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CBS51388_004865-T1, CBS51388_004865-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004865-T1
Unique NameCBS51388_004865-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:2137582..2139006+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004865-T1 ID=CBS51388_004865-T1|Name=CBS51388_004865-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1425bp|location=Sequence derived from alignment at An07:2137582..2139006+ (Aspergillus niger CBS 513.88)
ATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGC
CCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGC
ATGCTGAAAATGTCCCCCAGGTTCGTTGAGAGCTCCCTGGATATCCCGGA
TTGACCTCCGCAATGGCCCTGGCTAATGCGATTTCCATCTATCTACAGGA
GGATGACAAGCCCTTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGACCT
ACGAGATCGACCCTCCCCCGTACACCCTGGAGATCACCAAGAAGGAGCTC
AAGCAGATGTACTACGACATGGTTTCGATGAGGTATGGCCACCGTTTGGC
CCTTTGCTTTTTCTTTCCACAAGCCTCATGCAGAATCTAATCTATCGCTC
AGACGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATCAG
AGGTTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTATCG
AGCACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCCAC
GGTTTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAGCT
GCTCGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCACA
TGTTCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGGTC
CCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCCAC
CACCAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGTCT
TCGAGGCCTTCAACATGGCCAAGCTGTGGAACCTCCCCGTTCTGTTCGGT
TGTGAGAGTAAGTCATAGTCCTCACGCCACTCCATCCAAGACAGCCAAAG
CTAATTCCTTTTCTACTAGACAACAAGTACGGTATGGGTACCTCCGCCGC
TCGCTCCTCCGCCTTGACCGAGTACTACAAGCGTGGTCAGTACATCCCTG
GTATCAAGGTCAACGGCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAG
TACGGTAAGGACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTA
CGTCACCTACCGTTACGGTGGTCACTCCATGTCCGACCCCGGTACCACCT
ACCGTAGCCGTGAGGAGATCCAGCGCATGCGCAGCACCAACGACCCCATC
GCCGGTCTCAAGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAGGACGA
GCTCAAGTCCCTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCG
CCATCGCCGAGAAGATGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTC
GAGGACATCTACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCAC
TGTCGACGAGACCTTCTACTACTAG
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Coding sequence (CDS) from alignment at An07:2137582..2139006+

>CBS51388_004865-T1 ID=CBS51388_004865-T1|Name=CBS51388_004865-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4860bp|location=Sequence derived from alignment at An07:2137582..2139006+ (Aspergillus niger CBS 513.88)
ATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGC
CCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGC
ATGCTGAAAATGTCCCCCAGGAGGATGACAAGCCCTTCACTGTCCGCCTC
TCCGACGAGAGCTTCGAGACCTACGAGATCGACCCTCCCCCGTACACCCT
GGAGATCACCAAGAAGGAGCTCAAGCAGATGTACTACGACATGGTTTCGA
TGAGACGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATC
AGAGGTTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTAT
CGAGCACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCC
ACGGTTTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAG
CTGCTCGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCA
CATGTTCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGG
TCCCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCC
ACCACCAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGT
CTTCGAGGCCTTCAACATGGCCAAGCTGTGGAACCTCCCCGTTCTGTTCG
GTTGTGAGAACAACAAGTACGGTATGGGTACCTCCGCCGCTCGCTCCTCC
GCCTTGACCGAGTACTACAAGCGTGGTCAGTACATCCCTGGTATCAAGGT
CAACGGCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGTACGGTAAGG
ACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTACGTCACCTAC
CGTTACGGTGGTCACTCCATGTCCGACCCCGGTACCACCTACCGTAGCCG
TGAGGAGATCCAGCGCATGCGCAGCACCAACGACCCCATCGCCGGTCTCA
AGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAGGACGAGCTCAAGTCC
CTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGCCATCGCCGA
GAAGATGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTCGAGGACATCT
ACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACTGTCGACGAG
ACCTTCTACTACTAGATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCC
CTTGAGGCGTCAGGCCCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCG
ACGCCGCCTCGTCGCATGCTGAAAATGTCCCCCAGGAGGATGACAAGCCC
TTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGACCTACGAGATCGACCC
TCCCCCGTACACCCTGGAGATCACCAAGAAGGAGCTCAAGCAGATGTACT
ACGACATGGTTTCGATGAGACGCATGGAGATGGCCGCCGACCGTCTTTAC
AAGGAGAAGAAGATCAGAGGTTTCTGCCACTTGTCTACCGGTCAGGAAGC
CGTCGCCACCGGTATCGAGCACGCTATCACCCGCGACGACAAGGTCATCA
CTGCCTACCGTTGCCACGGTTTCGCCATGATGCGCGGTGGTACCGTCCGC
TCCATCATCGGTGAGCTGCTCGGTCGCCGTGAGGGTATCGCCTACGGAAA
GGGTGGTTCCATGCACATGTTCGCCCCCAACTTCTACGGCGGTAACGGTA
TCGTCGGTGCCCAGGTCCCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAG
