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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:2097758..2099108+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004855-T1 ID=CBS51388_004855-T1|Name=CBS51388_004855-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1351bp|location=Sequence derived from alignment at An07:2097758..2099108+ (Aspergillus niger CBS 513.88)
ATGTTCGACACTGTTTGCACCCTTCCGCTATCGGCGGACCTGTTCTCCCA
GGCTCTGCATCCCAAGGAACCCGTCGTGTCCGTGGGTCTCTCCTCCGGGC
ATGTCCAGACATTCCGACTCCCCACCGACGAAGCGGCCAGCGACGACGAC
GAGACGTCAAATGCCTCGTCACGCAATGGCAGAGGACACATTGATACGAT
GTGGCGGACGAGACGCCACAAGGGTAGCTGCCGGTGCTTGACGTTTGGAA
TTGATGGCGAGACGCTCTATTCGGCCGGCACGGACGGGCTGATCAAGGCC
GCAAAGGCGGAGACGGGAGTCGTGGAAAACAAGATCGCTATTCCTACGGA
AAAGAATGGGTAGGAGATAAGCCCCTTTTATATGTGCTTGAAGGGAGGAG
AGGACTCAATGGCTCATTGTATTCGCTTTTAGATCCATCGATGCTCCCAC
CATCATTCATGCGCTTTCCCCTCAGACCCTCCTTCTTGCGACCGATTCCA
GCGCCCTCCACCTCTACGATCTCCGCATACCCTACTCCAAGGTTTCCGCG
AAGCCTGAACAATCTCATCACCCTCACGACGATTATGTTTCGTCGCTTAC
GCCTCTTCCGGCCTCTGATACTAGCACCTCGGGGTTCAGCAAGCAATGGG
TGACGACGGGTGGGACGACCCTGGCAGTTACGGATTTGCGACGGGGTGTG
CTTGTTCGCAGCGAGGATCAGGAAGAGGAGTTGATCAGTTCGACGTACAT
TGGCGGATTGGCGGCCAGTGGCACGAGTCGCGGCGAGAAGGTGCTTGTGG
GGGGTTCTGGCGGTGTCCTTACGCTTTGGGAGAAGGGCGCGTGGGATGAC
CAGGACGAGCGGATCTATGTGGAGCGTGGAGGAGGTGGTGGAGAGTCCCT
GGAGACCATGGCTGTTCTGCCGGATGAATTGGGTAAGGGCAAGGTGGTCG
CTGTTGGTCTGGGCAATGGTCGGGTCAAGTTTGTGCGGATCGGCGCTAAC
AAGGTTGCCGCGGAGGTTATGCATGATGAGACTGAGGGCGTGATTGGCCT
GGGCTTTGACGTTGAGGGGCGCATGGTTACTGGTGGTGGACAGGTGGTGA
AGGTTTGGCATGAGGCTGTTGTTGGCGCTGATAGGTACGGGGCGATGCCG
GGGGAGAAGCGCATGTACGGAGACAGTGACGATAGCGATGAAGGTGACGA
CAGTGATGATGACTCGGATGATAGCGATGCCGGTGGCCGCCAGGACAAGC
CGCAGAACAAGCGCAAGAAGACAAAAGCCAAGGGCAAGGGTGGGCAGCAA
ATTATGGCTTTCCATGACTTGGATTCAATGGAATCGAGTGTGGTTTATTG
A back to topCoding sequence (CDS) from alignment at An07:2097758..2099108+ >CBS51388_004855-T1 ID=CBS51388_004855-T1|Name=CBS51388_004855-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2556bp|location=Sequence derived from alignment at An07:2097758..2099108+ (Aspergillus niger CBS 513.88)
ATGTTCGACACTGTTTGCACCCTTCCGCTATCGGCGGACCTGTTCTCCCA
GGCTCTGCATCCCAAGGAACCCGTCGTGTCCGTGGGTCTCTCCTCCGGGC
ATGTCCAGACATTCCGACTCCCCACCGACGAAGCGGCCAGCGACGACGAC
GAGACGTCAAATGCCTCGTCACGCAATGGCAGAGGACACATTGATACGAT
GTGGCGGACGAGACGCCACAAGGGTAGCTGCCGGTGCTTGACGTTTGGAA
TTGATGGCGAGACGCTCTATTCGGCCGGCACGGACGGGCTGATCAAGGCC
GCAAAGGCGGAGACGGGAGTCGTGGAAAACAAGATCGCTATTCCTACGGA
