You are here

CBS51388_004799-T1, CBS51388_004799-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004799-T1
Unique NameCBS51388_004799-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1903596..1905058-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004799-T1 ID=CBS51388_004799-T1|Name=CBS51388_004799-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1463bp|location=Sequence derived from alignment at An07:1903596..1905058- (Aspergillus niger CBS 513.88)
ATGGCGGACGGTCGACACCACAACCCGGCGCTGCAGCCTGAGAACTTCGA CGCCTCAGAACTTACCAACGCCTTCGAACAATTGATGCGCAACAAGAGAT TCAACCAGCTTCAGGAACAGTCCCGAGCTTCATCCCGCACACAATCGCCA GCGCCCGCGGCTATGTCCCCTGGCCTGTACCCGCCTCATCCCTCGCGAGC ACCACCACCACCGCCTCCGACCGCCGCCCAATACCCTCCCCAAATGCCTC CGCAAACGTCTACTCAATCACCCTTGCTCCGCAATCTTCCTATCGTTCCT GCTCCCCCACAAGATCCGGCTTCTCTGAAATTTCGCAACCTTCTCCACGT TCTTTCTGTAACACCGACCAAATATGAGAACCCCGGTCTTTTGGATGAGG CTCTCGCCCACATTCCCCTCGACCGGTTGTACTCGGAGGCAGAGGAAGAA AGTCAGATTATGCAGGCTCAGGCAGCTAGTGTAGGAGGAAAGCCGGAATG GGGATACCAAGACTGCGTCATTCGGGCGCTCCTCAGGTGAGTTATTTTTC AACGTAATGAATCGTTTCCTGAGCTTTGCTGACCGATCTTGATATAGGTG GTTCAAGAATTGCTTCTTTAAATTCGTCAATAACCCTCCCTGCGCTCGAT GCGGCTCGCCCTCGATTGCCCAAGGAATGACTCCCCCGTCGCCCGATGAG ACCGCACGCGGTGCAACTCGTGTCGAATTGTACCGATGCTCGGAAGGAAT GTGTGGTGCCTACGAAAGATTCCCCCGCTACTCGGATGTGTGGCAGTTGC TGCAAACTCGACGAGGACGTGCCGGTGAATGGGCCAACTGCTTTAGCATG TTCTGCAGAGCTCTTGGTGGACGTGTACGATGGGTGTGGAACGCCGAGGA TCACGTCTGGACTGAGGTGTACTCGGAGCATCAGCGCCGTTGGGTGCATG TAGATGCTTGTGAGGAGGCCTGGGATCAGCCCCGTCTCTACACTGAGGGT ATGTATCTAGTGTCCATTCGTCTGACATACGCTAATCATAGCTATAGGCT GGGGACGAAAAATCTCTTACTGCGTTGCATTCTCGATCGATGGAGCCACA GATGTTACTAGACGCTATGTTCGAAGCCCAACACGACATGGCAAGGCCCG GAACCGTGCTCCTGAGGAGGTGCTTGTGTGGGTGATCCACGAGATCCGGA AGAAGCGCCGGGAGAATCTCTCGAAGACGGATCAGCGACGCCTGATGAAG GAAGATGAGCGTGAAGAGAGGGAGCTGCGTGCCTACACTGCGTCCGCCCT TGCTGCGGAACTGAACAACCTCTTCCCCCAGAACACACCCACCGGCCGAC CTGAGGATCAGAAGACGCCCGCCTCGCGGCAGGATGTCCCCATGGAGTGG CTCGATACTCGACAGAGGAATTCTGGCCATTCTGGCCCTGACGGATCGCA CAACGGCCGGTAA
back to top

Coding sequence (CDS) from alignment at An07:1903596..1905058-

>CBS51388_004799-T1 ID=CBS51388_004799-T1|Name=CBS51388_004799-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4059bp|location=Sequence derived from alignment at An07:1903596..1905058- (Aspergillus niger CBS 513.88)
GCTGGGGACGAAAAATCTCTTACTGCGTTGCATTCTCGATCGATGGAGCC
ACAGATGTTACTAGACGCTATGTTCGAAGCCCAACACGACATGGCAAGGC
