCTTGGTCCAGTATCTGACC
GACAATGAGTTGACCCCCGGCCTTCTTCACCCAACCAATGTGGGCTTTGG
CGACTCCATCTACCCCATTCCAGAAGTATGTTTCGTCTTCCTTCGATACT
ACGTATCTGAAGGGCCGGATCACAGTGATTTCGATTTAGATAACAATGGA
AGTTCAGTTGTGAACTCCGTGGCTTCTATCTGCAATAACACAATCGTGGT
TACCCACTCTGGAAACGTGAACCTGATGGACTGGGCAGATCATCCCAATG
TCACAGCCATCGTAAGGAAGCCCTCTATTCTCTGAGAAAGGCCTTGCGCA
ATTACTGACAATGAACCTTTCTTATACAATTAGATGATGGCCTACATGCC
CGGTCAAGAATCCGGAAATGCTATTCTAGACGTAATCACCGGCAAAGTCA
ACCCCAGCGGCAAACTGCCATTTACAGTCGCTTACAACGCCAGCGATTAC
AACACAGCTTCCGTGAACTTCACAGCCATGAACATCACAAATTCGAATGG
ACGGCAGATCAATTTCACAGAAGGGCAATTTATCGACTACCGCCATTTCG
ACAAGGCAGGAATCACTCCGAGGTACGAATTCGGGTACGGCCTATCCTAC
ACAACATTCTCCATCCAGGAACTGTCCCTCGAGCCCACGAACAAAGGGAA
TGTGGCCTCGCTTCCCGATAACAGCAGAGCTATACAGCCTGGCGGACACC
CAGACCTCTATGAAATCCTCATAACCGTTGAGTCCAATGTAACCAATACT
GGAGCGTTGGCGGGCGCAACGGTACCTCAACTATATCTTGCCTTCCCGCA
AGACACGACTCCTCCTGGAACCCCGGTCAAGGTGCTTCGAGGCTTTGACA
AGATATATCTCGAAGCTGGATGTAGTCGAACGGTGACATTTGAGCTAACC
CGCAAGGATGTGAGCTTTTGGAATGTAGTGAAGCAACAGTGGGAGATCCC
CGCTGGTACCTTTGAGGCTATGGTTGGGTTGAGCAGTCGGAAGATCTCGG
TCAAGAAGCAGTTTGATGTGCTTAGACGTCGGTGA
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Coding sequence (CDS) from alignment at An07:1656634..1658568+

>CBS51388_004731-T1 ID=CBS51388_004731-T1|Name=CBS51388_004731-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3726bp|location=Sequence derived from alignment at An07:1656634..1658568+ (Aspergillus niger CBS 513.88)
ATGCAGTCATGCGTCAAACATTATGTCGGCTATGAGCAGGCTACCGGCCA
AAACCCAACTACGAACGCGGACGGAGTAGTCATTGAGGGTTATTCATCGA
ATATTGATGACCGCACCATGCATGAAATATACTCGTGGCCCTTTGCAAAA
GCAGTAAGGGCTGGGGTATCATCGGTTATGTGCGCCTATTCAAGAATCAA
TGGCTCATACGCCTGTGAAAACCCCAAAACTCTCGACGGGATCTTGAAGG
AGGAGCTTGGCTTCCCAGGCTATGTTATGAGCGATTGGGGTGCGACTATG
TCGGGCGTCCAAGCCATCGAAAGCGGCTTAGACATGACCATGCCAGGCGC
ATTAATGGGCTCTGGCCGTACAACTTGGGGCTTCTCATTATTTGGCGGCA
ACCTCACTCAAGCGGTGGAGAATGGAACCTTGTCCATGTCACGCGTTAAC
GACATGGTGCTCCGAGTAATGACTCCTTACTTTTATCTGAACCAGGATGA
TAAGCACTGGCCGCTCATTGATCCAAGCTCTCAGGAACTGGGTGATTTCT
CTGACAGCATGGCAAACTACTCCTGGCCAGTTGGCGGGGAAGCGCATCGG
