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CBS51388_004837-T1, CBS51388_004837-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004837-T1
Unique NameCBS51388_004837-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:2052005..2053850-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004837-T1 ID=CBS51388_004837-T1|Name=CBS51388_004837-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1846bp|location=Sequence derived from alignment at An07:2052005..2053850- (Aspergillus niger CBS 513.88)
ATGGCATCATTACTCGGCGCAGGCTACGAGTCTAGCGATGATGACTCGGC
CAAGCCCACGCAAGTCCAACCTACGGTGCCCTCAGCGACTACGATCGTCG
CGGCGCCTGAAGTGAACACAGAGGTTTGGTCCCCCAGTTTCTTTTGAATT
AGCTGCTGAGCATTGATCCCCTATTATCTCTAATTTGGTATGTCTGGTGT
ATCTAACAAACCTACAGGACCAAGCGCATATGCAGATGATGCTCGCTAAC
ACCTCATCCACCGCGTTGACCTACAACGCTACCTACGATGATCTCTCGCG
GCCGTCTCAAGGCCCCGCCAACCCCTTCAAACCTGCCGGACCAGCGAATG
GTCTCAAGCGCAAGAATGTCCCGACCGGTTTCGCCGAAGAAGCAGCCATC
AGTGAGGCGACCTTCGCCGCGCAACACCGCACCTTCCAGAGTCTAGGCTA
CACGCGCAACCCTGGTCTCCCGGGTCAATTTGTCGGCAATCTTGATAACG
CAGCTCAATTCGGTGGCCGCGATGTCATCCAGATGAAACCCTCCAAGGAG
GCATCTGCAGCGCTGCGCGCGAAACGGCAGAAGAAGGGCGACCCCAGCAT
CGTGGAAGGTGAAGGTGCCTACCTCGGCCCATGGGCGAAATACCAACGCG
AGGAGGTTTACGAAGAGGAGGCCGCCGAAGAGGACCGCGAACTTGCTAGC
GATGAGGAATACGTTGAGGTCGATGAAGAGGAAGACCTGGCACCATCGGC
CATGCCTGCCATGAGCAAAGAAGCCACCGACTACCAAGACGACACGACCA
AGGTCGAATCCACCGAATTCCACGGCACAGAGCAGTTCGACTACCTGGGC
CGCACGTACATGCACGTTCCTCAAGATCTGGACATCGACCTCCGCAAAGA
CCCCGGCAGCGCCAAGAACTTCATCCCCAAGAAACTCATCCATACCTGGA
AATCGCACACCAAAGCCATCACCTCGCTCCGCTTCTTCCCCCGCTCCGGC
CACCTCCTCCTCTCCTCCGCCGCCGACGGCAAAGCCAAGATTTGGGACGC
CTACCACTCACGCGAACTGCTGCGCACCTTCTCCGGCCACTCCAAGGCCA
TCACGGACACCGACTTCCACCCCAGCGGCACCACCTTCCTCACAGCCTCC
TACGACCGCCAAATCAAGCTCTGGGACACCGAATACGGCAAATGTCTCGG
ACGTTTCAGCACAGGCAAGACCCCCCATGTCATCCGCTTCAACCCCGGCG
CCGAACACTCGCACGAGTTCCTGGCCGGTATGTCCGACAAGAAGATCGTG
CAATTCGACACCCGCTCCGGCGAACTGGTCCAAGAATACGACCACCACTT
GGCAGCCATCAACACCATCACCTTTGTCGACGACAACCGCCGCTTCATCT
CCACCTCCGACGACAAATCCCTCCGCGCCTGGGAATACGGCATCCCCGTA
CCTATCAAATTCATCGCCGAACCATACATGTTCGCCCTCACCCGCGCCAC
CCCCCACCCCAACGGCAAATACGTCGCCTTCCAATCCGGCGATAACCAGA
TCGTCGTGTACGGCGCCACGGACAAATTCCGCCAGAACCGGAAGAAGAGT
TTCCGTGGCCACAACAATGCCGGCTACGCCATTGATATCAAGATCTCCCC
AGATGGACAGTTCATTGCTTCCGGTGATAGTGGCGGCTATGTCTGCTTCT
GGGATTGGAAAACAGGAAAAATGTACCATAAGATCCTGGCTGGTGGGAAG