CCGGAACCGTGCTCCTGAGGAGGTGCTTGTGTGGGTGATCCACGAGATCC
GGAAGAAGCGCCGGGAGAATCTCTCGAAGACGGATCAGCGACGCCTGATG
AAGGAAGATGAGCGTGAAGAGAGGGAGCTGCGTGCCTACACTGCGTCCGC
CCTTGCTGCGGAACTGAACAACCTCTTCCCCCAGAACACACCCACCGGCC
GACCTGAGGATCAGAAGACGCCCGCCTCGCGGCAGGATGTCCCCATGGAG
TGGCTCGATACTCGACAGAGGAATTCTGGCCATTCTGGCCCTGACGGATC
GCACAACGGCCGGTAAGTGGTTCAAGAATTGCTTCTTTAAATTCGTCAAT
AACCCTCCCTGCGCTCGATGCGGCTCGCCCTCGATTGCCCAAGGAATGAC
TCCCCCGTCGCCCGATGAGACCGCACGCGGTGCAACTCGTGTCGAATTGT
ACCGATGCTCGGAAGGAATGTGTGGTGCCTACGAAAGATTCCCCCGCTAC
TCGGATGTGTGGCAGTTGCTGCAAACTCGACGAGGACGTGCCGGTGAATG
GGCCAACTGCTTTAGCATGTTCTGCAGAGCTCTTGGTGGACGTGTACGAT
GGGTGTGGAACGCCGAGGATCACGTCTGGACTGAGGTGTACTCGGAGCAT
CAGCGCCGTTGGGTGCATGTAGATGCTTGTGAGGAGGCCTGGGATCAGCC
CCGTCTCTACACTGAGGATGGCGGACGGTCGACACCACAACCCGGCGCTG
CAGCCTGAGAACTTCGACGCCTCAGAACTTACCAACGCCTTCGAACAATT
GATGCGCAACAAGAGATTCAACCAGCTTCAGGAACAGTCCCGAGCTTCAT
CCCGCACACAATCGCCAGCGCCCGCGGCTATGTCCCCTGGCCTGTACCCG
CCTCATCCCTCGCGAGCACCACCACCACCGCCTCCGACCGCCGCCCAATA
CCCTCCCCAAATGCCTCCGCAAACGTCTACTCAATCACCCTTGCTCCGCA
ATCTTCCTATCGTTCCTGCTCCCCCACAAGATCCGGCTTCTCTGAAATTT
CGCAACCTTCTCCACGTTCTTTCTGTAACACCGACCAAATATGAGAACCC
CGGTCTTTTGGATGAGGCTCTCGCCCACATTCCCCTCGACCGGTTGTACT
CGGAGGCAGAGGAAGAAAGTCAGATTATGCAGGCTCAGGCAGCTAGTGTA
GGAGGAAAGCCGGAATGGGGATACCAAGACTGCGTCATTCGGGCGCTCCT
CAGGCTGGGGACGAAAAATCTCTTACTGCGTTGCATTCTCGATCGATGGA
GCCACAGATGTTACTAGACGCTATGTTCGAAGCCCAACACGACATGGCAA
GGCCCGGAACCGTGCTCCTGAGGAGGTGCTTGTGTGGGTGATCCACGAGA
TCCGGAAGAAGCGCCGGGAGAATCTCTCGAAGACGGATCAGCGACGCCTG
ATGAAGGAAGATGAGCGTGAAGAGAGGGAGCTGCGTGCCTACACTGCGTC
CGCCCTTGCTGCGGAACTGAACAACCTCTTCCCCCAGAACACACCCACCG
GCCGACCTGAGGATCAGAAGACGCCCGCCTCGCGGCAGGATGTCCCCATG
GAGTGGCTCGATACTCGACAGAGGAATTCTGGCCATTCTGGCCCTGACGG
ATCGCACAACGGCCGGTAAGTGGTTCAAGAATTGCTTCTTTAAATTCGTC
AATAACCCTCCCTGCGCTCGATGCGGCTCGCCCTCGATTGCCCAAGGAAT
GACTCCCCCGTCGCCCGATGAGACCGCACGCGGTGCAACTCGTGTCGAAT
TGTACCGATGCTCGGAAGGAATGTGTGGTGCCTACGAAAGATTCCCCCGC
TACTCGGATGTGTGGCAGTTGCTGCAAACTCGACGAGGACGTGCCGGTGA
ATGGGCCAACTGCTTTAGCATGTTCTGCAGAGCTCTTGGTGGACGTGTAC
GATGGGTGTGGAACGCCGAGGATCACGTCTGGACTGAGGTGTACTCGGAG
CATCAGCGCCGTTGGGTGCATGTAGATGCTTGTGAGGAGGCCTGGGATCA
GCCCCGTCTCTACACTGAGGATGGCGGACGGTCGACACCACAACCCGGCG
CTGCAGCCTGAGAACTTCGACGCCTCAGAACTTACCAACGCCTTCGAACA
ATTGATGCGCAACAAGAGATTCAACCAGCTTCAGGAACAGTCCCGAGCTT
CATCCCGCACACAATCGCCAGCGCCCGCGGCTATGTCCCCTGGCCTGTAC
CCGCCTCATCCCTCGCGAGCACCACCACCACCGCCTCCGACCGCCGCCCA
ATACCCTCCCCAAATGCCTCCGCAAACGTCTACTCAATCACCCTTGCTCC