TACAACGAGGAGCCCACCACCAGTATCGTCCTCTACGGTGACGGTGCCTC
CAACCAGGGTCAGGTCTTCGAGGCCTTCAACATGGCCAAGCTGTGGAACC
TCCCCGTTCTGTTCGGTTGTGAGAACAACAAGTACGGTATGGGTACCTCC
GCCGCTCGCTCCTCCGCCTTGACCGAGTACTACAAGCGTGGTCAGTACAT
CCCTGGTATCAAGGTCAACGGCATGGACGTCCTGGCCACCAAGGCCGCCG
TCAAGTACGGTAAGGACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTAC
GAGTACGTCACCTACCGTTACGGTGGTCACTCCATGTCCGACCCCGGTAC
CACCTACCGTAGCCGTGAGGAGATCCAGCGCATGCGCAGCACCAACGACC
CCATCGCCGGTCTCAAGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAG
GACGAGCTCAAGTCCCTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGA
GGTCGCCATCGCCGAGAAGATGCCCGCTCCCGAGAACACCTCCCGCATTC
TCTTCGAGGACATCTACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGT
CGCACTGTCGACGAGACCTTCTACTACTAGATGTTGTTCCGCGCTGCGGT
CCGTCAGTCCGCGCCCTTGAGGCGTCAGGCCCTCACTCCTCTTGCTCGTC
GCTCCGTCACCACCGACGCCGCCTCGTCGCATGCTGAAAATGTCCCCCAG
GAGGATGACAAGCCCTTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGAC
CTACGAGATCGACCCTCCCCCGTACACCCTGGAGATCACCAAGAAGGAGC
TCAAGCAGATGTACTACGACATGGTTTCGATGAGACGCATGGAGATGGCC
GCCGACCGTCTTTACAAGGAGAAGAAGATCAGAGGTTTCTGCCACTTGTC
TACCGGTCAGGAAGCCGTCGCCACCGGTATCGAGCACGCTATCACCCGCG
ACGACAAGGTCATCACTGCCTACCGTTGCCACGGTTTCGCCATGATGCGC
GGTGGTACCGTCCGCTCCATCATCGGTGAGCTGCTCGGTCGCCGTGAGGG
TATCGCCTACGGAAAGGGTGGTTCCATGCACATGTTCGCCCCCAACTTCT
ACGGCGGTAACGGTATCGTCGGTGCCCAGGTCCCCGTCGGTGCTGGTCTC
GCTTTCGCCCAGCAGTACAACGAGGAGCCCACCACCAGTATCGTCCTCTA
CGGTGACGGTGCCTCCAACCAGGGTCAGGTCTTCGAGGCCTTCAACATGG
CCAAGCTGTGGAACCTCCCCGTTCTGTTCGGTTGTGAGAACAACAAGTAC
GGTATGGGTACCTCCGCCGCTCGCTCCTCCGCCTTGACCGAGTACTACAA
GCGTGGTCAGTACATCCCTGGTATCAAGGTCAACGGCATGGACGTCCTGG
CCACCAAGGCCGCCGTCAAGTACGGTAAGGACTGGGCCGTGGCCGGCAAC
GGCCCCCTGGTCTACGAGTACGTCACCTACCGTTACGGTGGTCACTCCAT
GTCCGACCCCGGTACCACCTACCGTAGCCGTGAGGAGATCCAGCGCATGC
GCAGCACCAACGACCCCATCGCCGGTCTCAAGCAGAAGATCCTCGACTGG
AACGTCTGCTCCGAGGACGAGCTCAAGTCCCTCGACAAGGCCGCTCGTGC
CCACGTCGACGAGGAGGTCGCCATCGCCGAGAAGATGCCCGCTCCCGAGA
ACACCTCCCGCATTCTCTTCGAGGACATCTACGTCCGTGGCTCCGAGCCC
AAGTGGATGCGTGGTCGCACTGTCGACGAGACCTTCTACTACTAGATGTT
GTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGCCCTCA
CTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGCATGCT
GAAAATGTCCCCCAGGAGGATGACAAGCCCTTCACTGTCCGCCTCTCCGA
CGAGAGCTTCGAGACCTACGAGATCGACCCTCCCCCGTACACCCTGGAGA
TCACCAAGAAGGAGCTCAAGCAGATGTACTACGACATGGTTTCGATGAGA
CGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATCAGAGG
TTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTATCGAGC
ACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCCACGGT
TTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAGCTGCT
CGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCACATGT
TCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGGTCCCC
GTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCCACCAC
CAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGTCTTCG
AGGCCTTCAACATGGCCAAGCTGTGGAACCTCCCCGTTCTGTTCGGTTGT
GAGAACAACAAGTACGGTATGGGTACCTCCGCCGCTCGCTCCTCCGCCTT
GACCGAGTACTACAAGCGTGGTCAGTACATCCCTGGTATCAAGGTCAACG
GCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGTACGGTAAGGACTGG
GCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTACGTCACCTACCGTTA
CGGTGGTCACTCCATGTCCGACCCCGGTACCACCTACCGTAGCCGTGAGG
AGATCCAGCGCATGCGCAGCACCAACGACCCCATCGCCGGTCTCAAGCAG
AAGATCCTCGACTGGAACGTCTGCTCCGAGGACGAGCTCAAGTCCCTCGA
CAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGCCATCGCCGAGAAGA
TGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTCGAGGACATCTACGTC
CGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACTGTCGACGAGACCTT
CTACTACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0043231intracellular membrane-bounded organelle
Vocabulary: Biological Process
TermDefinition
GO:0006086acetyl-CoA biosynthetic process from pyruvate
Vocabulary: Molecular Function
TermDefinition
GO:0004739pyruvate dehydrogenase (acetyl-transferring) activity
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDA1CBS51388_004865Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004865-T1.exon1CBS51388_004865-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004865-T1.exon2CBS51388_004865-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004865-T1.exon3CBS51388_004865-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004865-T1.exon4CBS51388_004865-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004865-T1.cdsCBS51388_004865-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004865-T1CBS51388_004865-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262Q8D
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR017597
DBxrefInterPro:IPR001017
DBxrefPFAM:PF00676
Productalpha subunit of pyruvate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:2137582..2139006 +
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