GAAGGTGGCGCGACTACTTGTCTGGATTGGCATCCCCAGGAAACTAGCAA
GGTTGTTACGGGTGGGTTGGATGGGTTGATTAAATATTGGGATTAG
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Coding sequence (CDS) from alignment at An07:2052005..2053850-

>CBS51388_004837-T1 ID=CBS51388_004837-T1|Name=CBS51388_004837-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3504bp|location=Sequence derived from alignment at An07:2052005..2053850- (Aspergillus niger CBS 513.88)
GACCAAGCGCATATGCAGATGATGCTCGCTAACACCTCATCCACCGCGTT
GACCTACAACGCTACCTACGATGATCTCTCGCGGCCGTCTCAAGGCCCCG
CCAACCCCTTCAAACCTGCCGGACCAGCGAATGGTCTCAAGCGCAAGAAT
GTCCCGACCGGTTTCGCCGAAGAAGCAGCCATCAGTGAGGCGACCTTCGC
CGCGCAACACCGCACCTTCCAGAGTCTAGGCTACACGCGCAACCCTGGTC
TCCCGGGTCAATTTGTCGGCAATCTTGATAACGCAGCTCAATTCGGTGGC
CGCGATGTCATCCAGATGAAACCCTCCAAGGAGGCATCTGCAGCGCTGCG
CGCGAAACGGCAGAAGAAGGGCGACCCCAGCATCGTGGAAGGTGAAGGTG
CCTACCTCGGCCCATGGGCGAAATACCAACGCGAGGAGGTTTACGAAGAG
GAGGCCGCCGAAGAGGACCGCGAACTTGCTAGCGATGAGGAATACGTTGA
GGTCGATGAAGAGGAAGACCTGGCACCATCGGCCATGCCTGCCATGAGCA
AAGAAGCCACCGACTACCAAGACGACACGACCAAGGTCGAATCCACCGAA
TTCCACGGCACAGAGCAGTTCGACTACCTGGGCCGCACGTACATGCACGT
TCCTCAAGATCTGGACATCGACCTCCGCAAAGACCCCGGCAGCGCCAAGA
ACTTCATCCCCAAGAAACTCATCCATACCTGGAAATCGCACACCAAAGCC
ATCACCTCGCTCCGCTTCTTCCCCCGCTCCGGCCACCTCCTCCTCTCCTC
CGCCGCCGACGGCAAAGCCAAGATTTGGGACGCCTACCACTCACGCGAAC
TGCTGCGCACCTTCTCCGGCCACTCCAAGGCCATCACGGACACCGACTTC
CACCCCAGCGGCACCACCTTCCTCACAGCCTCCTACGACCGCCAAATCAA
GCTCTGGGACACCGAATACGGCAAATGTCTCGGACGTTTCAGCACAGGCA
AGACCCCCCATGTCATCCGCTTCAACCCCGGCGCCGAACACTCGCACGAG
TTCCTGGCCGGTATGTCCGACAAGAAGATCGTGCAATTCGACACCCGCTC
CGGCGAACTGGTCCAAGAATACGACCACCACTTGGCAGCCATCAACACCA
TCACCTTTGTCGACGACAACCGCCGCTTCATCTCCACCTCCGACGACAAA
TCCCTCCGCGCCTGGGAATACGGCATCCCCGTACCTATCAAATTCATCGC
CGAACCATACATGTTCGCCCTCACCCGCGCCACCCCCCACCCCAACGGCA
AATACGTCGCCTTCCAATCCGGCGATAACCAGATCGTCGTGTACGGCGCC
ACGGACAAATTCCGCCAGAACCGGAAGAAGAGTTTCCGTGGCCACAACAA
TGCCGGCTACGCCATTGATATCAAGATCTCCCCAGATGGACAGTTCATTG
CTTCCGGTGATAGTGGCGGCTATGTCTGCTTCTGGGATTGGAAAACAGGA
AAAATGTACCATAAGATCCTGGCTGGTGGGAAGGAAGGTGGCGCGACTAC
TTGTCTGGATTGGCATCCCCAGGAAACTAGCAAGGTTGTTACGGGTGGGT
TGGATGGGTTGATTAAATATTGGGATTAGATGGCATCATTACTCGGCGCA
GGCTACGAGTCTAGCGATGATGACTCGGCCAAGCCCACGCAAGTCCAACC
TACGGTGCCCTCAGCGACTACGATCGTCGCGGCGCCTGAAGTGAACACAG
AGGACCAAGCGCATATGCAGATGATGCTCGCTAACACCTCATCCACCGCG
TTGACCTACAACGCTACCTACGATGATCTCTCGCGGCCGTCTCAAGGCCC
