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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:1969138..1970638+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004813-T1 ID=CBS51388_004813-T1|Name=CBS51388_004813-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1501bp|location=Sequence derived from alignment at An07:1969138..1970638+ (Aspergillus niger CBS 513.88)
ATGTCAGATGAGCAACTCGCCCGTCAGACAGCCTCGAGCTTCGATAGGCT
CGAAAACTTCAACTTCCTTCTCTCTCGACACGATCCTAACTTGGCCAAAA
GCCGTCACTATTCCTTTGACGCAGATTCTACCGGCCTGGCTGCCTTTTCG
AATCTGAACATGGATTACGATCAGACCGAGGGGATGGGCGGTCTCTCCGT
CAGTTCGTACGATAGCATTGAGGACGAACGCAGTCCGATCGATGTGCGCG
GATATCCGTATCATGGTAAGTCTCCAAGATCTATGACTCTCATCGTTGCA
TCGTTTGCGCAATTTTCGTGCTTTGTGGTTCGCTTTAATTTCGTTAGCCC
TACGGCATTGGATGGCTTTATTATGCTGGAAGTTGCTGTGGAAGCGCATG
TAACCGCAGATGCCTTGTCCCTGTTGCTTGTGACCAGATTTGTCTTGAAC
ATGATCCTCCCTGCGTCCTTTAATTCTGGCTGCCTGAGAATGGCCATATT
GAATACCTTCTGTAACCACTCTTCCCCTTTATTTGTTCGGGGGGTTCTCT
CGATTCTGTTGATTTTTTTCGCTGCATTGCGAAAATTCTGCAGCTCCGGG
ACACCTTACCCACCTTGGTGTTGGTTCTATGCTTGTTCGCTCGTCTTTGG
TGTCATTAGCTTGAGGTTTTGGTGGGTTGCCATCCCCATGTCTGGATGAG
CGCTCTATTTGAGCACGCAATCGTTCACACCAATGACAACGTCGGGAACC
CTGTCGTTAACGGACCCTTATGCCGAGCTTACTCTTCTTGATCATCCAAG
GCCCCCTTCAAGTGCTCCATGTTCCCCCTGCTTCTGTTTCCTATCTTGAA
CATTGTCCCCTTCTTCTTGTTGTTGTTGTCTCCATATCACTTCTTGGCGT
TGGGTGTTACCACCCCATGCTACCTACTACCAAGGGACAAGTGTATTGAC
TGCTCTATACAGACCAAATGCTGTCCTACTCAGCTCATCCCATCTATCCA
CCTATCTCATATGGTCCTCCCGATGACCTGGGACACGGTGCGGGTGCTAT
GACACCCTCGGATGTCTCCTCTTCGATCTCACCTCCCAACGGTCATATCA
ACCACAGCAAGTACAGCACGCAGATTCCTGGCGATCACCTTGCTTCCGCC
CTTGGCCAGGAGGAGGGCGTCCGCCGTGCTGCCGAAGAAGACCGGCGACG
CCGCAACACGGCTGCCAGCGCCCGGTTTCGCATGAAGAAGAAACAGCGTG
AACAGGCCCTCGAACGCACCGTGCGCGAAACCACCGAAAAGAATGCGACT
CTCGAGGCGCGTGTAGCACAGCTCGAAATGGAGAACCGCTGGCTGAAGAA
CCTCTTGACCGAAAAGCACGAAGCCAGCACGACTCGGATGGCTCCTCCCC
CAACTGACAGCACAGCCTTGGCCTCCCAAGGTACCAACGCTACTGGCCCC
GGGCAAAAACATATTCAGCCAAAAAAGAAGGGCGTCGGGACCGACAACTG
A back to topCoding sequence (CDS) from alignment at An07:1969138..1970638+ >CBS51388_004813-T1 ID=CBS51388_004813-T1|Name=CBS51388_004813-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1608bp|location=Sequence derived from alignment at An07:1969138..1970638+ (Aspergillus niger CBS 513.88)
ATGTCAGATGAGCAACTCGCCCGTCAGACAGCCTCGAGCTTCGATAGGCT
CGAAAACTTCAACTTCCTTCTCTCTCGACACGATCCTAACTTGGCCAAAA
GCCGTCACTATTCCTTTGACGCAGATTCTACCGGCCTGGCTGCCTTTTCG
AATCTGAACATGGATTACGATCAGACCGAGGGGATGGGCGGTCTCTCCGT
CAGTTCGTACGATAGCATTGAGGACGAACGCAGTCCGATCGATGTGCGCG
GATATCCGTATCATGACCAAATGCTGTCCTACTCAGCTCATCCCATCTAT
CCACCTATCTCATATGGTCCTCCCGATGACCTGGGACACGGTGCGGGTGC
TATGACACCCTCGGATGTCTCCTCTTCGATCTCACCTCCCAACGGTCATA
TCAACCACAGCAAGTACAGCACGCAGATTCCTGGCGATCACCTTGCTTCC
GCCCTTGGCCAGGAGGAGGGCGTCCGCCGTGCTGCCGAAGAAGACCGGCG
ACGCCGCAACACGGCTGCCAGCGCCCGGTTTCGCATGAAGAAGAAACAGC
GTGAACAGGCCCTCGAACGCACCGTGCGCGAAACCACCGAAAAGAATGCG
ACTCTCGAGGCGCGTGTAGCACAGCTCGAAATGGAGAACCGCTGGCTGAA
GAACCTCTTGACCGAAAAGCACGAAGCCAGCACGACTCGGATGGCTCCTC
CCCCAACTGACAGCACAGCCTTGGCCTCCCAAGGTACCAACGCTACTGGC
CCCGGGCAAAAACATATTCAGCCAAAAAAGAAGGGCGTCGGGACCGACAA
CTGAATGTCAGATGAGCAACTCGCCCGTCAGACAGCCTCGAGCTTCGATA
GGCTCGAAAACTTCAACTTCCTTCTCTCTCGACACGATCCTAACTTGGCC
AAAAGCCGTCACTATTCCTTTGACGCAGATTCTACCGGCCTGGCTGCCTT
TTCGAATCTGAACATGGATTACGATCAGACCGAGGGGATGGGCGGTCTCT
CCGTCAGTTCGTACGATAGCATTGAGGACGAACGCAGTCCGATCGATGTG
CGCGGATATCCGTATCATGACCAAATGCTGTCCTACTCAGCTCATCCCAT
CTATCCACCTATCTCATATGGTCCTCCCGATGACCTGGGACACGGTGCGG
GTGCTATGACACCCTCGGATGTCTCCTCTTCGATCTCACCTCCCAACGGT
CATATCAACCACAGCAAGTACAGCACGCAGATTCCTGGCGATCACCTTGC
TTCCGCCCTTGGCCAGGAGGAGGGCGTCCGCCGTGCTGCCGAAGAAGACC
GGCGACGCCGCAACACGGCTGCCAGCGCCCGGTTTCGCATGAAGAAGAAA
CAGCGTGAACAGGCCCTCGAACGCACCGTGCGCGAAACCACCGAAAAGAA
TGCGACTCTCGAGGCGCGTGTAGCACAGCTCGAAATGGAGAACCGCTGGC
TGAAGAACCTCTTGACCGAAAAGCACGAAGCCAGCACGACTCGGATGGCT
CCTCCCCCAACTGACAGCACAGCCTTGGCCTCCCAAGGTACCAACGCTAC
TGGCCCCGGGCAAAAACATATTCAGCCAAAAAAGAAGGGCGTCGGGACCG
ACAACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004827 |
| DBxref | PFAM:PF07716 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:1969138..1970638 + |
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