AAAGAATGGATCCATCGATGCTCCCACCATCATTCATGCGCTTTCCCCTC
AGACCCTCCTTCTTGCGACCGATTCCAGCGCCCTCCACCTCTACGATCTC
CGCATACCCTACTCCAAGGTTTCCGCGAAGCCTGAACAATCTCATCACCC
TCACGACGATTATGTTTCGTCGCTTACGCCTCTTCCGGCCTCTGATACTA
GCACCTCGGGGTTCAGCAAGCAATGGGTGACGACGGGTGGGACGACCCTG
GCAGTTACGGATTTGCGACGGGGTGTGCTTGTTCGCAGCGAGGATCAGGA
AGAGGAGTTGATCAGTTCGACGTACATTGGCGGATTGGCGGCCAGTGGCA
CGAGTCGCGGCGAGAAGGTGCTTGTGGGGGGTTCTGGCGGTGTCCTTACG
CTTTGGGAGAAGGGCGCGTGGGATGACCAGGACGAGCGGATCTATGTGGA
GCGTGGAGGAGGTGGTGGAGAGTCCCTGGAGACCATGGCTGTTCTGCCGG
ATGAATTGGGTAAGGGCAAGGTGGTCGCTGTTGGTCTGGGCAATGGTCGG
GTCAAGTTTGTGCGGATCGGCGCTAACAAGGTTGCCGCGGAGGTTATGCA
TGATGAGACTGAGGGCGTGATTGGCCTGGGCTTTGACGTTGAGGGGCGCA
TGGTTACTGGTGGTGGACAGGTGGTGAAGGTTTGGCATGAGGCTGTTGTT
GGCGCTGATAGGTACGGGGCGATGCCGGGGGAGAAGCGCATGTACGGAGA
CAGTGACGATAGCGATGAAGGTGACGACAGTGATGATGACTCGGATGATA
GCGATGCCGGTGGCCGCCAGGACAAGCCGCAGAACAAGCGCAAGAAGACA
AAAGCCAAGGGCAAGGGTGGGCAGCAAATTATGGCTTTCCATGACTTGGA
TTCAATGGAATCGAGTGTGGTTTATTGAATGTTCGACACTGTTTGCACCC
TTCCGCTATCGGCGGACCTGTTCTCCCAGGCTCTGCATCCCAAGGAACCC
GTCGTGTCCGTGGGTCTCTCCTCCGGGCATGTCCAGACATTCCGACTCCC
CACCGACGAAGCGGCCAGCGACGACGACGAGACGTCAAATGCCTCGTCAC
GCAATGGCAGAGGACACATTGATACGATGTGGCGGACGAGACGCCACAAG
GGTAGCTGCCGGTGCTTGACGTTTGGAATTGATGGCGAGACGCTCTATTC
GGCCGGCACGGACGGGCTGATCAAGGCCGCAAAGGCGGAGACGGGAGTCG
TGGAAAACAAGATCGCTATTCCTACGGAAAAGAATGGATCCATCGATGCT
CCCACCATCATTCATGCGCTTTCCCCTCAGACCCTCCTTCTTGCGACCGA
TTCCAGCGCCCTCCACCTCTACGATCTCCGCATACCCTACTCCAAGGTTT
CCGCGAAGCCTGAACAATCTCATCACCCTCACGACGATTATGTTTCGTCG
CTTACGCCTCTTCCGGCCTCTGATACTAGCACCTCGGGGTTCAGCAAGCA
ATGGGTGACGACGGGTGGGACGACCCTGGCAGTTACGGATTTGCGACGGG
GTGTGCTTGTTCGCAGCGAGGATCAGGAAGAGGAGTTGATCAGTTCGACG
TACATTGGCGGATTGGCGGCCAGTGGCACGAGTCGCGGCGAGAAGGTGCT
TGTGGGGGGTTCTGGCGGTGTCCTTACGCTTTGGGAGAAGGGCGCGTGGG
ATGACCAGGACGAGCGGATCTATGTGGAGCGTGGAGGAGGTGGTGGAGAG
TCCCTGGAGACCATGGCTGTTCTGCCGGATGAATTGGGTAAGGGCAAGGT
GGTCGCTGTTGGTCTGGGCAATGGTCGGGTCAAGTTTGTGCGGATCGGCG
CTAACAAGGTTGCCGCGGAGGTTATGCATGATGAGACTGAGGGCGTGATT
GGCCTGGGCTTTGACGTTGAGGGGCGCATGGTTACTGGTGGTGGACAGGT
GGTGAAGGTTTGGCATGAGGCTGTTGTTGGCGCTGATAGGTACGGGGCGA
TGCCGGGGGAGAAGCGCATGTACGGAGACAGTGACGATAGCGATGAAGGT
GACGACAGTGATGATGACTCGGATGATAGCGATGCCGGTGGCCGCCAGGA
CAAGCCGCAGAACAAGCGCAAGAAGACAAAAGCCAAGGGCAAGGGTGGGC
AGCAAATTATGGCTTTCCATGACTTGGATTCAATGGAATCGAGTGTGGTT
TATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | WD repeat-containing protein jip5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:2097758..2099108 + |
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