GACGTGCGTGGGAACAATGCAGCCTTCATTCGGAAGCTTGGAGCGGAGTC
AGTGACTCTGCTCAAGAATAAAAATAGTGCTCTGCCGATTAAAGAAATCC
CTCGCTACATTGGGGTCTTTGGTAACGATGCAGCTGACAAGTCGGCCGGT
CTGGCATCCAGCCCCGACTCCGAAGCCATCGGCACGTTTGCGACTGGTGG
TGGAAGTGGCTCAGGACGGCTCACTTACATCGTGTCTCCCTTGGAGGCAA
TCAAGTCCTGGGCCAAAGGGAGATCAAATTCCTTGGTCCAGTATCTGACC
GACAATGAGTTGACCCCCGGCCTTCTTCACCCAACCAATGTGGGCTTTGG
CGACTCCATCTACCCCATTCCAGAAGTATGTTTCGTCTTCCTTCGATACT
ACGTATCTGAAGGGCCGGATCACAGTGATTTCGATTTAGATAACAATGGA
AGTTCAGTTGTGAACTCCGTGGCTTCTATCTGCAATAACACAATCGTGGT
TACCCACTCTGGAAACGTGAACCTGATGGACTGGGCAGATCATCCCAATG
TCACAGCCATCATGATGGCCTACATGCCCGGTCAAGAATCCGGAAATGCT
ATTCTAGACGTAATCACCGGCAAAGTCAACCCCAGCGGCAAACTGCCATT
TACAGTCGCTTACAACGCCAGCGATTACAACACAGCTTCCGTGAACTTCA
CAGCCATGAACATCACAAATTCGAATGGACGGCAGATCAATTTCACAGAA
GGGCAATTTATCGACTACCGCCATTTCGACAAGGCAGGAATCACTCCGAG
GTACGAATTCGGGTACGGCCTATCCTACACAACATTCTCCATCCAGGAAC
TGTCCCTCGAGCCCACGAACAAAGGGAATGTGGCCTCGCTTCCCGATAAC
AGCAGAGCTATACAGCCTGGCGGACACCCAGACCTCTATGAAATCCTCAT
AACCGTTGAGTCCAATGTAACCAATACTGGAGCGTTGGCGGGCGCAACGG
TACCTCAACTATATCTTGCCTTCCCGCAAGACACGACTCCTCCTGGAACC
CCGGTCAAGGTGCTTCGAGGCTTTGACAAGATATATCTCGAAGCTGGATG
TAGTCGAACGGTGACATTTGAGCTAACCCGCAAGGATGTGAGCTTTTGGA
ATGTAGTGAAGCAACAGTGGGAGATCCCCGCTGGTACCTTTGAGGCTATG
GTTGGGTTGAGCAGTCGGAAGATCTCGGTCAAGAAGCAGTTTGATGTGCT
TAGACGTCGGTGAATGCAGTCATGCGTCAAACATTATGTCGGCTATGAGC
AGGCTACCGGCCAAAACCCAACTACGAACGCGGACGGAGTAGTCATTGAG
GGTTATTCATCGAATATTGATGACCGCACCATGCATGAAATATACTCGTG
GCCCTTTGCAAAAGCAGTAAGGGCTGGGGTATCATCGGTTATGTGCGCCT
ATTCAAGAATCAATGGCTCATACGCCTGTGAAAACCCCAAAACTCTCGAC
GGGATCTTGAAGGAGGAGCTTGGCTTCCCAGGCTATGTTATGAGCGATTG
GGGTGCGACTATGTCGGGCGTCCAAGCCATCGAAAGCGGCTTAGACATGA
CCATGCCAGGCGCATTAATGGGCTCTGGCCGTACAACTTGGGGCTTCTCA
TTATTTGGCGGCAACCTCACTCAAGCGGTGGAGAATGGAACCTTGTCCAT
GTCACGCGTTAACGACATGGTGCTCCGAGTAATGACTCCTTACTTTTATC
TGAACCAGGATGATAAGCACTGGCCGCTCATTGATCCAAGCTCTCAGGAA
CTGGGTGATTTCTCTGACAGCATGGCAAACTACTCCTGGCCAGTTGGCGG
GGAAGCGCATCGGGACGTGCGTGGGAACAATGCAGCCTTCATTCGGAAGC
TTGGAGCGGAGTCAGTGACTCTGCTCAAGAATAAAAATAGTGCTCTGCCG
