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CBS51388_004798-T1, CBS51388_004798-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004798-T1
Unique NameCBS51388_004798-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1898222..1900077+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004798-T1 ID=CBS51388_004798-T1|Name=CBS51388_004798-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1856bp|location=Sequence derived from alignment at An07:1898222..1900077+ (Aspergillus niger CBS 513.88)
ATGCGACAGGCCATGTCCACTCGCACCTTCGGTGCATTTCGAAGGGATGT
TCAAATAGCTCAAGCTTCCGCCGCCCCGTATTCTTCGTACGGAGGTTCGT
CATCTACCTACGACGACGGTCAGTGGCACGGAGGATATTCATCGGGCAGT
TCATCCGATCAACAAGCAGGCTCCGGTCAGAGCCAGTCAGGAACTATGTC
TTCAGGTAGTGGGAACACAGGGAGCTCGGGCACAAGCGGAGACTCCTACG
GCGCTGGTAGTGCCGCCCAAGCCAGTCCTGTTGCTTCGACAGAGAACTCA
GCGTCGTCATGGTCTGAAGGAAGTTCCGCCAGCAGTGGCCAGGGCAATAC
CCAGGGGTGGAGTAGCCAATATGTTCAGAACGCACCGTCTCCATCGGCTG
TAAGTGTGACATGGGAAACGTCGGGCATTCCTACACAGACAGCCACCTGG
ACCAGCATGACATTGAGCACCTCCACAACCAGCAATACCACACCCACTCG
CTCGAGCACTACCGAAACCGAAGCCCCCGCCAGTACAACGACAGCCGCCT
CTGCTGCAGGTACCTCGCATGTCGCTACGCCCCAGTCTACCAAGTTGGCC
ATGGGGCTGAGTATTGCATTGGCTGTCGTGGCCATCCTAGGCTTCTTTGT
GTGGTCATTGCACCGGAAGAAACGGGCCTTGCAGAGGGCAATAGCTGGCC
ACACCGGCCGCAACGAGAAGCCAGACCCTAGTCCACAACAACCGTCAATG
ATGAAGAGATGTGCCAACAGCATCTGCAACGGTGCATCAGCCATTAATTT
CAAGTCTGCCAAATCGCGTCTACGTTCGACTTCCATGCGTCTTCCTGGAG
CTCCCAAGGCGGAGTACAAACCAATCAAGGACTTGGCGCTCAAGGTCTAT
GCCAATGGCCGCGGGATGCTACGTACAGCAGCGAACATTGCACGGTCTAC
CTGGAAGAAGTCGAACGTGCATGTTCCCCGACCTGCATCTGAGTATATGC
ACGATCCCAACAGTGTCGTGCGGGATGGCTTCCGTCAGATCCATCGGTCA
TACTTGTCTTTGCCTCAGACACGCAGCATCAACAACAATAAGGATAACAA
GGATATCCATCCCGCATTGCGAGGTCTACATTCCTCCACTGAGACATTAG
TCGGGGCAGACATGGGAAGAATCAAGGAAGTAACCGTGTCCAACACTCCT
CCAAAAGAAGAGACTGGCAGGATTCCAGAGGCCAATGTCGCTACAGTGGA
GACCATTTCGCGAGGCACATCGACGAATTCCAGCTCCCCGGCAGTTTCGA
GAAGCCCAACCATTGAGGTCCCTACTATCGAAATACCCACTTCTCCTGGA
GCACCTCCAATTTCATTGGCTCGTGTGTATCGCGTCGACATGGATTTCCG
CCCTGTGAGCCCTGAACACGTTGGACTCAAGGAGGGACAAACGGCTATCC
TACACCTAGTATACGAAGATGGATGGGTAAGACACGAGCCTTTGGTAACC
CGTCCTATAACTCTAGCTAACATAGTCAGGCATTGGTCACTGTCCTCGAA
ACCAACAAAGAAGGCCTCGTCCCACGGGCCTGTTTCTCCGCCCAACCAAT
ACGGAACCAAGCCCAGTATCTCGGAAACAACATCAGTATCTCGACGGATC
ACGTTCCTCGCTCTCCGCGTCCTGCGACTCCCACCTCGCCATGCGAGTCG
ACATCTGATGGCGATCTCGGACGGTTCTACTCGAACTGCGTGAGTCCGGA
GTTGCCGCCAGTTGACGATGAGAGACCACAGACGCCGCGGCTGAAGTCTT