GCAATCTTCCTATCGTTCCTGCTCCCCCACAAGATCCGGCTTCTCTGAAA
TTTCGCAACCTTCTCCACGTTCTTTCTGTAACACCGACCAAATATGAGAA
CCCCGGTCTTTTGGATGAGGCTCTCGCCCACATTCCCCTCGACCGGTTGT
ACTCGGAGGCAGAGGAAGAAAGTCAGATTATGCAGGCTCAGGCAGCTAGT
GTAGGAGGAAAGCCGGAATGGGGATACCAAGACTGCGTCATTCGGGCGCT
CCTCAGGCTGGGGACGAAAAATCTCTTACTGCGTTGCATTCTCGATCGAT
GGAGCCACAGATGTTACTAGACGCTATGTTCGAAGCCCAACACGACATGG
CAAGGCCCGGAACCGTGCTCCTGAGGAGGTGCTTGTGTGGGTGATCCACG
AGATCCGGAAGAAGCGCCGGGAGAATCTCTCGAAGACGGATCAGCGACGC
CTGATGAAGGAAGATGAGCGTGAAGAGAGGGAGCTGCGTGCCTACACTGC
GTCCGCCCTTGCTGCGGAACTGAACAACCTCTTCCCCCAGAACACACCCA
CCGGCCGACCTGAGGATCAGAAGACGCCCGCCTCGCGGCAGGATGTCCCC
ATGGAGTGGCTCGATACTCGACAGAGGAATTCTGGCCATTCTGGCCCTGA
CGGATCGCACAACGGCCGGTAAGTGGTTCAAGAATTGCTTCTTTAAATTC
GTCAATAACCCTCCCTGCGCTCGATGCGGCTCGCCCTCGATTGCCCAAGG
AATGACTCCCCCGTCGCCCGATGAGACCGCACGCGGTGCAACTCGTGTCG
AATTGTACCGATGCTCGGAAGGAATGTGTGGTGCCTACGAAAGATTCCCC
CGCTACTCGGATGTGTGGCAGTTGCTGCAAACTCGACGAGGACGTGCCGG
TGAATGGGCCAACTGCTTTAGCATGTTCTGCAGAGCTCTTGGTGGACGTG
TACGATGGGTGTGGAACGCCGAGGATCACGTCTGGACTGAGGTGTACTCG
GAGCATCAGCGCCGTTGGGTGCATGTAGATGCTTGTGAGGAGGCCTGGGA
TCAGCCCCGTCTCTACACTGAGGATGGCGGACGGTCGACACCACAACCCG
GCGCTGCAGCCTGAGAACTTCGACGCCTCAGAACTTACCAACGCCTTCGA
ACAATTGATGCGCAACAAGAGATTCAACCAGCTTCAGGAACAGTCCCGAG
CTTCATCCCGCACACAATCGCCAGCGCCCGCGGCTATGTCCCCTGGCCTG
TACCCGCCTCATCCCTCGCGAGCACCACCACCACCGCCTCCGACCGCCGC
CCAATACCCTCCCCAAATGCCTCCGCAAACGTCTACTCAATCACCCTTGC
TCCGCAATCTTCCTATCGTTCCTGCTCCCCCACAAGATCCGGCTTCTCTG
AAATTTCGCAACCTTCTCCACGTTCTTTCTGTAACACCGACCAAATATGA
GAACCCCGGTCTTTTGGATGAGGCTCTCGCCCACATTCCCCTCGACCGGT
TGTACTCGGAGGCAGAGGAAGAAAGTCAGATTATGCAGGCTCAGGCAGCT
AGTGTAGGAGGAAAGCCGGAATGGGGATACCAAGACTGCGTCATTCGGGC
GCTCCTCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PNG1CBS51388_004799Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004799-T1CBS51388_004799-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004799-T1.cdsCBS51388_004799-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004799-T1.exon3CBS51388_004799-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004799-T1.exon2CBS51388_004799-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004799-T1.exon1CBS51388_004799-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR018325
DBxrefInterPro:IPR002931
DBxrefPFAM:PF01841
DBxrefPFAM:PF03835
Productpeptide-N4-(N-acetyl-beta- glucosaminyl)asparagine amidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1903596..1905058 -