CGCCAACCCCTTCAAACCTGCCGGACCAGCGAATGGTCTCAAGCGCAAGA
ATGTCCCGACCGGTTTCGCCGAAGAAGCAGCCATCAGTGAGGCGACCTTC
GCCGCGCAACACCGCACCTTCCAGAGTCTAGGCTACACGCGCAACCCTGG
TCTCCCGGGTCAATTTGTCGGCAATCTTGATAACGCAGCTCAATTCGGTG
GCCGCGATGTCATCCAGATGAAACCCTCCAAGGAGGCATCTGCAGCGCTG
CGCGCGAAACGGCAGAAGAAGGGCGACCCCAGCATCGTGGAAGGTGAAGG
TGCCTACCTCGGCCCATGGGCGAAATACCAACGCGAGGAGGTTTACGAAG
AGGAGGCCGCCGAAGAGGACCGCGAACTTGCTAGCGATGAGGAATACGTT
GAGGTCGATGAAGAGGAAGACCTGGCACCATCGGCCATGCCTGCCATGAG
CAAAGAAGCCACCGACTACCAAGACGACACGACCAAGGTCGAATCCACCG
AATTCCACGGCACAGAGCAGTTCGACTACCTGGGCCGCACGTACATGCAC
GTTCCTCAAGATCTGGACATCGACCTCCGCAAAGACCCCGGCAGCGCCAA
GAACTTCATCCCCAAGAAACTCATCCATACCTGGAAATCGCACACCAAAG
CCATCACCTCGCTCCGCTTCTTCCCCCGCTCCGGCCACCTCCTCCTCTCC
TCCGCCGCCGACGGCAAAGCCAAGATTTGGGACGCCTACCACTCACGCGA
ACTGCTGCGCACCTTCTCCGGCCACTCCAAGGCCATCACGGACACCGACT
TCCACCCCAGCGGCACCACCTTCCTCACAGCCTCCTACGACCGCCAAATC
AAGCTCTGGGACACCGAATACGGCAAATGTCTCGGACGTTTCAGCACAGG
CAAGACCCCCCATGTCATCCGCTTCAACCCCGGCGCCGAACACTCGCACG
AGTTCCTGGCCGGTATGTCCGACAAGAAGATCGTGCAATTCGACACCCGC
TCCGGCGAACTGGTCCAAGAATACGACCACCACTTGGCAGCCATCAACAC
CATCACCTTTGTCGACGACAACCGCCGCTTCATCTCCACCTCCGACGACA
AATCCCTCCGCGCCTGGGAATACGGCATCCCCGTACCTATCAAATTCATC
GCCGAACCATACATGTTCGCCCTCACCCGCGCCACCCCCCACCCCAACGG
CAAATACGTCGCCTTCCAATCCGGCGATAACCAGATCGTCGTGTACGGCG
CCACGGACAAATTCCGCCAGAACCGGAAGAAGAGTTTCCGTGGCCACAAC
AATGCCGGCTACGCCATTGATATCAAGATCTCCCCAGATGGACAGTTCAT
TGCTTCCGGTGATAGTGGCGGCTATGTCTGCTTCTGGGATTGGAAAACAG
GAAAAATGTACCATAAGATCCTGGCTGGTGGGAAGGAAGGTGGCGCGACT
ACTTGTCTGGATTGGCATCCCCAGGAAACTAGCAAGGTTGTTACGGGTGG
GTTGGATGGGTTGATTAAATATTGGGATTAGATGGCATCATTACTCGGCG
CAGGCTACGAGTCTAGCGATGATGACTCGGCCAAGCCCACGCAAGTCCAA
CCTACGGTGCCCTCAGCGACTACGATCGTCGCGGCGCCTGAAGTGAACAC
AGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004837CBS51388_004837Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004837-T1CBS51388_004837-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004837-T1.cdsCBS51388_004837-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004837-T1.exon2CBS51388_004837-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004837-T1.exon1CBS51388_004837-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262A6N
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:2052005..2053850 -
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