TGCCGTCGATTGCGAGTTTCCTGAAATCACCTCCCAGCTTTAAGAGCATG
GTTTAG
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Coding sequence (CDS) from alignment at An07:1898222..1900077+

>CBS51388_004798-T1 ID=CBS51388_004798-T1|Name=CBS51388_004798-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3606bp|location=Sequence derived from alignment at An07:1898222..1900077+ (Aspergillus niger CBS 513.88)
ATGCGACAGGCCATGTCCACTCGCACCTTCGGTGCATTTCGAAGGGATGT
TCAAATAGCTCAAGCTTCCGCCGCCCCGTATTCTTCGTACGGAGGTTCGT
CATCTACCTACGACGACGGTCAGTGGCACGGAGGATATTCATCGGGCAGT
TCATCCGATCAACAAGCAGGCTCCGGTCAGAGCCAGTCAGGAACTATGTC
TTCAGGTAGTGGGAACACAGGGAGCTCGGGCACAAGCGGAGACTCCTACG
GCGCTGGTAGTGCCGCCCAAGCCAGTCCTGTTGCTTCGACAGAGAACTCA
GCGTCGTCATGGTCTGAAGGAAGTTCCGCCAGCAGTGGCCAGGGCAATAC
CCAGGGGTGGAGTAGCCAATATGTTCAGAACGCACCGTCTCCATCGGCTG
TAAGTGTGACATGGGAAACGTCGGGCATTCCTACACAGACAGCCACCTGG
ACCAGCATGACATTGAGCACCTCCACAACCAGCAATACCACACCCACTCG
CTCGAGCACTACCGAAACCGAAGCCCCCGCCAGTACAACGACAGCCGCCT
CTGCTGCAGGTACCTCGCATGTCGCTACGCCCCAGTCTACCAAGTTGGCC
ATGGGGCTGAGTATTGCATTGGCTGTCGTGGCCATCCTAGGCTTCTTTGT
GTGGTCATTGCACCGGAAGAAACGGGCCTTGCAGAGGGCAATAGCTGGCC
ACACCGGCCGCAACGAGAAGCCAGACCCTAGTCCACAACAACCGTCAATG
ATGAAGAGATGTGCCAACAGCATCTGCAACGGTGCATCAGCCATTAATTT
CAAGTCTGCCAAATCGCGTCTACGTTCGACTTCCATGCGTCTTCCTGGAG
CTCCCAAGGCGGAGTACAAACCAATCAAGGACTTGGCGCTCAAGGTCTAT
GCCAATGGCCGCGGGATGCTACGTACAGCAGCGAACATTGCACGGTCTAC
CTGGAAGAAGTCGAACGTGCATGTTCCCCGACCTGCATCTGAGTATATGC
ACGATCCCAACAGTGTCGTGCGGGATGGCTTCCGTCAGATCCATCGGTCA
TACTTGTCTTTGCCTCAGACACGCAGCATCAACAACAATAAGGATAACAA
GGATATCCATCCCGCATTGCGAGGTCTACATTCCTCCACTGAGACATTAG
TCGGGGCAGACATGGGAAGAATCAAGGAAGTAACCGTGTCCAACACTCCT
CCAAAAGAAGAGACTGGCAGGATTCCAGAGGCCAATGTCGCTACAGTGGA
GACCATTTCGCGAGGCACATCGACGAATTCCAGCTCCCCGGCAGTTTCGA
GAAGCCCAACCATTGAGGTCCCTACTATCGAAATACCCACTTCTCCTGGA
GCACCTCCAATTTCATTGGCTCGTGTGTATCGCGTCGACATGGATTTCCG
CCCTGTGAGCCCTGAACACGTTGGACTCAAGGAGGGACAAACGGCTATCC
TACACCTAGTATACGAAGATGGATGGGCATTGGTCACTGTCCTCGAAACC
AACAAAGAAGGCCTCGTCCCACGGGCCTGTTTCTCCGCCCAACCAATACG
GAACCAAGCCCAGTATCTCGGAAACAACATCAGTATCTCGACGGATCACG
TTCCTCGCTCTCCGCGTCCTGCGACTCCCACCTCGCCATGCGAGTCGACA
TCTGATGGCGATCTCGGACGGTTCTACTCGAACTGCGTGAGTCCGGAGTT
GCCGCCAGTTGACGATGAGAGACCACAGACGCCGCGGCTGAAGTCTTTGC
CGTCGATTGCGAGTTTCCTGAAATCACCTCCCAGCTTTAAGAGCATGGTT
TAGATGCGACAGGCCATGTCCACTCGCACCTTCGGTGCATTTCGAAGGGA
TGTTCAAATAGCTCAAGCTTCCGCCGCCCCGTATTCTTCGTACGGAGGTT
