You are here

CBS51388_004787-T1, CBS51388_004787-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004787-T1
Unique NameCBS51388_004787-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1850632..1851490-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004787-T1 ID=CBS51388_004787-T1|Name=CBS51388_004787-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=859bp|location=Sequence derived from alignment at An07:1850632..1851490- (Aspergillus niger CBS 513.88)
ATGGCGCCCATCCGCCGCTACCTCCGGATCAGCAAATACACAGTCCTCGA ATGCCGGATCTACCTCGAGAACCCGTCCGATATACGGTGGCTCCTGAACG CGCGTGACGCCGTGCTTCCACGCGTATTCGCAGCGATCCGGCCGCTCGTG CTGCCCAAACTACGCGAGGAGAATGAGCGCTTATTTGCGAAGAAGAAGGG GAAGCCGGTGAAAGATGTTATCTCTGAAGGTAAGCTATTATCTAATATGA TTCATGTTTATTCTTCGGATATTGTGGGGCTTGGTTCGCTTTAGAAGGGA GAGAATGGCTGATCATGCAATTCGTGCAGAGGAATTCGATGTTGCGTTGT TTTTGCGCGAGTCGAGGACGCGCCATTCGCTTCTTACAAGGCATAAGGAG TTTGATGAGGATGAGGGGGGCTACGCTGTGGGTAGGGGGACAGGGTCTGG TCCTGGTGGGGCTGGGGCTGGGATATTGATTGAGAGTGATGATGAAGGAG AGGGTTTGGAGATGCGGGATATTCCACAGGCGACTAGTGATGATGATGGC GCGGGGGCGAAACGTCAGCGGGATGATGCTGATGGGCAGTCTGATGACTC GCCGGAGCGGCAGCGTACATCGAAGCGGAGGAAGGATGATGGTACGCTAT CGCGAGATGCAGATGATGGCGATGACAAGAAGATGCGCTTCAGGACCAAC TACGAGGGATTCAATATCTACGGCTGGGTGCTGTGTCTGCTTGTCACGCG GAAAGGTGACAAGACGGGAACAAGAGCTGCCACGGCAGAACCTGGTCGTC AGGTCCTCATGGAGGAATGGATATCAACCCAGGCGCAAGGCGATCTGCCC GAAGAATAA
back to top

Coding sequence (CDS) from alignment at An07:1850632..1851490-

>CBS51388_004787-T1 ID=CBS51388_004787-T1|Name=CBS51388_004787-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1518bp|location=Sequence derived from alignment at An07:1850632..1851490- (Aspergillus niger CBS 513.88)
AGGAATTCGATGTTGCGTTGTTTTTGCGCGAGTCGAGGACGCGCCATTCG
CTTCTTACAAGGCATAAGGAGTTTGATGAGGATGAGGGGGGCTACGCTGT
GGGTAGGGGGACAGGGTCTGGTCCTGGTGGGGCTGGGGCTGGGATATTGA
TTGAGAGTGATGATGAAGGAGAGGGTTTGGAGATGCGGGATATTCCACAG
GCGACTAGTGATGATGATGGCGCGGGGGCGAAACGTCAGCGGGATGATGC
TGATGGGCAGTCTGATGACTCGCCGGAGCGGCAGCGTACATCGAAGCGGA
GGAAGGATGATGGTACGCTATCGCGAGATGCAGATGATGGCGATGACAAG
AAGATGCGCTTCAGGACCAACTACGAGGGATTCAATATCTACGGCTGGGT
GCTGTGTCTGCTTGTCACGCGGAAAGGTGACAAGACGGGAACAAGAGCTG
CCACGGCAGAACCTGGTCGTCAGGTCCTCATGGAGGAATGGATATCAACC
CAGGCGCAAGGCGATCTGCCCGAAGAATAAATGGCGCCCATCCGCCGCTA
CCTCCGGATCAGCAAATACACAGTCCTCGAATGCCGGATCTACCTCGAGA
ACCCGTCCGATATACGGTGGCTCCTGAACGCGCGTGACGCCGTGCTTCCA
CGCGTATTCGCAGCGATCCGGCCGCTCGTGCTGCCCAAACTACGCGAGGA
GAATGAGCGCTTATTTGCGAAGAAGAAGGGGAAGCCGGTGAAAGATGTTA
TCTCTGAAGAGGAATTCGATGTTGCGTTGTTTTTGCGCGAGTCGAGGACG
CGCCATTCGCTTCTTACAAGGCATAAGGAGTTTGATGAGGATGAGGGGGG
CTACGCTGTGGGTAGGGGGACAGGGTCTGGTCCTGGTGGGGCTGGGGCTG
GGATATTGATTGAGAGTGATGATGAAGGAGAGGGTTTGGAGATGCGGGAT
ATTCCACAGGCGACTAGTGATGATGATGGCGCGGGGGCGAAACGTCAGCG
GGATGATGCTGATGGGCAGTCTGATGACTCGCCGGAGCGGCAGCGTACAT
CGAAGCGGAGGAAGGATGATGGTACGCTATCGCGAGATGCAGATGATGGC
GATGACAAGAAGATGCGCTTCAGGACCAACTACGAGGGATTCAATATCTA
CGGCTGGGTGCTGTGTCTGCTTGTCACGCGGAAAGGTGACAAGACGGGAA
CAAGAGCTGCCACGGCAGAACCTGGTCGTCAGGTCCTCATGGAGGAATGG
ATATCAACCCAGGCGCAAGGCGATCTGCCCGAAGAATAAATGGCGCCCAT
CCGCCGCTACCTCCGGATCAGCAAATACACAGTCCTCGAATGCCGGATCT
ACCTCGAGAACCCGTCCGATATACGGTGGCTCCTGAACGCGCGTGACGCC
GTGCTTCCACGCGTATTCGCAGCGATCCGGCCGCTCGTGCTGCCCAAACT
ACGCGAGGAGAATGAGCGCTTATTTGCGAAGAAGAAGGGGAAGCCGGTGA
AAGATGTTATCTCTGAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004787CBS51388_004787Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004787-T1CBS51388_004787-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004787-T1.cdsCBS51388_004787-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004787-T1.exon2CBS51388_004787-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004787-T1.exon1CBS51388_004787-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1850632..1851490 -