ATTAAAGAAATCCCTCGCTACATTGGGGTCTTTGGTAACGATGCAGCTGA
CAAGTCGGCCGGTCTGGCATCCAGCCCCGACTCCGAAGCCATCGGCACGT
TTGCGACTGGTGGTGGAAGTGGCTCAGGACGGCTCACTTACATCGTGTCT
CCCTTGGAGGCAATCAAGTCCTGGGCCAAAGGGAGATCAAATTCCTTGGT
CCAGTATCTGACCGACAATGAGTTGACCCCCGGCCTTCTTCACCCAACCA
ATGTGGGCTTTGGCGACTCCATCTACCCCATTCCAGAAGTATGTTTCGTC
TTCCTTCGATACTACGTATCTGAAGGGCCGGATCACAGTGATTTCGATTT
AGATAACAATGGAAGTTCAGTTGTGAACTCCGTGGCTTCTATCTGCAATA
ACACAATCGTGGTTACCCACTCTGGAAACGTGAACCTGATGGACTGGGCA
GATCATCCCAATGTCACAGCCATCATGATGGCCTACATGCCCGGTCAAGA
ATCCGGAAATGCTATTCTAGACGTAATCACCGGCAAAGTCAACCCCAGCG
GCAAACTGCCATTTACAGTCGCTTACAACGCCAGCGATTACAACACAGCT
TCCGTGAACTTCACAGCCATGAACATCACAAATTCGAATGGACGGCAGAT
CAATTTCACAGAAGGGCAATTTATCGACTACCGCCATTTCGACAAGGCAG
GAATCACTCCGAGGTACGAATTCGGGTACGGCCTATCCTACACAACATTC
TCCATCCAGGAACTGTCCCTCGAGCCCACGAACAAAGGGAATGTGGCCTC
GCTTCCCGATAACAGCAGAGCTATACAGCCTGGCGGACACCCAGACCTCT
ATGAAATCCTCATAACCGTTGAGTCCAATGTAACCAATACTGGAGCGTTG
GCGGGCGCAACGGTACCTCAACTATATCTTGCCTTCCCGCAAGACACGAC
TCCTCCTGGAACCCCGGTCAAGGTGCTTCGAGGCTTTGACAAGATATATC
TCGAAGCTGGATGTAGTCGAACGGTGACATTTGAGCTAACCCGCAAGGAT
GTGAGCTTTTGGAATGTAGTGAAGCAACAGTGGGAGATCCCCGCTGGTAC
CTTTGAGGCTATGGTTGGGTTGAGCAGTCGGAAGATCTCGGTCAAGAAGC
AGTTTGATGTGCTTAGACGTCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004731CBS51388_004731Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004731-T1.exon1CBS51388_004731-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004731-T1.exon2CBS51388_004731-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004731-T1.cdsCBS51388_004731-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004731-T1CBS51388_004731-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteCAZy:GH3
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR002772
DBxrefInterPro:IPR013783
DBxrefInterPro:IPR036881
DBxrefInterPro:IPR036962
DBxrefInterPro:IPR026891
DBxrefInterPro:IPR001764
DBxrefPFAM:PF01915
DBxrefPFAM:PF14310
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1656634..1658568 +
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