You are here

Home

CBS51388_004775-T1, CBS51388_004775-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004775-T1
Unique NameCBS51388_004775-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1811801..1812698+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004775-T1 ID=CBS51388_004775-T1|Name=CBS51388_004775-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=898bp|location=Sequence derived from alignment at An07:1811801..1812698+ (Aspergillus niger CBS 513.88)
ATGTCTGGAAACACCAAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGG
CTCCAGCGCCCGTAAGTTGTTCTCTTCTTCTTCTTCTCATCGTCCTTCTA
CTGCTGTCGTCACCCTTTTTCTGCATGGATGATTTTACCCCTCCTTTGAA
GAGAAAGTGGGAGTACTGGGGGGGGCTTTCCAAAGAAAGCACTCCCACAA
TCACGAATCTCTTTTCCTGCCCTTTGATTGACGTCTATCCTCTCAATGGT
TACTGGATCCTTTGGCTGACTTTGACCTCTTCCCCTGCTCTCTAGCCAAG
ACGGGCCGTGTCGTCTTCAACCTCTTCGAGAAGGACGTCCCCAAGACTGC
TAAGAACTTCCGTGAGCTCTGCAAGCTTCCCCAGGGTCAGGGTTACAAGG
GCTCTACCTTCCACCGTGTCATCCCCCAGTTCATGCTCCAGGGTGGTGAC
TTCACCCGCCACAACGTGAGTAATCCTGCTATTGTGACCTCGCCTCCGTG
GGCGGCTGTATGAGAGAGAACAATTTGACTGATATAATCATCCAGGGTAC
CGGTGGTCGCTCCATCTACGGTGAGAAGTTCGCCGATGAGAACTTCATCT
ACAAGCACAACAAGCCCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAAC
ACGTAAGTTCTAGTTCTGTCGCTCGTAAATCTAGGCCCCAGGCAGCTAAC
AGCATCTGCAGCAACGGCTCCCAGTTCTTCATCACCACCGTTGTCACCTC
TTGGCTCGATGGCAAGCACGTCGTCTTCGGTGAGGTTGCCGATGCCGAGT
CCATGCAGGTCGTGAAGGAGATCGAGGCTCTCGGCTCCTCCTCCGGCTCC
GTCCGCTCTGCCGTCAAGCCCACCATCGTCGACTGCGGTGAGTTGTAA
back to top