CGTCATCTACCTACGACGACGGTCAGTGGCACGGAGGATATTCATCGGGC
AGTTCATCCGATCAACAAGCAGGCTCCGGTCAGAGCCAGTCAGGAACTAT
GTCTTCAGGTAGTGGGAACACAGGGAGCTCGGGCACAAGCGGAGACTCCT
ACGGCGCTGGTAGTGCCGCCCAAGCCAGTCCTGTTGCTTCGACAGAGAAC
TCAGCGTCGTCATGGTCTGAAGGAAGTTCCGCCAGCAGTGGCCAGGGCAA
TACCCAGGGGTGGAGTAGCCAATATGTTCAGAACGCACCGTCTCCATCGG
CTGTAAGTGTGACATGGGAAACGTCGGGCATTCCTACACAGACAGCCACC
TGGACCAGCATGACATTGAGCACCTCCACAACCAGCAATACCACACCCAC
TCGCTCGAGCACTACCGAAACCGAAGCCCCCGCCAGTACAACGACAGCCG
CCTCTGCTGCAGGTACCTCGCATGTCGCTACGCCCCAGTCTACCAAGTTG
GCCATGGGGCTGAGTATTGCATTGGCTGTCGTGGCCATCCTAGGCTTCTT
TGTGTGGTCATTGCACCGGAAGAAACGGGCCTTGCAGAGGGCAATAGCTG
GCCACACCGGCCGCAACGAGAAGCCAGACCCTAGTCCACAACAACCGTCA
ATGATGAAGAGATGTGCCAACAGCATCTGCAACGGTGCATCAGCCATTAA
TTTCAAGTCTGCCAAATCGCGTCTACGTTCGACTTCCATGCGTCTTCCTG
GAGCTCCCAAGGCGGAGTACAAACCAATCAAGGACTTGGCGCTCAAGGTC
TATGCCAATGGCCGCGGGATGCTACGTACAGCAGCGAACATTGCACGGTC
TACCTGGAAGAAGTCGAACGTGCATGTTCCCCGACCTGCATCTGAGTATA
TGCACGATCCCAACAGTGTCGTGCGGGATGGCTTCCGTCAGATCCATCGG
TCATACTTGTCTTTGCCTCAGACACGCAGCATCAACAACAATAAGGATAA
CAAGGATATCCATCCCGCATTGCGAGGTCTACATTCCTCCACTGAGACAT
TAGTCGGGGCAGACATGGGAAGAATCAAGGAAGTAACCGTGTCCAACACT
CCTCCAAAAGAAGAGACTGGCAGGATTCCAGAGGCCAATGTCGCTACAGT
GGAGACCATTTCGCGAGGCACATCGACGAATTCCAGCTCCCCGGCAGTTT
CGAGAAGCCCAACCATTGAGGTCCCTACTATCGAAATACCCACTTCTCCT
GGAGCACCTCCAATTTCATTGGCTCGTGTGTATCGCGTCGACATGGATTT
CCGCCCTGTGAGCCCTGAACACGTTGGACTCAAGGAGGGACAAACGGCTA
TCCTACACCTAGTATACGAAGATGGATGGGCATTGGTCACTGTCCTCGAA
ACCAACAAAGAAGGCCTCGTCCCACGGGCCTGTTTCTCCGCCCAACCAAT
ACGGAACCAAGCCCAGTATCTCGGAAACAACATCAGTATCTCGACGGATC
ACGTTCCTCGCTCTCCGCGTCCTGCGACTCCCACCTCGCCATGCGAGTCG
ACATCTGATGGCGATCTCGGACGGTTCTACTCGAACTGCGTGAGTCCGGA
GTTGCCGCCAGTTGACGATGAGAGACCACAGACGCCGCGGCTGAAGTCTT
TGCCGTCGATTGCGAGTTTCCTGAAATCACCTCCCAGCTTTAAGAGCATG
GTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004798CBS51388_004798Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004798-T1.exon1CBS51388_004798-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004798-T1.exon2CBS51388_004798-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004798-T1.cdsCBS51388_004798-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004798-T1CBS51388_004798-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR001452
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1898222..1900077 +
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