Coding sequence (CDS) from alignment at An07:1811801..1812698+

>CBS51388_004775-T1 ID=CBS51388_004775-T1|Name=CBS51388_004775-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2100bp|location=Sequence derived from alignment at An07:1811801..1812698+ (Aspergillus niger CBS 513.88)
ATGTCTGGAAACACCAAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGG
CTCCAGCGCCCCCAAGACGGGCCGTGTCGTCTTCAACCTCTTCGAGAAGG
ACGTCCCCAAGACTGCTAAGAACTTCCGTGAGCTCTGCAAGCTTCCCCAG
GGTCAGGGTTACAAGGGCTCTACCTTCCACCGTGTCATCCCCCAGTTCAT
GCTCCAGGGTGGTGACTTCACCCGCCACAACGGTACCGGTGGTCGCTCCA
TCTACGGTGAGAAGTTCGCCGATGAGAACTTCATCTACAAGCACAACAAG
CCCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAACACCAACGGCTCCCA
GTTCTTCATCACCACCGTTGTCACCTCTTGGCTCGATGGCAAGCACGTCG
TCTTCGGTGAGGTTGCCGATGCCGAGTCCATGCAGGTCGTGAAGGAGATC
GAGGCTCTCGGCTCCTCCTCCGGCTCCGTCCGCTCTGCCGTCAAGCCCAC
CATCGTCGACTGCGGTGAGTTGTAAATGTCTGGAAACACCAAGGCCTTCT
TTGATATCCAGTACGCCCCCGTGGGCTCCAGCGCCCCCAAGACGGGCCGT
GTCGTCTTCAACCTCTTCGAGAAGGACGTCCCCAAGACTGCTAAGAACTT
CCGTGAGCTCTGCAAGCTTCCCCAGGGTCAGGGTTACAAGGGCTCTACCT
TCCACCGTGTCATCCCCCAGTTCATGCTCCAGGGTGGTGACTTCACCCGC
CACAACGGTACCGGTGGTCGCTCCATCTACGGTGAGAAGTTCGCCGATGA
GAACTTCATCTACAAGCACAACAAGCCCGGTCTCCTCTCCATGGCCAACG
CTGGTCCCAACACCAACGGCTCCCAGTTCTTCATCACCACCGTTGTCACC
TCTTGGCTCGATGGCAAGCACGTCGTCTTCGGTGAGGTTGCCGATGCCGA
GTCCATGCAGGTCGTGAAGGAGATCGAGGCTCTCGGCTCCTCCTCCGGCT
CCGTCCGCTCTGCCGTCAAGCCCACCATCGTCGACTGCGGTGAGTTGTAA
ATGTCTGGAAACACCAAGGCCTTCTTTGATATCCAGTACGCCCCCGTGGG
CTCCAGCGCCCCCAAGACGGGCCGTGTCGTCTTCAACCTCTTCGAGAAGG
ACGTCCCCAAGACTGCTAAGAACTTCCGTGAGCTCTGCAAGCTTCCCCAG
GGTCAGGGTTACAAGGGCTCTACCTTCCACCGTGTCATCCCCCAGTTCAT
GCTCCAGGGTGGTGACTTCACCCGCCACAACGGTACCGGTGGTCGCTCCA
TCTACGGTGAGAAGTTCGCCGATGAGAACTTCATCTACAAGCACAACAAG
CCCGGTCTCCTCTCCATGGCCAACGCTGGTCCCAACACCAACGGCTCCCA
GTTCTTCATCACCACCGTTGTCACCTCTTGGCTCGATGGCAAGCACGTCG
TCTTCGGTGAGGTTGCCGATGCCGAGTCCATGCAGGTCGTGAAGGAGATC
GAGGCTCTCGGCTCCTCCTCCGGCTCCGTCCGCTCTGCCGTCAAGCCCAC
CATCGTCGACTGCGGTGAGTTGTAAATGTCTGGAAACACCAAGGCCTTCT
TTGATATCCAGTACGCCCCCGTGGGCTCCAGCGCCCCCAAGACGGGCCGT
GTCGTCTTCAACCTCTTCGAGAAGGACGTCCCCAAGACTGCTAAGAACTT
CCGTGAGCTCTGCAAGCTTCCCCAGGGTCAGGGTTACAAGGGCTCTACCT
TCCACCGTGTCATCCCCCAGTTCATGCTCCAGGGTGGTGACTTCACCCGC
CACAACGGTACCGGTGGTCGCTCCATCTACGGTGAGAAGTTCGCCGATGA
GAACTTCATCTACAAGCACAACAAGCCCGGTCTCCTCTCCATGGCCAACG
CTGGTCCCAACACCAACGGCTCCCAGTTCTTCATCACCACCGTTGTCACC
TCTTGGCTCGATGGCAAGCACGTCGTCTTCGGTGAGGTTGCCGATGCCGA
GTCCATGCAGGTCGTGAAGGAGATCGAGGCTCTCGGCTCCTCCTCCGGCT
CCGTCCGCTCTGCCGTCAAGCCCACCATCGTCGACTGCGGTGAGTTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CSR1CBS51388_004775Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004775-T1.exon1CBS51388_004775-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004775-T1.exon2CBS51388_004775-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004775-T1.exon3CBS51388_004775-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004775-T1.exon4CBS51388_004775-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004775-T1.cdsCBS51388_004775-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004775-T1CBS51388_004775-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020892
DBxrefInterPro:IPR029000
DBxrefInterPro:IPR024936
DBxrefInterPro:IPR002130
DBxrefPFAM:PF00160
Productphosphatidylinositol transfer protein csr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1811801..1812698 +
Powered by Drupal